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LacPavin_0818_WC40_scaffold_193576_prodigal-single.1__X__X__00294

Bact-Vir

LacPavin_0818_WC40_scaffold_193576_prodigal-single.1__X__X__00294

Identity

Kingdom:
phage

Quality

74.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 13-79
PDB
Domain cluster: representative
CATH (36)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1tc3C00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.81 53.0 5.91e-01 73.1% 88.2%
1k78A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 54.0 5.52e-01 70.1% 72.7%
1on2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 49.0 4.80e-01 70.1% 81.9%
5y9sC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 49.0 4.57e-01 70.1% 65.9%
3szpA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 48.0 4.42e-01 70.1% 61.8%
3hhgE01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 49.0 4.46e-01 71.6% 63.6%
5y2vC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 48.0 4.44e-01 70.1% 63.5%
2esnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 48.0 4.35e-01 70.1% 61.8%
2h09A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 49.0 4.85e-01 73.1% 85.9%
3fxqB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 49.0 4.46e-01 74.6% 58.9%
5z4zC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 47.0 4.29e-01 71.6% 64.8%
1r1uB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 48.0 4.33e-01 74.6% 60.2%
5fo5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 47.0 4.29e-01 71.6% 62.5%
2gxgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 49.0 3.87e-01 76.1% 52.1%
1j5yA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 48.0 4.98e-01 76.1% 92.2%
3zh9B03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.67 50.0 3.98e-01 77.6% 66.7%
3g3zA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 46.0 4.77e-01 71.6% 96.9%
2rdpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 48.0 3.73e-01 74.6% 45.0%
2r0qC02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.67 49.0 5.34e-01 77.6% 96.4%
5eriA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 48.0 3.71e-01 77.6% 49.7%
2hr3D02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 46.0 4.81e-01 74.6% 93.5%
3tgnB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 47.0 4.84e-01 77.6% 88.9%
2p8tA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 45.0 4.40e-01 79.1% 68.0%
6kf9G01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 45.0 4.27e-01 76.1% 75.6%
2y75A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 44.0 3.62e-01 74.6% 46.4%
3k69A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 45.0 3.53e-01 77.6% 41.3%
7dvrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 44.0 3.50e-01 74.6% 42.6%
2r3sB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 43.0 4.06e-01 73.1% 67.9%
2fa5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 44.0 3.53e-01 80.6% 53.2%
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.58 42.0 3.72e-01 77.6% 57.3%
3py8A04 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.58 44.0 3.46e-01 82.1% 69.4%
3mklA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.56 41.0 3.58e-01 77.6% 76.9%
3keoA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 41.0 4.08e-01 77.6% 81.9%
1l0oC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 37.0 3.95e-01 70.1% 84.2%
3nnrA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.54 40.0 2.99e-01 85.1% 53.5%
1wueB01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.54 41.0 3.24e-01 85.1% 65.1%
ECOD (32)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5011648 101.1.1.368 alpha arrays › HTH › HTH › Three-helical HTH › HTH_58 0.86 58.0 6.66e-01 70.1% 98.0%
5016985 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.85 55.0 6.61e-01 74.6% 100.0%
3794969 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.84 54.0 6.18e-01 70.1% 88.0%
4008322 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.84 56.0 6.14e-01 71.6% 83.6%
3741290 101.1.1.201 alpha arrays › HTH › HTH › Three-helical HTH › Bot1p 0.83 58.0 5.13e-01 71.6% 53.3%
4002905 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 56.0 5.73e-01 77.6% 72.3%
4967740 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 56.0 6.14e-01 71.6% 85.5%
3787936 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.82 55.0 5.82e-01 71.6% 76.7%
5014141 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.81 53.0 6.06e-01 71.6% 90.0%
3988724 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 57.0 6.03e-01 73.1% 83.3%
3546741 101.1.1.96 alpha arrays › HTH › HTH › Three-helical HTH › Neugrin 0.81 59.0 5.06e-01 77.6% 51.0%
5015850 205.1.1.1 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4 0.81 52.0 3.89e-01 71.6% 29.7%
5019249 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 56.0 5.13e-01 73.1% 76.5%
5074939 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.78 56.0 6.18e-01 76.1% 100.0%
4412897 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 51.0 5.99e-01 71.6% 100.0%
3603167 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.77 54.0 5.53e-01 82.1% 75.4%
5063318 101.1.6.12 alpha arrays › HTH › HTH › TrpR › HTH_23 0.77 54.0 6.01e-01 73.1% 96.4%
4952294 101.1.2.870 alpha arrays › HTH › HTH › winged helix domain › GerE 0.76 53.0 5.84e-01 79.1% 89.1%
5005249 101.1.1.259 alpha arrays › HTH › HTH › Three-helical HTH › Terminase_5 0.75 55.0 4.49e-01 77.6% 76.7%
3619451 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.73 56.0 5.72e-01 82.1% 95.4%
4245572 101.1.8.16 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › HTH_40 0.73 49.0 4.91e-01 70.1% 72.9%
3166394 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.72 50.0 4.33e-01 71.6% 58.0%
3945655 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.72 50.0 4.51e-01 71.6% 62.2%
3981547 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.71 50.0 4.42e-01 73.1% 60.0%
3986748 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.70 49.0 4.48e-01 73.1% 63.3%
4380236 4216.1.1.2 a+b duplicates or obligate multimers › Heme iron utilization protein-like › Heme iron utilization protein-like › Heme iron utilization protein-like › ChuX_HutX 0.70 49.0 3.61e-01 73.1% 69.5%
3991300 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.69 51.0 4.81e-01 79.1% 76.2%
3967891 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.68 47.0 4.35e-01 71.6% 64.7%
5010521 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.68 47.0 4.13e-01 73.1% 53.0%
4980377 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.67 48.0 3.34e-01 74.6% 28.1%
3168867 101.1.1.161 alpha arrays › HTH › HTH › Three-helical HTH › NPR2 0.66 47.0 4.59e-01 77.6% 68.0%
5058647 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 51.0 4.64e-01 83.6% 82.2%
D2 high residues 106-220
PDB
Domain cluster: representative
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF04480.19 best DUF559 61.2 1.10e-16 91.3% 79.8%
PF18741.8 MTES_1575 39.1 8.90e-10 79.1% 81.2%
CATH (53)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3r3pB00 3.40.960.10 Alpha Beta › 3-Layer(aba) Sandwich › Endonuclease; Chain A › VSR Endonuclease 0.85 67.0 7.27e-01 87.0% 96.9%
1vsrA00 3.40.960.10 Alpha Beta › 3-Layer(aba) Sandwich › Endonuclease; Chain A › VSR Endonuclease 0.84 75.0 7.03e-01 93.0% 93.3%
3bm3A00 3.40.91.80 Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › 0.71 59.0 4.51e-01 89.6% 92.7%
3c8mA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.70 57.0 4.98e-01 86.1% 95.2%
5awhA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.69 59.0 5.06e-01 92.2% 78.2%
2vycA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.67 57.0 5.37e-01 92.2% 91.4%
3c5hA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 57.0 4.50e-01 92.2% 92.2%
3lhxA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.63 51.0 3.84e-01 87.8% 87.7%
1z2aA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 51.0 4.53e-01 88.7% 92.7%
7xg9A01 3.20.20.220 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 0.62 45.0 3.42e-01 76.5% 86.6%
3tb6A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.61 53.0 5.06e-01 96.5% 92.8%
1kjnA00 3.40.50.10160 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › MTH777-like 0.61 49.0 4.53e-01 87.8% 96.1%
4bfcA00 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.60 51.0 4.30e-01 93.0% 82.9%
4rxtA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.60 52.0 4.98e-01 96.5% 90.5%
3g85A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.59 52.0 4.89e-01 96.5% 87.4%
3dzvA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.59 48.0 3.72e-01 87.8% 59.1%
3l6uA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.59 53.0 5.14e-01 96.5% 92.9%
4irxA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.59 53.0 5.09e-01 100.0% 99.3%
2f46A00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.59 43.0 4.05e-01 92.2% 62.7%
3loqA02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.58 43.0 4.19e-01 78.3% 92.2%
2qu7A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.57 50.0 4.82e-01 96.5% 91.5%
7mi0A01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.57 49.0 4.26e-01 96.5% 81.2%
1to3A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.57 44.0 3.34e-01 83.5% 88.7%
3cs3A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.57 50.0 4.83e-01 96.5% 89.1%
6xzqA01 3.40.91.90 Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › Influenza RNA-dependent RNA polymerase subunit PA, endonuclease domain 0.56 44.0 3.93e-01 82.6% 81.5%
3mc1A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.56 47.0 4.31e-01 89.6% 94.6%
3ru6B00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.56 42.0 3.42e-01 78.3% 95.9%
2x6qA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.56 49.0 4.18e-01 99.1% 84.3%
2ffiA00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.56 44.0 3.34e-01 84.3% 80.6%
5aykA07 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.55 31.0 3.12e-01 73.0% 53.9%
4nesA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.55 47.0 4.20e-01 93.9% 85.9%
1j09A01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.55 39.0 3.93e-01 75.7% 92.6%
4kmrA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 48.0 4.74e-01 96.5% 91.2%
6ecpB01 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.55 47.0 4.36e-01 93.0% 76.6%
1bf6A00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.55 43.0 3.23e-01 84.3% 95.9%
2hoqA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.54 47.0 4.22e-01 93.9% 93.0%
2o3rA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 42.0 4.15e-01 82.6% 91.1%
4g2dA00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.54 44.0 3.32e-01 92.2% 91.7%
4hwgA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.53 45.0 4.07e-01 93.0% 87.9%
6hcdD00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.52 38.0 3.63e-01 75.7% 89.6%
1u5hA00 3.20.20.60 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains 0.52 43.0 3.50e-01 89.6% 77.1%
3a04A01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.52 43.0 3.41e-01 91.3% 94.0%
3pnzA00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.52 42.0 3.08e-01 87.8% 89.1%
2zc1A00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.52 43.0 3.16e-01 91.3% 89.5%
1d4oA00 3.40.50.1220 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain 0.52 40.0 3.53e-01 83.5% 84.7%
2fi1A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.52 41.0 4.10e-01 86.1% 94.3%
2yz2B00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 42.0 3.20e-01 86.1% 66.9%
3apoA06 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.52 30.0 3.11e-01 73.0% 56.6%
2rinA02 3.40.190.100 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Glycine betaine-binding periplasmic protein; domain 2 0.51 33.0 3.44e-01 81.7% 68.2%
3jvdB01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 44.0 4.34e-01 98.3% 91.8%
2p0oA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.50 42.0 3.36e-01 90.4% 87.6%
2efjA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.50 42.0 3.44e-01 90.4% 98.6%
3lftB02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.50 45.0 4.13e-01 97.4% 83.7%
ECOD (73)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4940296 2008.1.1.121 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › MTES_1575 0.93 75.0 8.24e-01 84.3% 100.0%
3964655 2008.1.1.17 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF559 0.91 82.0 8.45e-01 94.8% 98.2%
3163838 2008.1.1.17 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF559 0.90 82.0 8.25e-01 94.8% 95.7%
4940595 2008.1.1.14 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Vsr 0.90 75.0 8.05e-01 88.7% 99.0%
5027476 2008.1.1.17 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF559 0.89 74.0 8.00e-01 87.0% 99.0%
5069856 2008.1.1.17 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF559 0.88 70.0 7.10e-01 85.2% 83.5%
4467650 2008.1.1.167 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Vsr, DUF559 0.86 72.0 6.78e-01 87.0% 85.9%
5038840 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.86 68.0 7.32e-01 87.0% 95.0%
3979018 2008.1.1.14 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Vsr 0.86 78.0 7.00e-01 94.8% 86.0%
3958985 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.85 70.0 7.47e-01 85.2% 100.0%
1282261 2008.1.1.17 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF559 0.85 67.0 7.31e-01 87.0% 97.9%
3964563 2008.1.1.14 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Vsr 0.84 73.0 6.78e-01 90.4% 87.1%
3962618 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.83 72.0 7.13e-01 91.3% 90.0%
3953141 2008.1.1.121 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › MTES_1575 0.82 69.0 7.21e-01 88.7% 100.0%
4271425 2008.1.1.81 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF2726 0.82 70.0 6.17e-01 90.4% 75.6%
4026799 2008.1.1.86 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAP 0.80 69.0 6.92e-01 90.4% 95.7%
4025795 2008.1.1.86 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAP 0.80 68.0 6.50e-01 89.6% 93.8%
4927469 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.80 69.0 6.69e-01 91.3% 92.8%
3808239 2008.1.1.86 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAP 0.80 64.0 6.83e-01 83.5% 100.0%
4027358 2008.1.1.86 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAP 0.80 69.0 6.70e-01 90.4% 85.6%
4995749 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.79 69.0 7.08e-01 91.3% 100.0%
4030490 2008.1.1.124 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF6831 0.79 64.0 6.65e-01 84.3% 100.0%
4995722 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.78 64.0 6.78e-01 85.2% 100.0%
4028756 2008.1.1.86 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAP 0.77 68.0 6.04e-01 93.9% 68.8%
4027449 2008.1.1.86 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAP 0.77 66.0 6.85e-01 89.6% 99.0%
3673147 2008.1.1.86 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAP 0.75 66.0 6.65e-01 93.0% 96.5%
4025196 109.4.1.315 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RAP 0.75 66.0 4.14e-01 95.7% 19.1%
4946865 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.75 57.0 5.82e-01 78.3% 100.0%
5081837 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.72 59.0 6.20e-01 91.3% 98.1%
4929290 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.72 58.0 5.65e-01 85.2% 98.4%
4997269 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.71 59.0 5.13e-01 87.8% 88.8%
5062060 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.71 53.0 5.75e-01 93.0% 93.7%
3386984 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.68 49.0 5.41e-01 92.2% 94.4%
4951545 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.67 55.0 4.96e-01 93.0% 65.3%
3736568 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.67 58.0 5.24e-01 93.9% 87.7%
4152187 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.66 54.0 5.50e-01 89.6% 100.0%
4971488 2008.1.1.141 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_19 0.64 53.0 5.04e-01 89.6% 97.0%
4988932 2008.1.1.141 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_19 0.63 51.0 4.98e-01 86.1% 90.4%
4942425 2008.1.1.141 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_19 0.63 52.0 5.06e-01 87.8% 96.8%
4561496 2008.1.1.141 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_19 0.63 53.0 5.04e-01 92.2% 97.8%
5076022 2008.1.1.141 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_19 0.63 51.0 5.23e-01 87.0% 100.0%
5010842 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.62 55.0 4.98e-01 96.5% 89.7%
4446863 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.62 55.0 5.41e-01 98.3% 92.7%
5002052 7512.1.1.3 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.62 54.0 4.55e-01 96.5% 77.5%
5004773 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.62 51.0 5.26e-01 91.3% 91.8%
5082429 2008.1.1.141 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_19 0.62 49.0 4.85e-01 86.1% 88.8%
3971608 7512.1.1.32 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_trans_1_4 0.62 54.0 4.45e-01 95.7% 76.6%
3571634 2008.1.1.89 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › SCRE 0.62 52.0 4.70e-01 93.0% 76.2%
5067595 2008.1.1.141 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_19 0.62 52.0 4.89e-01 92.2% 88.6%
4155847 2008.1.1.141 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_19 0.62 50.0 4.83e-01 87.8% 97.7%
5009348 2008.1.1.108 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF234 0.61 46.0 4.78e-01 79.1% 97.1%
5035030 2007.1.3.2 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › UPF0004 0.61 50.0 4.92e-01 87.8% 82.4%
5057960 2007.1.3.2 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › UPF0004 0.61 54.0 5.16e-01 96.5% 83.0%
4995282 2008.1.1.141 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_19 0.61 47.0 4.81e-01 80.9% 93.6%
4660505 2008.1.1.186 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_9 0.60 50.0 4.61e-01 90.4% 69.7%
5063644 2008.1.1.141 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_19 0.60 51.0 5.19e-01 93.0% 100.0%
4196387 2005.1.1.11 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.60 42.0 3.35e-01 70.4% 46.5%
4931384 2008.1.1.141 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_19 0.60 51.0 5.06e-01 92.2% 96.7%
4967964 2008.1.1.141 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_19 0.60 52.0 5.06e-01 93.0% 93.6%
4933239 2007.1.3.2 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › UPF0004 0.60 50.0 4.75e-01 90.4% 78.5%
5060649 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.60 52.0 5.15e-01 93.9% 90.0%
5031044 2008.1.1.141 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_19 0.59 50.0 4.93e-01 92.2% 92.8%
4947990 2008.1.1.218 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › HTH_3 0.59 50.0 5.07e-01 92.2% 100.0%
384421 2005.1.1.3 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.58 43.0 4.15e-01 78.3% 89.5%
4311371 2008.1.1.6 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 0.56 49.0 4.86e-01 95.7% 96.7%
2327192 2004.7.1.0 a/b three-layered sandwiches › P-loop domains-like › VP4 N-terminal domain › VP4 N-terminal domain 0.56 46.0 4.30e-01 91.3% 75.3%
5082574 2008.1.1.4 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 0.56 40.0 3.59e-01 95.7% 53.1%
3394801 2007.1.4.3 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Phosphofructokinase N-terminal domain › NAD_kinase 0.56 48.0 4.11e-01 93.9% 67.6%
5056503 7588.1.1.0 a/b three-layered sandwiches › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase 0.55 38.0 3.98e-01 74.8% 80.0%
1252850 2007.1.2.11 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_4 0.54 40.0 4.29e-01 96.5% 90.8%
4516732 2003.6.1.3 a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK 0.54 45.0 3.49e-01 90.4% 74.2%
153348 2002.1.1.88 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PTE 0.54 44.0 3.32e-01 92.2% 91.7%
1684449 2002.1.1.88 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PTE 0.53 44.0 3.25e-01 92.2% 92.4%
D3 medium residues 227-284
PDB
D4 medium residues 285-343
PDB
Domain cluster: representative
CATH (53)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 52.0 4.88e-01 71.2% 56.9%
2lfwA01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.77 54.0 3.96e-01 76.3% 30.5%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 51.0 4.61e-01 76.3% 52.5%
3ulqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 50.0 5.11e-01 71.2% 70.7%
1fc3B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 51.0 4.21e-01 71.2% 53.5%
5y9sC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 51.0 4.53e-01 72.9% 80.5%
4gvpA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.73 49.0 3.31e-01 72.9% 19.9%
1le8A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.72 52.0 5.50e-01 76.3% 94.3%
6v7xB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 50.0 5.19e-01 72.9% 94.6%
2esnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 49.0 4.27e-01 81.4% 47.2%
1s7oB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 49.0 4.04e-01 71.2% 40.0%
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 50.0 4.48e-01 72.9% 53.8%
6jqsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 52.0 5.04e-01 78.0% 80.6%
4i2oA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 54.0 4.84e-01 81.4% 93.8%
2x48A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.70 46.0 4.84e-01 72.9% 74.1%
4pcqA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 49.0 5.20e-01 72.9% 86.0%
3vfzB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 51.0 4.98e-01 81.4% 71.4%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.69 51.0 5.24e-01 83.1% 83.9%
1rr7A02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.69 52.0 5.63e-01 86.4% 100.0%
2rn7A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 56.0 5.46e-01 89.8% 86.4%
1l3lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 47.0 4.67e-01 72.9% 84.1%
2dbbB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 51.0 5.24e-01 83.1% 85.5%
1o3sA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 50.0 4.74e-01 78.0% 84.1%
4fcyA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.68 55.0 5.12e-01 94.9% 82.1%
1k78A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 50.0 4.93e-01 83.1% 74.2%
2f2cA02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.66 50.0 4.15e-01 81.4% 52.8%
2p5vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 47.0 4.93e-01 78.0% 86.5%
2ia0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 49.0 5.10e-01 84.7% 88.9%
1g3nC01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.65 51.0 4.10e-01 86.4% 81.7%
7pzaA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 51.0 4.51e-01 84.7% 93.0%
1xwyA00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.65 45.0 2.95e-01 72.9% 24.2%
2elhA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 51.0 4.96e-01 86.4% 80.3%
2om6A02 1.10.150.400 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.65 48.0 4.41e-01 79.7% 82.3%
2cfxA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 48.0 5.16e-01 86.4% 96.0%
2cobA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.64 44.0 4.78e-01 74.6% 97.7%
4ev0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 49.0 4.48e-01 83.1% 100.0%
2jn6A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.64 49.0 4.38e-01 84.7% 68.2%
1l0oC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 51.0 5.22e-01 88.1% 100.0%
4nvsA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.62 49.0 3.62e-01 86.4% 98.7%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 48.0 4.69e-01 91.5% 76.1%
5trdA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 47.0 4.22e-01 84.7% 81.0%
2kt0A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.61 43.0 4.65e-01 74.6% 100.0%
2v79A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 46.0 3.75e-01 84.7% 67.0%
3h4cA02 1.10.472.110 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › 0.60 45.0 3.82e-01 86.4% 53.6%
2m8gX00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.60 45.0 4.28e-01 81.4% 68.6%
2r3sB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 48.0 4.34e-01 91.5% 80.2%
2ia2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 45.0 4.40e-01 88.1% 94.1%
4yifF00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 45.0 3.59e-01 88.1% 51.5%
2ip2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 46.0 4.18e-01 91.5% 81.0%
5d0yA00 1.10.1760.20 Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › 0.55 39.0 3.01e-01 78.0% 38.7%
2euiA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.54 37.0 2.86e-01 72.9% 77.9%
2v57A00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.54 39.0 2.95e-01 81.4% 33.3%
3euoA02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.52 40.0 3.06e-01 88.1% 62.4%
ECOD (59)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4460997 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.78 56.0 6.26e-01 78.0% 100.0%
3502245 101.1.6.13 alpha arrays › HTH › HTH › TrpR › HTH_28 0.77 53.0 5.92e-01 74.6% 95.6%
4131887 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.76 52.0 4.70e-01 76.3% 53.2%
5073467 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.75 51.0 5.67e-01 72.9% 91.1%
4159688 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.75 51.0 4.86e-01 76.3% 60.0%
4968186 101.1.6.12 alpha arrays › HTH › HTH › TrpR › HTH_23 0.75 50.0 5.58e-01 78.0% 91.1%
4976095 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.75 50.0 5.17e-01 71.2% 74.5%
4007717 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.75 51.0 4.59e-01 76.3% 52.5%
5070906 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.74 56.0 5.66e-01 81.4% 81.7%
4624372 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.74 52.0 4.34e-01 72.9% 69.5%
3988724 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.74 60.0 5.97e-01 88.1% 88.3%
4992862 101.1.6.12 alpha arrays › HTH › HTH › TrpR › HTH_23 0.74 56.0 5.16e-01 84.7% 64.0%
2440126 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.73 50.0 4.49e-01 76.3% 51.2%
3973615 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.73 57.0 5.52e-01 84.7% 75.4%
4090141 101.1.1.494 alpha arrays › HTH › HTH › Three-helical HTH › HTH_29 0.73 53.0 5.32e-01 78.0% 80.0%
4659976 101.1.1.25 alpha arrays › HTH › HTH › Three-helical HTH › DUF433 0.73 62.0 4.71e-01 96.6% 91.6%
3879118 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.72 54.0 5.56e-01 83.1% 87.3%
5038587 101.1.6.12 alpha arrays › HTH › HTH › TrpR › HTH_23 0.71 53.0 5.36e-01 84.7% 80.0%
5003692 101.1.6.12 alpha arrays › HTH › HTH › TrpR › HTH_23 0.71 53.0 5.20e-01 84.7% 73.8%
3889552 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.70 55.0 5.25e-01 86.4% 92.9%
5034428 101.1.2.139 alpha arrays › HTH › HTH › winged helix domain › HTH_23 0.70 50.0 5.30e-01 78.0% 88.0%
5041148 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.70 48.0 4.55e-01 71.2% 60.0%
5055914 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 55.0 5.70e-01 91.5% 90.9%
5068679 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.70 52.0 5.36e-01 83.1% 85.5%
5004314 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.69 52.0 4.85e-01 84.7% 64.0%
1035813 101.1.6.2 alpha arrays › HTH › HTH › TrpR › HTH_7 0.69 51.0 5.37e-01 83.1% 90.4%
5079698 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.69 51.0 5.09e-01 78.0% 76.7%
3736326 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.69 53.0 5.17e-01 83.1% 76.9%
5076741 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.69 53.0 5.67e-01 86.4% 98.0%
4945903 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 50.0 5.20e-01 78.0% 85.5%
3544647 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.69 52.0 5.06e-01 81.4% 73.8%
3990848 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.69 49.0 5.08e-01 78.0% 81.8%
3787936 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.69 53.0 5.35e-01 88.1% 83.3%
3966780 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 51.0 4.37e-01 78.0% 74.4%
5058496 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.69 51.0 4.86e-01 83.1% 67.1%
3981080 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.69 51.0 4.46e-01 78.0% 78.8%
3618452 101.1.1.52 alpha arrays › HTH › HTH › Three-helical HTH › BrkDBD 0.69 51.0 5.28e-01 83.1% 87.3%
3941182 101.1.1.52 alpha arrays › HTH › HTH › Three-helical HTH › BrkDBD 0.69 52.0 5.11e-01 83.1% 83.1%
4984317 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.68 50.0 5.18e-01 78.0% 83.6%
5060805 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 49.0 4.12e-01 81.4% 45.0%
3999777 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.68 48.0 5.26e-01 79.7% 100.0%
5077607 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.67 50.0 5.04e-01 83.1% 78.3%
4875610 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.67 49.0 4.32e-01 78.0% 72.1%
3527457 101.1.1.52 alpha arrays › HTH › HTH › Three-helical HTH › BrkDBD 0.67 51.0 5.24e-01 83.1% 92.7%
5049870 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.67 49.0 4.69e-01 83.1% 67.1%
3986748 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.66 52.0 4.44e-01 83.1% 76.7%
4947593 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 49.0 5.03e-01 83.1% 85.5%
3949224 101.1.1.18 alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.66 47.0 4.49e-01 78.0% 64.3%
4975892 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.66 48.0 4.85e-01 83.1% 78.3%
3981547 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.66 51.0 4.31e-01 83.1% 68.4%
3224978 101.1.1.52 alpha arrays › HTH › HTH › Three-helical HTH › BrkDBD 0.65 49.0 4.73e-01 83.1% 86.8%
5062184 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.65 48.0 4.83e-01 84.7% 80.0%
5038325 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 48.0 5.19e-01 83.1% 95.9%
2554 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.64 51.0 4.53e-01 89.8% 69.7%
3486395 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.63 47.0 4.13e-01 81.4% 68.9%
4979728 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 49.0 4.36e-01 84.7% 77.6%
5010782 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 47.0 3.95e-01 83.1% 65.7%
3410877 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.62 47.0 4.52e-01 88.1% 71.4%
4984064 101.1.1.61 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AsnC-type 0.60 46.0 4.72e-01 89.8% 90.9%