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LacPavin_0818_WC40_scaffold_15340_prodigal-single.1__X__X__00348

Bact-Vir

LacPavin_0818_WC40_scaffold_15340_prodigal-single.1__X__X__00348

Identity

Kingdom:
phage

Quality

73.5 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 29-112
PDB
CATH (21)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1mufA01 2.20.110.10 Mainly Beta › Single Sheet › Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain › Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 0.79 59.0 5.31e-01 86.9% 58.4%
3buuB00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.70 57.0 4.16e-01 88.1% 35.9%
4ghbA00 2.40.160.190 Mainly Beta › Beta Barrel › Porin › 0.68 58.0 4.07e-01 92.9% 61.2%
3tzgA00 2.40.160.150 Mainly Beta › Beta Barrel › Porin › 0.63 57.0 4.08e-01 100.0% 59.0%
3gmvX00 3.10.450.730 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › BLIP domain 0.61 53.0 4.40e-01 100.0% 91.7%
1w94A00 3.40.50.10480 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Brix domain 0.59 44.0 3.58e-01 77.4% 98.7%
3hjhA02 3.30.2060.10 Alpha Beta › 2-Layer Sandwich › Penicillin-binding protein 1b fold › Penicillin-binding protein 1b domain 0.58 38.0 3.81e-01 83.3% 65.1%
1zxuA00 2.40.160.200 Mainly Beta › Beta Barrel › Porin › LURP1-related 0.57 48.0 3.84e-01 91.7% 50.0%
1x7dB01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.56 46.0 3.67e-01 89.3% 69.8%
3sluB01 3.10.450.350 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 40.0 3.91e-01 76.2% 100.0%
4ao8A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.54 47.0 3.49e-01 100.0% 98.3%
3l9rA01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.54 41.0 3.28e-01 83.3% 85.1%
2qzbA00 2.60.460.10 Mainly Beta › Sandwich › protein yfey like fold › protein yfey like domain 0.53 46.0 3.87e-01 100.0% 55.9%
4ge1C00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 43.0 3.30e-01 88.1% 56.5%
3ii7A00 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.53 45.0 3.21e-01 98.8% 47.6%
2xzhA00 2.130.10.110 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Clathrin heavy-chain terminal domain 0.53 43.0 2.94e-01 95.2% 55.3%
3tt2A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.52 43.0 2.94e-01 90.5% 95.6%
1v0fA02 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.52 44.0 3.01e-01 100.0% 40.7%
2wozA00 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.52 44.0 3.08e-01 98.8% 45.0%
2ns9A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 45.0 3.73e-01 96.4% 60.1%
4ifaA01 3.40.33.10 Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP 0.51 45.0 3.16e-01 98.8% 33.7%
ECOD (81)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5081937 77.2.1.0 beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N 0.88 76.0 7.26e-01 98.8% 80.0%
3965839 77.1.1.6 beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › MORN_2 0.85 77.0 6.10e-01 95.2% 62.6%
3976807 77.1.1.6 beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › MORN_2 0.84 75.0 5.38e-01 95.2% 45.9%
3968348 77.2.1.5 beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN_2 0.83 78.0 6.14e-01 100.0% 63.7%
3386526 77.1.1.6 beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › MORN_2 0.82 77.0 5.98e-01 98.8% 65.5%
4050277 77.2.1.4 beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN+SET7_N 0.81 70.0 5.43e-01 100.0% 44.6%
3322799 77.2.1.1 beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.81 66.0 5.50e-01 98.8% 52.1%
3976809 77.1.1.6 beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › MORN_2 0.80 75.0 5.72e-01 98.8% 58.9%
3287702 77.1.1.0 beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein 0.80 70.0 6.19e-01 100.0% 67.8%
3760058 77.2.1.4 beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN+SET7_N 0.79 68.0 5.56e-01 100.0% 52.0%
4029170 77.2.1.0 beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N 0.73 60.0 5.70e-01 100.0% 75.0%
3422547 77.2.1.1 beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.73 60.0 5.21e-01 100.0% 59.2%
3494432 77.2.1.1 beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.72 51.0 4.66e-01 98.8% 55.3%
4200177 3894.1.1.3 beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › GtfB_M 0.72 61.0 5.23e-01 100.0% 59.2%
3711519 77.2.1.1 beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.71 62.0 4.94e-01 100.0% 47.6%
3708791 77.3.1.3 beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › MORN 0.71 57.0 4.24e-01 100.0% 34.8%
2162624 3894.1.1.1 beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › Asp1 0.71 58.0 5.06e-01 100.0% 59.5%
2723017 3894.1.1.0 beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain 0.71 60.0 5.29e-01 94.0% 79.0%
2631766 3894.1.1.1 beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › Asp1 0.70 57.0 4.99e-01 100.0% 59.5%
3499122 77.2.1.1 beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.69 59.0 4.34e-01 95.2% 52.9%
3770241 77.2.1.1 beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.69 59.0 5.31e-01 95.2% 67.8%
1780243 3894.1.1.3 beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › GtfB_M 0.68 58.0 4.08e-01 100.0% 30.6%
3416878 77.3.1.3 beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › MORN 0.68 58.0 4.53e-01 95.2% 70.8%
3615285 77.2.1.1 beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.68 58.0 5.53e-01 100.0% 79.0%
3716096 77.2.1.1 beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.68 58.0 4.93e-01 100.0% 57.8%
2722572 3894.1.1.3 beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › GtfB_M 0.68 58.0 4.99e-01 95.2% 74.8%
4030599 77.2.1.1 beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.68 60.0 4.97e-01 96.4% 71.3%
3600402 77.2.1.0 beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N 0.68 55.0 3.58e-01 100.0% 19.2%
4030440 77.2.1.1 beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.67 59.0 4.15e-01 96.4% 38.8%
4024499 77.2.1.1 beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.67 55.0 4.55e-01 100.0% 50.7%
4390281 3894.1.1.3 beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › GtfB_M 0.67 57.0 5.10e-01 95.2% 90.8%
4030530 77.2.1.1 beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.67 54.0 4.82e-01 100.0% 62.5%
3607876 77.2.1.1 beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.67 53.0 3.64e-01 100.0% 23.9%
3610069 77.2.1.1 beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.66 56.0 4.19e-01 95.2% 54.9%
3594212 77.2.1.1 beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.65 56.0 4.57e-01 95.2% 74.4%
4107854 77.2.1.1 beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.65 54.0 5.02e-01 100.0% 73.3%
3598916 77.2.1.0 beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N 0.65 57.0 4.52e-01 100.0% 52.2%
3601033 77.2.1.0 beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N 0.64 53.0 4.55e-01 94.0% 65.5%
3761944 77.2.1.1 beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.64 55.0 3.78e-01 96.4% 86.9%
3595247 77.2.1.0 beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N 0.63 53.0 4.67e-01 95.2% 74.6%
3308166 77.2.1.1 beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.63 54.0 4.73e-01 96.4% 73.8%
3718320 77.2.1.1 beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.63 52.0 3.65e-01 95.2% 32.0%
4029687 77.2.1.0 beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N 0.62 49.0 4.32e-01 96.4% 56.2%
3594838 77.2.1.0 beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N 0.62 55.0 4.81e-01 100.0% 83.1%
4003791 77.2.1.1 beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.62 53.0 4.22e-01 96.4% 56.1%
3707128 77.2.1.1 beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.62 53.0 4.68e-01 95.2% 76.8%
3592336 77.2.1.0 beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N 0.62 53.0 4.75e-01 95.2% 78.3%
3311784 77.2.1.1 beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.62 53.0 4.71e-01 96.4% 83.2%
3714740 77.2.1.1 beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.62 55.0 4.88e-01 97.6% 75.0%
3719923 77.3.1.3 beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › MORN 0.62 53.0 4.64e-01 96.4% 73.1%
3844285 77.2.1.1 beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.62 54.0 4.45e-01 98.8% 64.5%
4997755 844.1.1.2 beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR 0.62 51.0 3.91e-01 88.1% 48.3%
3890448 77.3.1.3 beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › MORN 0.62 53.0 4.79e-01 98.8% 81.7%
3483806 295.1.1.3 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.60 41.0 3.43e-01 71.4% 85.3%
5041496 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.60 54.0 3.75e-01 100.0% 88.7%
3715243 77.2.1.0 beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N 0.60 51.0 4.52e-01 98.8% 96.9%
3591199 77.2.1.0 beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N 0.59 49.0 4.54e-01 100.0% 69.6%
3600949 77.2.1.0 beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N 0.59 51.0 4.45e-01 98.8% 72.6%
3701923 77.2.1.1 beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.59 52.0 4.60e-01 98.8% 84.0%
3367547 844.1.1.4 beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Scramblase 0.59 52.0 3.98e-01 98.8% 47.9%
4934439 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.58 48.0 3.00e-01 89.3% 25.5%
3612462 77.3.1.3 beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › MORN 0.58 50.0 4.55e-01 98.8% 79.1%
3484806 77.2.1.1 beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.58 50.0 4.86e-01 100.0% 96.8%
3624211 844.1.1.0 beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain 0.57 47.0 3.80e-01 98.8% 46.7%
4980820 844.1.1.2 beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR 0.55 48.0 3.75e-01 96.4% 53.9%
5013467 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.54 46.0 3.20e-01 98.8% 42.3%
3583836 5.1.3.135 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1, Kelch_KLHDC2_KLHL20_DRC7, Beta-prop_ATRN-LZTR1 0.53 42.0 2.92e-01 90.5% 51.0%
3720166 5.1.3.137 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1, Kelch_2, Kelch_KLHDC2_KLHL20_DRC7 0.53 45.0 3.10e-01 100.0% 46.5%
4498349 71.1.1.2 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA 0.53 47.0 3.70e-01 100.0% 92.8%
3613130 5.1.3.117 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1+Kelch_KLHDC2_KLHL20_DRC7 0.53 43.0 2.91e-01 95.2% 28.2%
5074996 844.1.1.2 beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR 0.52 44.0 3.60e-01 98.8% 47.6%
3940153 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.52 44.0 3.11e-01 98.8% 45.4%
3626934 5.1.3.115 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_ATRN-LZTR1 0.52 44.0 3.02e-01 98.8% 45.0%
3889109 5.1.3.135 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1, Kelch_KLHDC2_KLHL20_DRC7, Beta-prop_ATRN-LZTR1 0.52 44.0 3.08e-01 98.8% 43.4%
5045339 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.52 44.0 3.02e-01 98.8% 47.5%
3593567 5.1.3.6 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 0.52 41.0 2.82e-01 90.5% 42.5%
5037531 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.52 45.0 2.69e-01 98.8% 22.2%
3492539 5.1.3.6 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 0.52 44.0 3.58e-01 100.0% 84.0%
3613891 5.1.4.341 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT140_2nd 0.51 42.0 2.87e-01 98.8% 50.4%
3799341 3297.1.1.25 extended segments › Helical hairpin in Ndc80 › Helical hairpin in Ndc80 › Helical hairpin in Ndc80 › WD40_RFWD3 0.51 41.0 2.80e-01 94.0% 38.1%
3364063 295.1.1.3 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.50 36.0 3.04e-01 73.8% 51.4%