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LacPavin_0818_WC40_scaffold_193576_prodigal-single.1__X__X__00255
Bact-VirLacPavin_0818_WC40_scaffold_193576_prodigal-single.1__X__X__00255
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-45
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2dn0A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.79 | 66.0 | 5.32e-01 | 100.0% | 56.6% |
| 4fcyA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.72 | 57.0 | 4.72e-01 | 100.0% | 57.7% |
| 5nx5B00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.62 | 51.0 | 3.06e-01 | 100.0% | 32.2% |
| 2p6vA00 | 1.20.120.1110 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › TAFH/NHR1 domain | 0.60 | 44.0 | 3.48e-01 | 91.9% | 84.5% |
| 4h63H01 | 1.20.58.1710 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 39.0 | 3.30e-01 | 81.1% | 100.0% |
| 3f7cA00 | 1.20.1590.10 | Mainly Alpha › Up-down Bundle › YP_001051499.1 fold like › YP_001051499.1 domain like | 0.52 | 40.0 | 2.63e-01 | 97.3% | 35.2% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4393383 | 101.1.1.62 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_24 | 0.83 | 70.0 | 6.89e-01 | 100.0% | 97.5% |
| 3871766 | 101.1.1.24 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N | 0.80 | 66.0 | 5.67e-01 | 100.0% | 58.5% |
| 3971665 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.80 | 65.0 | 5.36e-01 | 100.0% | 52.0% |
| 3932988 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.79 | 63.0 | 5.77e-01 | 100.0% | 69.1% |
| 4023331 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.74 | 59.0 | 5.40e-01 | 100.0% | 69.1% |
| 5023072 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 62.0 | 6.10e-01 | 100.0% | 90.0% |
D2
high
residues 61-235
Domain cluster:
rep: IMGVR_UViG_3300028840_006907-3300028840-Ga0309773_1000015396__D229-404
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7qssA01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.84 | 72.0 | 7.04e-01 | 89.7% | 92.6% |
| 8dy9I01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.73 | 67.0 | 6.37e-01 | 97.7% | 92.7% |
| 5a72A00 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.73 | 42.0 | 4.48e-01 | 96.0% | 64.3% |
| 3hyiA01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.69 | 62.0 | 6.03e-01 | 98.3% | 87.4% |
| 3mahA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.57 | 25.0 | 3.70e-01 | 86.3% | 97.1% |
| 1dd5A02 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.57 | 25.0 | 3.56e-01 | 81.1% | 90.7% |
| 1b4bA00 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.56 | 26.0 | 3.68e-01 | 90.9% | 100.0% |
| 2zkzC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 25.0 | 3.39e-01 | 94.3% | 81.6% |
| 4lowA00 | 3.30.1360.20 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase | 0.55 | 25.0 | 3.42e-01 | 82.3% | 85.7% |
| 2ctfA00 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.54 | 20.0 | 2.60e-01 | 88.6% | 53.9% |
| 4iw7A01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.54 | 27.0 | 3.22e-01 | 96.0% | 67.8% |
| 3onqA02 | 3.30.70.2730 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 21.0 | 2.95e-01 | 76.0% | 72.8% |
| 5mmjh01 | 3.30.1370.30 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.53 | 25.0 | 3.57e-01 | 81.7% | 100.0% |
| 1js3A03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.53 | 25.0 | 3.24e-01 | 89.1% | 77.3% |
| 1ub9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 28.0 | 3.55e-01 | 91.4% | 87.0% |
| 1tigA00 | 3.30.110.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Translation initiation factor 3 (IF-3), C-terminal domain | 0.53 | 27.0 | 3.62e-01 | 80.6% | 94.3% |
| 4aimA03 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.51 | 18.0 | 2.78e-01 | 91.4% | 76.1% |
| 1nrkA01 | 3.30.70.1630 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 26.0 | 3.39e-01 | 88.0% | 88.7% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4979525 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.84 | 80.0 | 7.72e-01 | 100.0% | 95.4% |
| 4996524 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.83 | 79.0 | 7.60e-01 | 100.0% | 93.3% |
| 3603717 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.77 | 36.0 | 5.33e-01 | 94.9% | 98.8% |
| 4575751 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.73 | 38.0 | 5.35e-01 | 98.9% | 100.0% |
| 5556 | 242.1.1.4 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › Endonuc_subdom | 0.67 | 37.0 | 4.92e-01 | 98.9% | 98.0% |
| 3948181 | 304.54.1.0 ↗ | a+b two layers › Alpha-beta plaits › CcmK-like › CcmK-like | 0.66 | 28.0 | 4.31e-01 | 85.1% | 94.6% |
| 4937620 | 3012.1.1.0 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain | 0.58 | 23.0 | 3.49e-01 | 80.6% | 88.6% |
| 4938715 | 306.2.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › arginine repressor C terminal domain-related › C-terminal domain of arginine repressor | 0.57 | 28.0 | 3.83e-01 | 91.4% | 92.9% |
| 5077049 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.56 | 21.0 | 3.10e-01 | 95.4% | 76.0% |
| 4974273 | 3501.1.1.0 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 | 0.52 | 23.0 | 3.38e-01 | 86.3% | 98.6% |
D3
medium
residues 244-285
Domain cluster:
representative
CATH (53)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2x48A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.81 | 66.0 | 6.08e-01 | 90.5% | 70.4% |
| 1k78A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 69.0 | 6.01e-01 | 100.0% | 65.2% |
| 1jhgA00 | 1.10.1270.10 | Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like | 0.80 | 67.0 | 5.18e-01 | 100.0% | 42.6% |
| 1z05A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 65.0 | 5.63e-01 | 100.0% | 62.5% |
| 3zh9B03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.76 | 67.0 | 4.73e-01 | 100.0% | 33.3% |
| 6jqsA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 67.0 | 5.74e-01 | 100.0% | 76.1% |
| 2lvsA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.76 | 63.0 | 5.86e-01 | 100.0% | 75.0% |
| 1hw1A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 63.0 | 5.32e-01 | 97.6% | 70.7% |
| 1r71A01 | 1.10.10.730 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain | 0.76 | 66.0 | 5.92e-01 | 97.6% | 71.4% |
| 1l3lA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 67.0 | 5.81e-01 | 100.0% | 81.0% |
| 6v7xB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 62.0 | 5.69e-01 | 95.2% | 87.5% |
| 4nb5B01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 61.0 | 5.04e-01 | 100.0% | 58.8% |
| 6cc0A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 65.0 | 5.53e-01 | 100.0% | 72.9% |
| 5f64A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 66.0 | 5.42e-01 | 100.0% | 68.0% |
| 1a04A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 63.0 | 5.19e-01 | 100.0% | 56.2% |
| 2o0yB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 62.0 | 5.48e-01 | 100.0% | 70.8% |
| 1ku9B01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 61.0 | 4.96e-01 | 100.0% | 51.7% |
| 4rocA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.73 | 60.0 | 4.68e-01 | 100.0% | 49.5% |
| 3g3zA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 58.0 | 5.25e-01 | 97.6% | 67.2% |
| 2fq3A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 59.0 | 4.90e-01 | 100.0% | 60.0% |
| 4i2oA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 59.0 | 4.89e-01 | 95.2% | 66.3% |
| 3k9tA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 57.0 | 5.18e-01 | 100.0% | 65.2% |
| 3ulqB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 63.0 | 5.66e-01 | 100.0% | 87.9% |
| 2qlzA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 57.0 | 5.06e-01 | 90.5% | 68.3% |
| 5fgmA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 61.0 | 5.34e-01 | 97.6% | 67.7% |
| 3p7nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 62.0 | 5.20e-01 | 100.0% | 70.8% |
| 3tqnA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 61.0 | 5.14e-01 | 100.0% | 69.9% |
| 1q1hA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 57.0 | 4.73e-01 | 97.6% | 51.8% |
| 3eetA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 58.0 | 5.21e-01 | 100.0% | 81.5% |
| 7pzaA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 57.0 | 4.69e-01 | 97.6% | 69.8% |
| 6sdkA01 | 1.10.10.2830 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.70 | 56.0 | 4.34e-01 | 92.9% | 42.3% |
| 4nqwA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 61.0 | 5.31e-01 | 100.0% | 70.3% |
| 4nvsA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.69 | 56.0 | 3.79e-01 | 90.5% | 53.5% |
| 4izzB02 | 1.10.10.1680 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › HetR, N-terminal DNA-binding domain | 0.69 | 56.0 | 4.98e-01 | 100.0% | 66.2% |
| 2zopA00 | 1.10.520.30 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › AF1862-like domain | 0.69 | 56.0 | 4.27e-01 | 97.6% | 93.8% |
| 4jp0A03 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.67 | 48.0 | 5.04e-01 | 92.9% | 100.0% |
| 2gloA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.67 | 52.0 | 4.82e-01 | 92.9% | 72.9% |
| 3onqA03 | 1.10.10.2840 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain | 0.67 | 55.0 | 3.98e-01 | 97.6% | 34.4% |
| 1pbwB00 | 1.10.555.10 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase; Chain A › Rho GTPase activation protein | 0.65 | 50.0 | 3.44e-01 | 100.0% | 31.8% |
| 2elhA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 51.0 | 4.63e-01 | 100.0% | 62.1% |
| 2pmiB00 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.65 | 53.0 | 3.49e-01 | 100.0% | 46.9% |
| 7ml0M01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.64 | 49.0 | 4.21e-01 | 97.6% | 52.4% |
| 3szpA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 51.0 | 4.12e-01 | 97.6% | 51.7% |
| 2o38A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.62 | 47.0 | 4.17e-01 | 88.1% | 60.0% |
| 2mqkA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.61 | 47.0 | 4.20e-01 | 90.5% | 58.5% |
| 1l0oC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 49.0 | 4.58e-01 | 97.6% | 82.5% |
| 3rmqA02 | 6.10.140.1650 | Special › Helix non-globular › Helix Hairpins › | 0.61 | 49.0 | 4.53e-01 | 92.9% | 75.0% |
| 1x4tA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.59 | 43.0 | 3.92e-01 | 78.6% | 62.1% |
| 8dtqA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.59 | 43.0 | 3.61e-01 | 83.3% | 46.3% |
| 4irlB02 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.57 | 42.0 | 3.29e-01 | 88.1% | 36.6% |
| 5aj3N01 | 1.10.287.1480 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.56 | 43.0 | 3.40e-01 | 83.3% | 47.3% |
| 2kpjA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.54 | 41.0 | 3.60e-01 | 90.5% | 55.7% |
| 1fadA00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.50 | 36.0 | 2.89e-01 | 81.0% | 92.6% |
ECOD (89)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3210747 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.82 | 68.0 | 6.72e-01 | 92.9% | 86.7% |
| 5061884 | 101.1.2.887 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF1670 | 0.81 | 70.0 | 4.71e-01 | 100.0% | 26.9% |
| 4002905 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.81 | 70.0 | 6.14e-01 | 100.0% | 66.2% |
| 3544647 | 101.1.1.24 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N | 0.81 | 68.0 | 5.89e-01 | 100.0% | 61.5% |
| 4214308 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.81 | 70.0 | 5.60e-01 | 100.0% | 50.6% |
| 5044589 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.80 | 69.0 | 6.04e-01 | 100.0% | 66.2% |
| 3283589 | 101.1.1.368 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_58 | 0.80 | 70.0 | 6.60e-01 | 97.6% | 86.0% |
| 4054648 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.80 | 70.0 | 6.46e-01 | 100.0% | 76.4% |
| 4996857 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.80 | 68.0 | 6.21e-01 | 100.0% | 71.2% |
| 4977807 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.80 | 68.0 | 5.97e-01 | 100.0% | 66.2% |
| 4979402 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.80 | 70.0 | 6.22e-01 | 100.0% | 71.7% |
| 3603167 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.80 | 70.0 | 6.06e-01 | 100.0% | 64.6% |
| 4980944 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.80 | 66.0 | 5.43e-01 | 97.6% | 55.0% |
| 3949663 | 101.1.1.307 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF3071 | 0.80 | 65.0 | 6.64e-01 | 90.5% | 95.0% |
| 5016985 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.79 | 66.0 | 6.52e-01 | 95.2% | 88.9% |
| 4968115 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.79 | 65.0 | 5.60e-01 | 97.6% | 62.9% |
| 2628410 | 101.1.1.86 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Raf1_HTH | 0.79 | 63.0 | 5.41e-01 | 90.5% | 56.1% |
| 4995789 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.79 | 63.0 | 6.37e-01 | 92.9% | 97.5% |
| 3932988 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.78 | 66.0 | 6.17e-01 | 100.0% | 78.2% |
| 5047503 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.78 | 66.0 | 6.31e-01 | 100.0% | 84.0% |
| 4987653 | 101.1.2.139 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_23 | 0.78 | 67.0 | 6.59e-01 | 100.0% | 91.1% |
| 5028266 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.78 | 65.0 | 5.88e-01 | 100.0% | 67.8% |
| 3962903 | 101.1.2.486 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_58 | 0.78 | 65.0 | 6.63e-01 | 92.9% | 97.5% |
| 3922450 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.78 | 64.0 | 6.56e-01 | 100.0% | 100.0% |
| 5020331 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.77 | 68.0 | 5.89e-01 | 100.0% | 66.2% |
| 5047836 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.77 | 65.0 | 5.50e-01 | 100.0% | 57.3% |
| 4385054 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.77 | 60.0 | 6.14e-01 | 88.1% | 92.5% |
| 5060563 | 101.1.1.544 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF1670 | 0.77 | 64.0 | 5.44e-01 | 100.0% | 57.1% |
| 4990647 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.77 | 64.0 | 5.93e-01 | 95.2% | 76.4% |
| 4939690 | 101.1.1.40 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Recombinase | 0.77 | 65.0 | 4.98e-01 | 97.6% | 84.0% |
| 4976095 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.77 | 63.0 | 5.76e-01 | 90.5% | 81.8% |
| 5030780 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.76 | 64.0 | 6.17e-01 | 100.0% | 86.0% |
| 3944370 | 101.1.1.318 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › PF30335 | 0.76 | 66.0 | 5.64e-01 | 100.0% | 61.4% |
| 4992594 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.76 | 65.0 | 6.37e-01 | 97.6% | 95.6% |
| 4994121 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.76 | 61.0 | 6.26e-01 | 95.2% | 100.0% |
| 4031756 | 101.1.2.645 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_40 | 0.76 | 67.0 | 5.30e-01 | 100.0% | 50.6% |
| 5060354 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 61.0 | 5.44e-01 | 97.6% | 67.7% |
| 5028009 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 60.0 | 6.18e-01 | 100.0% | 97.5% |
| 5063318 | 101.1.6.12 ↗ | alpha arrays › HTH › HTH › TrpR › HTH_23 | 0.75 | 63.0 | 5.82e-01 | 97.6% | 74.5% |
| 2759 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.75 | 67.0 | 5.75e-01 | 100.0% | 78.5% |
| 3391053 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.75 | 63.0 | 6.20e-01 | 100.0% | 93.3% |
| 4578719 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.75 | 67.0 | 5.82e-01 | 100.0% | 79.4% |
| 4010691 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.75 | 67.0 | 6.10e-01 | 100.0% | 81.8% |
| 3589502 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.75 | 61.0 | 5.85e-01 | 95.2% | 90.0% |
| 4952035 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.75 | 63.0 | 5.70e-01 | 100.0% | 70.0% |
| 3968151 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.75 | 66.0 | 5.22e-01 | 100.0% | 60.0% |
| 4007717 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.75 | 67.0 | 5.36e-01 | 100.0% | 63.7% |
| 4952293 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.75 | 60.0 | 6.09e-01 | 95.2% | 100.0% |
| 3287536 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.74 | 64.0 | 6.34e-01 | 97.6% | 91.1% |
| 4961899 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.74 | 62.0 | 5.47e-01 | 100.0% | 63.1% |
| 5007549 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 61.0 | 4.84e-01 | 97.6% | 44.2% |
| 4260337 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.74 | 66.0 | 5.01e-01 | 100.0% | 53.7% |
| 3411416 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.74 | 60.0 | 5.96e-01 | 100.0% | 90.9% |
| 3286659 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.74 | 66.0 | 5.53e-01 | 100.0% | 81.4% |
| 3947091 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.74 | 65.0 | 5.78e-01 | 100.0% | 85.0% |
| 3944331 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.74 | 65.0 | 5.28e-01 | 100.0% | 63.7% |
| 5017723 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.74 | 61.0 | 5.19e-01 | 100.0% | 58.7% |
| 3968864 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.74 | 64.0 | 5.34e-01 | 100.0% | 60.0% |
| 3602714 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.74 | 62.0 | 6.39e-01 | 95.2% | 100.0% |
| 1177545 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.74 | 65.0 | 5.52e-01 | 100.0% | 75.0% |
| 4944329 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 61.0 | 5.87e-01 | 100.0% | 88.0% |
| 3066183 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.73 | 59.0 | 4.45e-01 | 97.6% | 37.1% |
| 5074940 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.73 | 61.0 | 5.72e-01 | 100.0% | 78.2% |
| 4008046 | 101.1.1.348 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › PF30461 | 0.73 | 62.0 | 5.93e-01 | 100.0% | 84.0% |
| 4960928 | 101.1.3.16 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Sigma70_r4 | 0.73 | 66.0 | 5.78e-01 | 100.0% | 73.3% |
| 3981529 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.73 | 64.0 | 5.87e-01 | 100.0% | 90.9% |
| 4987929 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.72 | 65.0 | 5.74e-01 | 100.0% | 73.3% |
| 4963466 | 101.1.1.368 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_58 | 0.72 | 61.0 | 6.05e-01 | 97.6% | 93.3% |
| 3090474 | 4020.1.1.0 ↗ | a+b two layers › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes | 0.72 | 65.0 | 4.45e-01 | 100.0% | 35.5% |
| 4008322 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.72 | 59.0 | 5.54e-01 | 100.0% | 74.5% |
| 3794969 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.72 | 62.0 | 5.87e-01 | 100.0% | 86.0% |
| 5077607 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.71 | 56.0 | 5.18e-01 | 97.6% | 73.3% |
| 4943227 | 101.1.1.63 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 | 0.71 | 57.0 | 5.67e-01 | 100.0% | 95.6% |
| 3590732 | 101.1.1.364 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_49 | 0.71 | 56.0 | 5.58e-01 | 100.0% | 88.9% |
| 3590303 | 101.1.1.13 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 | 0.71 | 58.0 | 4.97e-01 | 100.0% | 65.3% |
| 5024511 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.70 | 57.0 | 5.52e-01 | 100.0% | 82.0% |
| 3509592 | 101.1.1.24 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N | 0.70 | 56.0 | 5.12e-01 | 100.0% | 66.7% |
| 4957415 | 101.1.1.13 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 | 0.70 | 58.0 | 5.27e-01 | 100.0% | 70.0% |
| 3904156 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.69 | 55.0 | 5.45e-01 | 100.0% | 91.1% |
| 3988724 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.68 | 56.0 | 5.16e-01 | 100.0% | 71.7% |
| 4965799 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.68 | 54.0 | 4.90e-01 | 100.0% | 66.2% |
| 3693312 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.68 | 52.0 | 4.75e-01 | 90.5% | 66.7% |
| 4994602 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.67 | 51.0 | 4.65e-01 | 90.5% | 61.7% |
| 4964802 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.67 | 55.0 | 5.01e-01 | 100.0% | 68.3% |
| 3955106 | 101.1.3.4 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 | 0.66 | 55.0 | 4.38e-01 | 97.6% | 48.9% |
| 4270690 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.65 | 52.0 | 4.76e-01 | 97.6% | 83.3% |
| 3968886 | 101.1.1.77 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_50 | 0.64 | 52.0 | 4.67e-01 | 100.0% | 69.2% |
| 3783362 | 2004.1.1.455 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 | 0.63 | 49.0 | 2.77e-01 | 100.0% | 6.8% |
| 5055780 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.62 | 45.0 | 4.62e-01 | 90.5% | 90.0% |