LacPavin_0818_WC40_scaffold_193576_prodigal-single.1XX__00171

Bact-Vir

LacPavin_0818_WC40_scaffold_193576_prodigal-single.1__X__X__00171

Identity

78.5 mean pLDDT

Singleton — not in a non-trivial cluster

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-56

PDB

Domain cluster: representative

CATH (6)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4d6wB02	6.10.140.740	Special › Helix non-globular › Helix Hairpins ›	0.72	64.0	5.30e-01	98.1%	62.0%
2pvqA02	1.20.1050.10	Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 ›	0.68	55.0	4.46e-01	90.7%	47.2%
1wrdA00	1.20.58.160	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.67	51.0	4.23e-01	83.3%	50.0%
4hwhE00	1.20.58.120	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain	0.64	50.0	4.33e-01	87.0%	54.5%
2lrmA00	1.10.890.30	Mainly Alpha › Orthogonal Bundle › 10k-s Protein, Hypothetical Protein A; Chain A › YmgD protein	0.60	42.0	3.61e-01	79.6%	47.6%
3a06B03	1.10.1740.10	Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif	0.54	47.0	4.04e-01	100.0%	94.3%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3387484	375.1.9.0 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Zinc-nucleated domain of serine integrase	0.82	65.0	5.54e-01	85.2%	58.8%
3952366	4970.1.1.0 ↗	alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I	0.66	57.0	5.49e-01	92.6%	85.0%
3743120	109.4.1.80 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RRN3	0.64	48.0	3.11e-01	87.0%	16.4%