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LacPavin_0818_WC40_scaffold_193576_prodigal-single.1__X__X__00063
Bact-VirLacPavin_0818_WC40_scaffold_193576_prodigal-single.1__X__X__00063
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-157
Domain cluster:
rep: sw_7_scaffold_1_prodigal-single.1__X__X__00357__D2-137
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ib8A02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.79 | 35.0 | 5.42e-01 | 70.3% | 100.0% |
| 4qqgG00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 35.0 | 5.10e-01 | 75.5% | 100.0% |
| 3askA02 | 2.30.30.1150 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 35.0 | 3.60e-01 | 73.5% | 49.7% |
| 3cpfA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 31.0 | 4.60e-01 | 76.8% | 100.0% |
| 2e5wA01 | 2.30.140.10 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain | 0.65 | 24.0 | 3.92e-01 | 74.8% | 92.9% |
| 2o07A01 | 2.30.140.10 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain | 0.64 | 24.0 | 3.77e-01 | 72.3% | 88.1% |
| 2lqkA00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.64 | 28.0 | 4.09e-01 | 71.0% | 91.4% |
| 1khiA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 32.0 | 4.44e-01 | 82.6% | 100.0% |
| 1ixdA00 | 2.30.30.190 | Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain | 0.60 | 35.0 | 4.26e-01 | 75.5% | 87.5% |
| 2ew0A00 | 3.40.1740.10 | Alpha Beta › 3-Layer(aba) Sandwich › VC0467-like › VC0467-like | 0.56 | 40.0 | 3.87e-01 | 73.5% | 88.6% |
| 1gutA00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.55 | 21.0 | 3.11e-01 | 76.1% | 79.1% |
| 2gs5A01 | 3.40.1740.10 | Alpha Beta › 3-Layer(aba) Sandwich › VC0467-like › VC0467-like | 0.55 | 42.0 | 3.99e-01 | 80.6% | 89.9% |
| 7xpkA01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.54 | 39.0 | 4.08e-01 | 75.5% | 79.3% |
| 1b9mA03 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.54 | 22.0 | 3.20e-01 | 70.3% | 81.7% |
| 2ox7A02 | 2.30.30.290 | Mainly Beta › Roll › SH3 type barrels. › YopX-like domains | 0.52 | 23.0 | 3.29e-01 | 71.6% | 89.9% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4118552 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.83 | 40.0 | 5.90e-01 | 74.8% | 100.0% |
| 4168737 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.82 | 40.0 | 5.82e-01 | 74.8% | 100.0% |
| 3942912 | 4.1.1.323 ↗ | beta barrels › SH3 › SH3 › SH3 › WYL | 0.82 | 39.0 | 5.41e-01 | 72.3% | 87.1% |
| 3978997 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.81 | 39.0 | 5.06e-01 | 72.3% | 77.9% |
| 4141828 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.81 | 39.0 | 5.78e-01 | 74.8% | 100.0% |
| 3519122 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.80 | 38.0 | 5.08e-01 | 72.3% | 81.1% |
| 3959770 | 4.31.1.0 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 | 0.80 | 37.0 | 4.95e-01 | 71.6% | 78.9% |
| 3286662 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.80 | 37.0 | 4.65e-01 | 72.9% | 71.0% |
| 3289944 | 4.1.1.323 ↗ | beta barrels › SH3 › SH3 › SH3 › WYL | 0.79 | 37.0 | 4.98e-01 | 72.3% | 80.0% |
| 4120629 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.79 | 39.0 | 5.68e-01 | 76.1% | 100.0% |
| 4545520 | 4.7.1.7 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › WYL | 0.79 | 38.0 | 5.28e-01 | 72.3% | 88.2% |
| 3972550 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.78 | 38.0 | 4.76e-01 | 72.3% | 74.0% |
| 3281271 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.78 | 37.0 | 4.95e-01 | 72.9% | 81.1% |
| 3953109 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.78 | 38.0 | 4.98e-01 | 72.9% | 80.0% |
| 3280641 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.76 | 37.0 | 4.63e-01 | 72.3% | 74.0% |
| 4358168 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.76 | 40.0 | 4.73e-01 | 74.2% | 72.7% |
| 3283097 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.76 | 38.0 | 4.51e-01 | 72.3% | 70.0% |
| 4387099 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.74 | 39.0 | 5.40e-01 | 71.6% | 100.0% |
| 3932647 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.71 | 38.0 | 4.97e-01 | 80.6% | 92.9% |
| 3738641 | 4.1.1.102 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_3 | 0.70 | 34.0 | 4.72e-01 | 74.2% | 94.7% |
| 3585492 | 4.1.1.103 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_12 | 0.69 | 37.0 | 4.40e-01 | 94.2% | 74.5% |
| 4936914 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.69 | 39.0 | 4.66e-01 | 98.1% | 81.9% |
| 3570368 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.69 | 43.0 | 5.20e-01 | 94.2% | 97.0% |
| 4565130 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 41.0 | 5.09e-01 | 91.0% | 100.0% |
| 3730229 | 4.1.1.102 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_3 | 0.66 | 31.0 | 4.37e-01 | 74.2% | 92.0% |
| 3806777 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.65 | 32.0 | 4.52e-01 | 71.6% | 97.3% |
| 5032454 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.64 | 39.0 | 4.21e-01 | 98.1% | 70.8% |
| 3790897 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 41.0 | 5.00e-01 | 89.7% | 100.0% |
| 3615426 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.63 | 38.0 | 3.90e-01 | 98.1% | 61.3% |
| 4300895 | 4.11.1.6 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › PF31032 | 0.63 | 38.0 | 3.99e-01 | 98.1% | 65.7% |
| 3924619 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 41.0 | 4.64e-01 | 92.3% | 87.5% |
| 3715285 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.62 | 37.0 | 3.80e-01 | 90.3% | 60.0% |
| 3636503 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.59 | 28.0 | 4.07e-01 | 70.3% | 100.0% |
| 3719783 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 33.0 | 4.18e-01 | 73.5% | 92.6% |
| 5012425 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.58 | 39.0 | 4.16e-01 | 88.4% | 76.4% |
| 3642926 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.57 | 40.0 | 3.75e-01 | 94.8% | 60.0% |
| 3630782 | 4.1.1.51 ↗ | beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor | 0.56 | 35.0 | 3.68e-01 | 75.5% | 67.6% |
| 4022025 | 4.1.1.51 ↗ | beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor | 0.55 | 35.0 | 3.67e-01 | 80.0% | 69.0% |
| 3829476 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.54 | 39.0 | 3.74e-01 | 90.3% | 64.6% |
| 3713569 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 32.0 | 3.52e-01 | 78.7% | 70.8% |
| 3469949 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 36.0 | 3.65e-01 | 75.5% | 66.9% |
| 3740221 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.52 | 37.0 | 3.74e-01 | 97.4% | 70.6% |
| 4002655 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 38.0 | 3.99e-01 | 74.2% | 97.9% |
| 5080017 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.52 | 44.0 | 4.45e-01 | 96.8% | 88.7% |
D2
high
residues 168-226