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LacPavin_0818_WC40_scaffold_193576_prodigal-single.1__X__X__00188

Bact-Vir

LacPavin_0818_WC40_scaffold_193576_prodigal-single.1__X__X__00188

Identity

Kingdom:
phage

Quality

81.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-141_186-192_559-609
PDB
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF01555.25 best N6_N4_Mtase 67.0 3.50e-18 64.4% 52.0%
PF01555.25 N6_N4_Mtase 56.7 4.80e-15 23.7% 19.9%
CATH (26)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1g60B00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.88 85.0 7.91e-01 98.5% 97.8%
1booA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.88 85.0 7.27e-01 99.5% 94.7%
2zigA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.85 83.0 7.65e-01 100.0% 96.2%
1eg2A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.85 82.0 7.14e-01 100.0% 92.2%
5hfjC00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.78 74.0 7.33e-01 98.5% 99.0%
7f4oA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.71 54.0 5.42e-01 78.4% 82.7%
3mb5A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.68 48.0 4.81e-01 97.4% 71.5%
2nxcA03 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.65 44.0 4.93e-01 97.9% 86.9%
3e05B00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.65 46.0 4.64e-01 97.4% 71.9%
1xdzA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.59 42.0 3.97e-01 97.9% 58.8%
3e23A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.57 42.0 4.19e-01 97.4% 73.2%
2okcA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.57 41.0 3.51e-01 73.7% 46.7%
3lpmA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.56 45.0 4.33e-01 97.9% 75.3%
6b4kB02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 40.0 4.28e-01 100.0% 86.5%
3zl8A03 3.90.190.20 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain 0.54 38.0 4.34e-01 99.5% 100.0%
4ponA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 44.0 4.66e-01 97.9% 97.7%
2ozvA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 44.0 4.38e-01 97.4% 84.8%
3i9fB00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 43.0 4.55e-01 97.9% 98.2%
3dlcA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 43.0 4.14e-01 97.4% 77.2%
2efjA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.51 45.0 4.35e-01 97.9% 85.0%
3gpgA00 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.51 39.0 4.25e-01 99.5% 96.3%
2a5yC01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 34.0 3.54e-01 98.5% 72.0%
3cggA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.51 40.0 4.12e-01 97.4% 86.6%
6mroA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.50 43.0 4.36e-01 97.4% 91.8%
3mtiB00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.50 43.0 4.43e-01 97.9% 97.8%
3gwzA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.50 44.0 4.01e-01 97.4% 72.4%
ECOD (72)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4929709 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.93 91.0 7.84e-01 100.0% 86.5%
4926928 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.93 90.0 7.98e-01 100.0% 100.0%
4507224 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.93 90.0 7.65e-01 99.5% 93.0%
5035730 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.92 90.0 7.72e-01 100.0% 97.9%
5042985 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.92 88.0 7.85e-01 98.5% 91.0%
4997728 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.92 88.0 7.69e-01 99.0% 93.7%
4457765 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.92 88.0 7.63e-01 99.0% 93.1%
None 0.92 88.0 7.88e-01 98.5% 92.8%
3838925 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.91 86.0 7.42e-01 97.4% 98.6%
4233076 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.91 88.0 7.46e-01 99.5% 91.0%
4624270 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.91 83.0 7.42e-01 92.8% 97.6%
4298471 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.91 88.0 7.69e-01 100.0% 95.6%
4960127 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.91 88.0 7.42e-01 100.0% 82.0%
4934991 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.90 88.0 7.77e-01 100.0% 91.9%
4622863 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.90 87.0 7.32e-01 100.0% 84.7%
5075270 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.90 87.0 8.18e-01 99.0% 97.3%
3059647 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.90 87.0 7.98e-01 100.0% 96.3%
5037591 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.90 87.0 7.82e-01 100.0% 94.8%
3602562 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.89 86.0 7.52e-01 99.5% 98.5%
4493575 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.89 86.0 7.04e-01 99.5% 95.3%
4947457 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.89 87.0 7.11e-01 100.0% 85.1%
4967058 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.89 86.0 7.59e-01 100.0% 91.3%
3980461 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.89 86.0 7.47e-01 99.0% 90.4%
5049802 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.89 86.0 6.76e-01 100.0% 77.5%
4968397 2.6.1.8 beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › N6_N4_Mtase 0.89 86.0 6.40e-01 100.0% 61.6%
5049716 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.89 85.0 7.47e-01 98.5% 98.5%
4967864 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.89 86.0 8.04e-01 100.0% 97.4%
4081559 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.89 86.0 7.71e-01 99.5% 91.6%
5001667 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.89 86.0 7.18e-01 100.0% 87.7%
4966290 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.89 86.0 7.19e-01 100.0% 87.0%
4086811 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.89 86.0 7.45e-01 100.0% 90.5%
5001000 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.89 86.0 7.55e-01 100.0% 92.8%
5065486 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.89 81.0 7.22e-01 94.8% 95.4%
4946282 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.88 86.0 7.61e-01 100.0% 95.0%
4935750 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.88 86.0 7.33e-01 100.0% 93.3%
4505176 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.88 86.0 7.72e-01 100.0% 94.8%
5001936 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.88 86.0 7.36e-01 100.0% 88.2%
5049276 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.88 85.0 7.58e-01 99.5% 97.6%
3988557 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.88 84.0 7.33e-01 98.5% 99.6%
4936422 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.88 85.0 7.00e-01 100.0% 79.7%
9377 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.88 84.0 7.71e-01 98.5% 97.9%
4944564 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.88 85.0 7.53e-01 100.0% 88.1%
5031729 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.87 85.0 7.30e-01 100.0% 89.6%
5036708 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.87 84.0 7.78e-01 99.5% 96.2%
4625645 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.87 84.0 6.97e-01 99.0% 75.1%
5038841 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.87 85.0 6.70e-01 100.0% 72.3%
5039763 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.87 85.0 7.23e-01 100.0% 86.3%
3165144 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.87 83.0 7.21e-01 98.5% 97.8%
4995700 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.87 84.0 7.39e-01 100.0% 92.8%
5006612 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.87 84.0 7.03e-01 100.0% 78.0%
3512712 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.86 84.0 5.82e-01 100.0% 43.7%
5047210 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.86 84.0 7.43e-01 100.0% 87.7%
4928359 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.86 68.0 7.40e-01 99.0% 94.0%
4948115 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.86 84.0 6.79e-01 100.0% 93.5%
4995766 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.86 82.0 7.52e-01 98.5% 98.8%
5036719 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.86 83.0 6.78e-01 100.0% 93.5%
3941844 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.86 82.0 7.91e-01 99.0% 99.1%
5004246 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.86 82.0 7.42e-01 98.5% 92.7%
4995701 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.85 82.0 7.37e-01 100.0% 98.4%
346155 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.85 83.0 7.60e-01 100.0% 94.1%
4382030 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.85 82.0 7.05e-01 100.0% 90.5%
5068480 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.85 82.0 7.35e-01 100.0% 89.4%
5070667 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.85 83.0 7.43e-01 100.0% 97.2%
4999653 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.84 80.0 7.17e-01 98.5% 98.8%
3839633 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.84 80.0 7.43e-01 97.9% 99.1%
5073283 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.83 81.0 7.16e-01 100.0% 80.8%
5080999 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.83 81.0 6.88e-01 100.0% 91.6%
3277079 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.81 78.0 7.27e-01 100.0% 93.0%
4933865 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.72 53.0 4.16e-01 100.0% 39.7%
4980066 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.53 44.0 4.45e-01 97.4% 87.9%
4405891 2003.1.5.73 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_16 0.51 46.0 4.30e-01 97.9% 84.1%
3252454 2003.1.5.73 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_16 0.50 46.0 4.29e-01 97.9% 81.9%
D2 high residues 210-306_509-535
PDB
D3 medium residues 142-185_536-558
PDB
Domain cluster: representative
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4624270 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.74 68.0 4.49e-01 100.0% 32.4%
D4 medium residues 314-423
PDB
Domain cluster: representative
CATH (20)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2dchX01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.80 59.0 6.38e-01 100.0% 89.2%
3iabB01 3.30.110.20 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain 0.67 47.0 4.97e-01 83.6% 80.8%
3e05B00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.63 42.0 3.50e-01 85.5% 39.6%
6fdfA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.59 38.0 3.20e-01 83.6% 36.4%
3c6kB03 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 39.0 3.31e-01 87.3% 40.6%
3dfeA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 36.0 4.12e-01 81.8% 84.1%
2hekA02 3.30.70.1370 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › HD domain like 0.56 41.0 4.58e-01 79.1% 96.6%
4f0aB02 3.30.2460.20 Alpha Beta › 2-Layer Sandwich › Endo-n-acetylneuraminidase fold › Wnt (Wingless and Int-1), C-terminal domain 0.55 34.0 4.16e-01 73.6% 100.0%
5mmjj00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.55 43.0 4.50e-01 81.8% 99.0%
3ispB02 3.40.190.290 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › 0.55 41.0 3.46e-01 80.0% 64.6%
3hheA02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.55 34.0 3.88e-01 80.9% 87.2%
6vh5C03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.54 36.0 3.95e-01 81.8% 84.3%
2od4B01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 33.0 3.54e-01 77.3% 74.2%
4fx9A03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.53 36.0 3.58e-01 74.5% 67.3%
6s6yD01 3.30.70.520 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 44.0 3.93e-01 91.8% 94.3%
3ue2A01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.52 34.0 3.71e-01 83.6% 84.1%
3eeeA00 3.90.1520.10 Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain 0.52 44.0 3.69e-01 98.2% 54.8%
2gysA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 35.0 3.79e-01 88.2% 83.2%
1sjrA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.51 30.0 3.08e-01 82.7% 57.4%
1j5wB01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.50 44.0 3.63e-01 97.3% 92.0%
ECOD (33)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4978365 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.86 61.0 7.10e-01 100.0% 100.0%
5012700 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.83 59.0 6.65e-01 100.0% 94.1%
3603087 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.80 57.0 6.37e-01 100.0% 94.1%
4993815 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.75 55.0 6.26e-01 98.2% 98.8%
4940944 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.72 60.0 5.74e-01 99.1% 76.8%
4171345 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.70 57.0 6.15e-01 100.0% 98.9%
3740450 328.1.1.3 a+b two layers › IF3-like › AlbA-like › AlbA-like › Rpp20 0.68 46.0 5.09e-01 81.8% 85.6%
4336917 2003.1.5.179 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PF30636 0.66 44.0 3.55e-01 80.9% 37.9%
5047813 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.66 61.0 5.33e-01 100.0% 85.6%
5027492 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.66 59.0 5.41e-01 99.1% 75.0%
4541172 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.66 59.0 5.54e-01 97.3% 80.8%
3929905 328.1.1.1 a+b two layers › IF3-like › AlbA-like › AlbA-like › Alba 0.64 50.0 4.85e-01 86.4% 74.2%
None 0.62 41.0 3.45e-01 83.6% 40.0%
3793768 328.1.1.3 a+b two layers › IF3-like › AlbA-like › AlbA-like › Rpp20 0.62 47.0 4.59e-01 84.5% 72.5%
3949777 304.8.1.61 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › GDH_ACT1 0.62 50.0 4.39e-01 87.3% 60.6%
4235559 304.8.1.61 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › GDH_ACT1 0.62 50.0 4.20e-01 88.2% 51.9%
4943523 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 30.0 2.93e-01 72.7% 40.0%
3698177 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.60 40.0 3.96e-01 84.5% 64.3%
3395407 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.59 34.0 3.83e-01 86.4% 72.9%
3698585 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.59 35.0 4.01e-01 85.5% 80.0%
4078770 304.5.1.12 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › Nit_Regul_Hom 0.59 46.0 4.49e-01 81.8% 83.3%
3788469 328.1.1.3 a+b two layers › IF3-like › AlbA-like › AlbA-like › Rpp20 0.58 46.0 4.14e-01 83.6% 78.0%
4019210 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.58 35.0 4.32e-01 86.4% 95.7%
3575538 304.126.1.1 a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C › V_ATPase_I 0.58 40.0 4.02e-01 82.7% 70.0%
2426535 328.1.1.3 a+b two layers › IF3-like › AlbA-like › AlbA-like › Rpp20 0.57 46.0 4.34e-01 86.4% 71.0%
3720709 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.56 42.0 3.12e-01 84.5% 30.0%
3264940 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.56 43.0 4.19e-01 89.1% 75.0%
4994628 328.9.1.0 a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain 0.55 37.0 4.02e-01 82.7% 83.3%
3473408 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.53 35.0 3.87e-01 76.4% 87.1%
5069953 218.2.1.1 a+b two layers › Enolase-N/ribosomal protein › Ribosomal protein L22 › Ribosomal protein L22 › Ribosomal_L22 0.52 36.0 3.24e-01 70.9% 91.0%
4971609 304.139.1.1 a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › DevR 0.51 38.0 2.71e-01 78.2% 88.1%
5008483 304.139.1.1 a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › DevR 0.51 38.0 2.83e-01 79.1% 90.3%
3808598 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.50 39.0 3.82e-01 83.6% 80.0%
D5 medium residues 424-508
PDB
Domain cluster: representative
CATH (60)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ef0B02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.89 72.0 5.41e-01 89.4% 38.3%
1dfaA03 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.87 73.0 7.06e-01 89.4% 91.6%
7qssA01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.85 72.0 5.43e-01 89.4% 43.1%
3hyiA01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.80 67.0 5.04e-01 89.4% 39.8%
2dchX01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.80 66.0 6.42e-01 88.2% 80.6%
2cw8A03 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.79 65.0 5.09e-01 89.4% 43.8%
2vs7A02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.77 56.0 5.87e-01 77.6% 83.3%
8dy9I01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.77 64.0 4.79e-01 90.6% 39.3%
2dchX02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.73 61.0 5.56e-01 89.4% 73.0%
5a72A00 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.72 57.0 4.59e-01 83.5% 51.6%
1jvaB02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.71 56.0 5.11e-01 83.5% 67.3%
1dq3A04 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.70 62.0 5.61e-01 96.5% 98.2%
3hz7A00 3.30.110.40 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › TusA-like domain 0.70 50.0 5.37e-01 89.4% 86.3%
2hf2B02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.70 52.0 4.77e-01 77.6% 92.5%
3e05B00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.69 50.0 3.73e-01 74.1% 38.5%
1dq3A03 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.69 55.0 5.48e-01 85.9% 85.1%
4lq0A02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.67 56.0 4.63e-01 90.6% 57.8%
2nxcA03 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.66 45.0 3.70e-01 88.2% 39.2%
2b3tA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.66 45.0 3.45e-01 71.8% 31.2%
2ex5A00 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.66 53.0 4.04e-01 89.4% 43.5%
4q20A02 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.65 48.0 4.04e-01 78.8% 69.1%
1dusA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.65 46.0 3.51e-01 84.7% 32.0%
1x19A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.65 47.0 3.82e-01 89.4% 40.6%
3evzA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.65 51.0 4.01e-01 90.6% 42.2%
4z1xA02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.65 54.0 4.53e-01 91.8% 53.8%
2lrrA00 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.65 48.0 5.20e-01 84.7% 94.3%
5idmA00 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.65 48.0 3.85e-01 80.0% 92.7%
3e54A00 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.65 53.0 4.26e-01 88.2% 50.3%
4gt8A00 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.64 47.0 4.12e-01 78.8% 69.2%
4dcmA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.64 46.0 3.63e-01 90.6% 36.8%
3i24B00 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.64 46.0 3.97e-01 76.5% 69.8%
4yhxA01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.64 51.0 4.29e-01 85.9% 56.7%
3grzB00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.64 45.0 3.46e-01 90.6% 32.6%
2cpmA00 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.63 52.0 5.10e-01 98.8% 80.9%
4kp4A02 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.63 47.0 3.98e-01 81.2% 98.6%
3douA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.63 43.0 3.36e-01 71.8% 33.7%
7n0eB02 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.63 45.0 4.00e-01 75.3% 68.9%
2gukA00 3.30.2190.10 Alpha Beta › 2-Layer Sandwich › PG1857-like › PG1857-like 0.62 47.0 4.32e-01 80.0% 62.2%
3jz3B01 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.62 50.0 4.21e-01 88.2% 92.6%
3zxoA00 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.62 46.0 4.13e-01 80.0% 72.0%
4gczB03 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.62 48.0 3.95e-01 84.7% 93.8%
2plwA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.62 44.0 3.44e-01 74.1% 56.6%
5vnxA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.61 42.0 3.68e-01 72.9% 45.2%
7r3eB02 3.30.450.80 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain 0.61 42.0 3.47e-01 71.8% 73.6%
5mmjh01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.60 41.0 4.30e-01 71.8% 80.0%
2fphX01 3.30.1370.160 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.60 49.0 5.12e-01 91.8% 96.1%
4r3aA02 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.59 44.0 3.78e-01 80.0% 71.1%
1iugA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.59 41.0 3.78e-01 72.9% 56.8%
4iw7A01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.58 43.0 3.95e-01 78.8% 75.7%
3dmgA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.56 41.0 3.30e-01 90.6% 37.9%
1js3A03 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.56 41.0 3.95e-01 76.5% 69.1%
5flmA02 3.30.1360.140 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.56 47.0 4.02e-01 91.8% 77.9%
1fc4A02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.55 41.0 3.56e-01 80.0% 64.7%
3hnrA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 45.0 3.45e-01 90.6% 48.7%
1ohvA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.54 42.0 3.40e-01 84.7% 81.3%
2fl4A02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.53 41.0 3.84e-01 89.4% 67.3%
6lpnA04 3.30.70.2740 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 39.0 3.80e-01 77.6% 72.6%
3blnA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.52 39.0 3.39e-01 89.4% 48.6%
1u6mA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.51 44.0 3.49e-01 97.6% 73.5%
1i72A00 3.60.90.10 Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase 0.51 40.0 2.88e-01 84.7% 46.6%
ECOD (90)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5065935 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.91 75.0 7.95e-01 87.1% 97.3%
4075546 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.90 78.0 7.71e-01 91.8% 97.8%
4993382 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.88 75.0 7.16e-01 89.4% 98.9%
4464568 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.87 74.0 6.91e-01 89.4% 82.0%
4978366 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.86 67.0 7.30e-01 87.1% 98.6%
3952678 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.86 71.0 7.00e-01 88.2% 100.0%
4113237 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.86 72.0 6.97e-01 89.4% 85.3%
3950275 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.85 61.0 6.15e-01 74.1% 84.7%
5028300 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.85 60.0 6.10e-01 78.8% 74.1%
4938255 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.84 62.0 6.39e-01 80.0% 81.2%
5046395 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.84 69.0 7.29e-01 87.1% 98.7%
4821456 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.84 63.0 7.01e-01 95.3% 100.0%
5022297 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.84 71.0 6.81e-01 90.6% 80.0%
4127810 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.83 74.0 6.51e-01 94.1% 96.7%
4943246 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.83 71.0 6.72e-01 90.6% 78.0%
3602223 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.83 69.0 6.61e-01 87.1% 77.9%
4629783 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.83 73.0 6.41e-01 94.1% 94.2%
5023543 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.82 69.0 6.50e-01 91.8% 76.0%
5066572 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.82 73.0 6.80e-01 96.5% 97.1%
4997777 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.82 61.0 6.18e-01 78.8% 81.2%
4971295 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.81 63.0 6.06e-01 82.4% 81.1%
5052155 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.79 71.0 5.54e-01 97.6% 76.0%
4993483 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.79 67.0 6.20e-01 90.6% 77.1%
4978265 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.79 73.0 5.82e-01 100.0% 76.9%
3604140 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.79 71.0 5.42e-01 97.6% 77.8%
3950413 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.79 66.0 6.05e-01 90.6% 75.5%
4559752 242.1.1.6 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_WhiA 0.79 64.0 6.29e-01 85.9% 83.3%
4993809 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.79 60.0 5.70e-01 81.2% 71.0%
4933638 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.78 65.0 5.46e-01 89.4% 82.9%
5009161 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.78 71.0 4.77e-01 98.8% 34.0%
5052153 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.78 59.0 5.30e-01 80.0% 62.6%
4096150 242.1.1.6 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_WhiA 0.78 66.0 5.72e-01 90.6% 64.8%
4084747 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.78 69.0 4.57e-01 96.5% 35.3%
4212314 242.1.1.5 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N 0.77 64.0 6.08e-01 89.4% 81.0%
4997606 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.77 70.0 5.61e-01 97.6% 74.2%
4968895 5103.1.1.2 a/b three-layered sandwiches › Insert domain in hypothetical protein PF0380 › Insert domain in hypothetical protein PF0380 › Insert domain in hypothetical protein PF0380 › DUF1015 0.77 53.0 4.20e-01 70.6% 54.1%
4626502 242.1.1.6 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_WhiA 0.77 65.0 5.65e-01 90.6% 64.8%
4288172 242.1.1.6 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_WhiA 0.77 65.0 5.55e-01 90.6% 61.5%
4200948 242.1.1.2 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_2 0.76 58.0 5.49e-01 80.0% 72.0%
5046394 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.76 57.0 5.61e-01 78.8% 80.0%
5027605 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.74 56.0 5.63e-01 80.0% 84.7%
4934140 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.74 62.0 5.55e-01 89.4% 68.7%
4989805 328.5.1.0 a+b two layers › IF3-like › SirA-like › SirA-like 0.73 51.0 5.60e-01 90.6% 87.1%
4997781 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.73 61.0 5.68e-01 90.6% 76.2%
4937054 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.73 60.0 5.65e-01 90.6% 80.0%
4122798 242.1.1.6 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_WhiA 0.73 58.0 5.38e-01 88.2% 68.6%
4999898 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.72 55.0 5.43e-01 81.2% 81.1%
3403645 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.72 49.0 5.76e-01 90.6% 100.0%
3177415 242.1.1.1 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.72 56.0 5.14e-01 83.5% 66.4%
4230863 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.71 60.0 5.52e-01 91.8% 71.8%
5010185 328.5.1.0 a+b two layers › IF3-like › SirA-like › SirA-like 0.71 45.0 4.89e-01 71.8% 77.1%
5058449 242.1.1.1 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.71 59.0 5.35e-01 91.8% 78.3%
135569 328.5.1.1 a+b two layers › IF3-like › SirA-like › SirA-like › TusA 0.70 50.0 5.35e-01 89.4% 85.1%
4981701 328.5.1.1 a+b two layers › IF3-like › SirA-like › SirA-like › TusA 0.69 47.0 5.33e-01 87.1% 90.8%
4994004 328.5.1.1 a+b two layers › IF3-like › SirA-like › SirA-like › TusA 0.69 47.0 4.97e-01 70.6% 78.7%
5028488 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.68 56.0 5.28e-01 90.6% 78.1%
4987072 328.5.1.1 a+b two layers › IF3-like › SirA-like › SirA-like › TusA 0.68 48.0 5.04e-01 90.6% 79.7%
4580031 2003.1.5.55 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PrmA 0.68 46.0 3.40e-01 75.3% 28.2%
3581967 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.68 49.0 5.56e-01 90.6% 98.5%
4979624 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.68 51.0 4.72e-01 81.2% 70.0%
3970617 328.5.1.1 a+b two layers › IF3-like › SirA-like › SirA-like › TusA 0.67 48.0 5.12e-01 90.6% 84.0%
4988529 328.5.1.1 a+b two layers › IF3-like › SirA-like › SirA-like › TusA 0.67 48.0 4.90e-01 90.6% 75.0%
3218484 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.66 48.0 5.23e-01 90.6% 91.4%
3471769 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.66 48.0 3.97e-01 91.8% 44.1%
None 0.65 46.0 3.44e-01 89.4% 31.0%
3926462 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.65 52.0 4.79e-01 89.4% 68.6%
3974161 304.13.1.1 a+b two layers › Alpha-beta plaits › Hypothetical protein VC0424 › Hypothetical protein VC0424 › RraB 0.64 46.0 4.12e-01 74.1% 93.8%
4361828 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.64 51.0 4.72e-01 89.4% 68.6%
3396645 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.64 50.0 4.77e-01 98.8% 71.0%
3595328 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.63 51.0 4.70e-01 89.4% 68.6%
3597859 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.63 54.0 4.74e-01 90.6% 67.5%
4347584 2003.1.5.68 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS_N 0.63 44.0 3.68e-01 89.4% 42.8%
4342029 2003.1.5.145 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › RLMG_N 0.63 45.0 3.44e-01 90.6% 32.8%
3216998 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.63 53.0 4.80e-01 89.4% 72.7%
4489920 2003.1.5.89 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Anamorsin_N 0.63 45.0 3.74e-01 90.6% 43.4%
4012898 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.63 51.0 4.79e-01 91.8% 73.0%
3737985 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.63 50.0 4.76e-01 89.4% 72.0%
3262749 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.62 52.0 4.82e-01 89.4% 78.1%
3272746 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.62 44.0 3.99e-01 90.6% 53.3%
3623603 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.62 52.0 4.80e-01 89.4% 72.4%
5013819 3012.1.1.0 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.62 45.0 5.00e-01 77.6% 100.0%
3728094 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.62 51.0 4.80e-01 91.8% 74.0%
3190610 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.61 52.0 4.74e-01 90.6% 80.9%
3175858 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.61 50.0 4.50e-01 90.6% 64.3%
3457072 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.61 52.0 4.35e-01 90.6% 69.3%
4941828 2003.1.5.46 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS 0.61 43.0 3.32e-01 90.6% 32.2%
3343069 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.60 52.0 4.64e-01 91.8% 70.4%
3481394 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.60 50.0 4.45e-01 89.4% 76.7%
3416416 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.60 50.0 4.66e-01 89.4% 76.2%
3410614 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.56 49.0 4.58e-01 97.6% 90.5%