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LacPavin_0818_WC40_scaffold_238879_prodigal-single.1__X__X__00054

Bact-Vir

LacPavin_0818_WC40_scaffold_238879_prodigal-single.1__X__X__00054

Identity

Kingdom:
phage

Quality

79.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-93
PDB
Domain cluster: representative
CATH (45)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5ygbA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 52.0 5.56e-01 94.5% 80.0%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.76 51.0 5.99e-01 90.1% 98.4%
3a5zB01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.75 50.0 5.88e-01 90.1% 98.4%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 48.0 5.61e-01 95.6% 96.8%
3askA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 48.0 5.63e-01 87.9% 100.0%
3m9qA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 54.0 5.99e-01 94.5% 98.6%
7oc3A01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 51.0 5.11e-01 94.5% 73.9%
4iupA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 53.0 5.87e-01 96.7% 100.0%
1ts9A00 2.30.30.210 Mainly Beta › Roll › SH3 type barrels. › Ribonuclease P/MRP, subunit p29 0.70 49.0 4.78e-01 94.5% 67.3%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.67 50.0 5.34e-01 96.7% 90.9%
3urgA02 2.30.30.530 Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain 0.66 44.0 5.10e-01 85.7% 98.4%
2cmgA01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.63 35.0 4.40e-01 70.3% 96.1%
1iy9A02 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.63 36.0 4.44e-01 72.5% 96.2%
2qggA02 2.30.30.240 Mainly Beta › Roll › SH3 type barrels. › PRC-barrel domain 0.63 48.0 5.01e-01 98.9% 91.6%
2vgmA01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.63 54.0 4.88e-01 96.7% 69.7%
2budA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 49.0 4.92e-01 100.0% 82.6%
2e5wA01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.62 35.0 4.25e-01 72.5% 89.3%
2avwD01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.61 53.0 4.58e-01 96.7% 70.2%
1w4sA00 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.61 50.0 4.23e-01 87.9% 65.8%
3o4fC01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.60 34.0 4.22e-01 72.5% 98.0%
7cceA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.60 51.0 4.26e-01 92.3% 58.9%
4bb7B00 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.59 52.0 3.80e-01 94.5% 44.9%
1inlC02 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.59 34.0 3.93e-01 73.6% 79.7%
1uirA01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.59 33.0 4.13e-01 73.6% 96.2%
1x6oA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 41.0 4.44e-01 72.5% 97.5%
2o07A01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.59 35.0 4.18e-01 81.3% 91.5%
1r8nA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.58 49.0 3.94e-01 93.4% 94.6%
3k6yA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.58 45.0 4.30e-01 97.8% 71.0%
3fyfA00 2.40.128.410 Mainly Beta › Beta Barrel › Lipocalin › 0.58 51.0 4.38e-01 100.0% 88.6%
6cnhA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.58 39.0 4.12e-01 87.9% 78.8%
5hmaA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.58 42.0 4.08e-01 97.8% 68.3%
8aimG01 3.10.450.20 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Bacteriophage PBS2, uracil-glycosylase inhibitor 0.57 37.0 3.86e-01 75.8% 72.8%
4b6mB00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.57 44.0 4.74e-01 86.8% 94.9%
5z8lA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.57 50.0 4.55e-01 94.5% 85.7%
1cv8A00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.56 48.0 3.98e-01 96.7% 51.4%
3askA02 2.30.30.1150 Mainly Beta › Roll › SH3 type barrels. › 0.56 49.0 4.12e-01 96.7% 57.0%
6vilA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.56 48.0 4.10e-01 94.5% 89.0%
2gtlO02 2.40.128.620 Mainly Beta › Beta Barrel › Lipocalin › 0.55 48.0 3.94e-01 96.7% 86.5%
1whlA00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.54 45.0 4.47e-01 91.2% 90.5%
3dmbA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.53 41.0 3.59e-01 98.9% 53.4%
1tqzA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 44.0 3.97e-01 91.2% 89.4%
3a2yA00 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.52 44.0 3.57e-01 97.8% 47.6%
2gtlM02 2.40.128.620 Mainly Beta › Beta Barrel › Lipocalin › 0.51 45.0 3.73e-01 100.0% 75.9%
5xk2A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.51 45.0 3.26e-01 100.0% 94.1%
4b3fX02 2.40.30.270 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.50 44.0 4.36e-01 95.6% 93.9%
ECOD (64)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3741680 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 47.0 5.83e-01 85.7% 100.0%
5051313 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 51.0 5.85e-01 89.0% 95.4%
3798312 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.76 54.0 6.03e-01 93.4% 95.7%
3570369 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.75 50.0 5.10e-01 94.5% 70.0%
3394215 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.73 52.0 5.06e-01 94.5% 67.0%
3410370 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 52.0 5.86e-01 92.3% 97.1%
3347795 4.1.1.94 beta barrels › SH3 › SH3 › SH3 › SAWADEE 0.71 53.0 5.65e-01 95.6% 88.7%
5032461 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 49.0 5.54e-01 90.1% 100.0%
4377781 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.71 55.0 5.77e-01 94.5% 93.8%
3959531 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 49.0 5.41e-01 93.4% 92.9%
4982354 4.7.1.0 beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 0.70 47.0 5.46e-01 86.8% 96.9%
4929262 4.11.1.2 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 0.70 52.0 4.37e-01 95.6% 46.5%
3616769 4.1.1.287 beta barrels › SH3 › SH3 › SH3 › DUF5641 0.69 47.0 4.72e-01 93.4% 67.4%
3441143 4.1.1.94 beta barrels › SH3 › SH3 › SH3 › SAWADEE 0.69 53.0 5.19e-01 97.8% 74.0%
5073368 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 47.0 5.21e-01 86.8% 90.0%
4000622 4.1.1.287 beta barrels › SH3 › SH3 › SH3 › DUF5641 0.69 48.0 4.37e-01 94.5% 54.2%
5024617 4.15.1.2 beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 0.68 58.0 5.72e-01 95.6% 86.3%
3237640 4.1.1.287 beta barrels › SH3 › SH3 › SH3 › DUF5641 0.68 48.0 4.49e-01 96.7% 60.0%
3586469 4.1.1.287 beta barrels › SH3 › SH3 › SH3 › DUF5641 0.68 48.0 4.96e-01 94.5% 77.6%
5038850 4.7.1.1 beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.68 48.0 4.85e-01 96.7% 74.4%
4425420 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.68 55.0 5.65e-01 95.6% 92.9%
4040055 4.26.1.1 beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 › Cren7 0.67 40.0 4.84e-01 75.8% 93.1%
4152374 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 55.0 5.70e-01 95.6% 95.2%
3828371 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.67 52.0 5.37e-01 97.8% 88.2%
5061113 375.1.1.299 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › CPxCG_zf 0.67 40.0 4.87e-01 76.9% 98.2%
3550699 4.8.1.10 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like 0.66 52.0 5.12e-01 94.5% 78.9%
3770804 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 53.0 5.50e-01 93.4% 95.3%
3866907 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.65 53.0 5.51e-01 92.3% 95.3%
4968081 375.1.1.299 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › CPxCG_zf 0.65 39.0 4.76e-01 76.9% 100.0%
3707121 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 49.0 5.37e-01 87.9% 97.3%
5034832 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 47.0 5.24e-01 90.1% 100.0%
3767452 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 51.0 4.82e-01 86.8% 90.9%
3675120 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.63 50.0 5.16e-01 93.4% 90.6%
3687023 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 52.0 5.03e-01 87.9% 92.0%
3999482 4.1.1.311 beta barrels › SH3 › SH3 › SH3 › BRWD_AD 0.63 57.0 5.30e-01 97.8% 98.2%
3490245 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 51.0 5.19e-01 91.2% 88.9%
2410381 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.62 48.0 5.12e-01 95.6% 94.9%
4952973 4.15.1.0 beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like 0.61 51.0 5.14e-01 96.7% 93.3%
3575867 4.1.1.20 beta barrels › SH3 › SH3 › SH3 › BAH 0.61 53.0 4.55e-01 93.4% 74.6%
3721700 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 54.0 4.46e-01 97.8% 69.4%
5016546 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.60 46.0 4.97e-01 96.7% 98.7%
3268160 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 49.0 4.98e-01 91.2% 87.8%
3828614 4.1.1.158 beta barrels › SH3 › SH3 › SH3 › DUF3444 0.59 52.0 4.91e-01 95.6% 84.5%
4174957 4.1.1.20 beta barrels › SH3 › SH3 › SH3 › BAH 0.59 52.0 4.07e-01 96.7% 55.4%
3310577 4.1.1.158 beta barrels › SH3 › SH3 › SH3 › DUF3444 0.59 51.0 4.97e-01 95.6% 85.0%
4022153 4.1.1.225 beta barrels › SH3 › SH3 › SH3 › DUF7025 0.59 52.0 4.45e-01 97.8% 64.1%
3736329 4.1.1.225 beta barrels › SH3 › SH3 › SH3 › DUF7025 0.59 50.0 3.96e-01 92.3% 47.2%
3836457 4.1.1.20 beta barrels › SH3 › SH3 › SH3 › BAH 0.59 51.0 4.30e-01 95.6% 57.3%
3188394 4.8.1.22 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF7025 0.59 52.0 4.75e-01 97.8% 78.3%
3190995 4.8.1.22 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF7025 0.58 52.0 4.19e-01 98.9% 52.6%
4012953 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.58 51.0 4.34e-01 97.8% 60.7%
3233524 4.1.1.20 beta barrels › SH3 › SH3 › SH3 › BAH 0.58 50.0 4.00e-01 93.4% 58.9%
3687369 4.1.1.225 beta barrels › SH3 › SH3 › SH3 › DUF7025 0.58 51.0 4.99e-01 98.9% 92.0%
3177842 4.1.1.18 beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.57 51.0 4.63e-01 96.7% 75.8%
3670066 4.1.1.20 beta barrels › SH3 › SH3 › SH3 › BAH 0.57 51.0 4.26e-01 96.7% 64.5%
3540253 4.1.1.78 beta barrels › SH3 › SH3 › SH3 › TTD 0.57 50.0 5.00e-01 96.7% 94.7%
4020096 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.57 51.0 4.41e-01 98.9% 65.0%
3831409 4.1.1.158 beta barrels › SH3 › SH3 › SH3 › DUF3444 0.57 49.0 4.81e-01 95.6% 86.0%
3650212 4.1.1.190 beta barrels › SH3 › SH3 › SH3 › Transposase_23 0.56 49.0 4.82e-01 96.7% 96.0%
5032977 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.55 42.0 4.42e-01 97.8% 93.8%
4073608 1.1.5.57 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Mycop_pep_DUF31 0.55 44.0 3.57e-01 87.9% 53.3%
573 4.1.1.18 beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.54 45.0 4.47e-01 91.2% 90.5%
3601811 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.54 46.0 3.66e-01 94.5% 47.6%
3949052 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.53 45.0 4.53e-01 95.6% 93.3%
D2 high residues 134-205
PDB
Domain cluster: representative
CATH (56)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.73 61.0 6.28e-01 98.6% 97.0%
3fb9B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.70 60.0 5.73e-01 98.6% 81.0%
2f5kA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 47.0 5.35e-01 81.9% 100.0%
5kcoA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 49.0 5.30e-01 93.1% 91.5%
3n8hA02 3.30.1300.10 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › Pantoate-beta-alanine ligase, C-terminal domain 0.68 41.0 4.05e-01 79.2% 56.6%
2efiA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 50.0 4.53e-01 97.2% 58.0%
1lomA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.67 34.0 3.00e-01 77.8% 33.7%
4qqgG00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 55.0 5.58e-01 100.0% 94.4%
6bogA02 2.30.30.930 Mainly Beta › Roll › SH3 type barrels. › 0.65 49.0 5.24e-01 97.2% 100.0%
3a46A01 3.20.190.10 Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal 0.64 56.0 4.60e-01 100.0% 70.6%
7xpkA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.63 57.0 4.53e-01 100.0% 62.1%
3k8uA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.63 51.0 4.25e-01 100.0% 49.6%
1gqyB02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.63 43.0 3.05e-01 70.8% 86.6%
2xepB01 3.10.450.280 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 50.0 4.25e-01 84.7% 82.5%
1xkgA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.63 55.0 3.67e-01 100.0% 32.2%
3pieC09 2.30.30.750 Mainly Beta › Roll › SH3 type barrels. › 0.63 55.0 5.01e-01 100.0% 75.8%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.63 47.0 4.89e-01 91.7% 89.2%
3c6kA02 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.62 43.0 4.78e-01 81.9% 92.9%
1sp4B00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.62 53.0 3.92e-01 100.0% 45.4%
1inlC02 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.61 41.0 4.33e-01 70.8% 78.1%
6aqgA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 52.0 4.14e-01 93.1% 91.5%
4epcA01 2.30.30.170 Mainly Beta › Roll › SH3 type barrels. › 0.61 50.0 4.84e-01 94.4% 95.1%
3rd7A00 2.40.160.210 Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain 0.60 44.0 2.99e-01 79.2% 62.5%
2lccA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 49.0 4.83e-01 90.3% 92.1%
2ra6C00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.60 51.0 4.15e-01 98.6% 76.2%
3gekA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.60 45.0 3.74e-01 81.9% 90.1%
2l3rA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.59 50.0 5.00e-01 98.6% 93.2%
2cztA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.59 51.0 4.06e-01 100.0% 75.5%
3u0aA00 2.40.160.210 Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain 0.58 43.0 2.95e-01 79.2% 59.4%
1m9sA04 2.30.30.170 Mainly Beta › Roll › SH3 type barrels. › 0.58 48.0 4.56e-01 94.4% 93.0%
3k7cA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 46.0 4.04e-01 87.5% 99.1%
3fzxA00 2.40.360.20 Mainly Beta › Beta Barrel › YmcC-like fold › 0.57 50.0 3.63e-01 100.0% 98.1%
2qggA02 2.30.30.240 Mainly Beta › Roll › SH3 type barrels. › PRC-barrel domain 0.57 48.0 4.64e-01 97.2% 88.0%
4epcA02 2.30.30.170 Mainly Beta › Roll › SH3 type barrels. › 0.57 46.0 4.71e-01 90.3% 98.6%
6i8xA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 45.0 3.59e-01 87.5% 64.4%
1b9mA03 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.56 42.0 4.25e-01 83.3% 80.3%
2p12A01 2.40.380.10 Mainly Beta › Beta Barrel › FomD barrel-like fold › FomD-like 0.56 47.0 3.63e-01 91.7% 55.3%
2x45A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 48.0 3.93e-01 100.0% 66.7%
2rceA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.56 41.0 3.69e-01 97.2% 54.7%
1wchA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.55 44.0 2.91e-01 87.5% 28.2%
1z47A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 34.0 3.98e-01 81.9% 91.8%
3kztA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 43.0 3.62e-01 87.5% 89.4%
3lygA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 44.0 3.75e-01 87.5% 86.7%
4b08A01 2.40.50.730 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.55 41.0 4.02e-01 81.9% 97.5%
1shyB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 42.0 2.63e-01 86.1% 30.2%
8aimG01 3.10.450.20 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Bacteriophage PBS2, uracil-glycosylase inhibitor 0.54 41.0 4.02e-01 83.3% 74.1%
3c96A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 42.0 3.24e-01 84.7% 47.0%
2as9B01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.54 40.0 3.59e-01 97.2% 56.4%
3nixB00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 42.0 2.66e-01 86.1% 38.7%
2xzhA00 2.130.10.110 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Clathrin heavy-chain terminal domain 0.53 39.0 2.55e-01 80.6% 22.9%
1reoA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 40.0 3.29e-01 84.7% 57.4%
3al9A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 45.0 2.77e-01 98.6% 77.5%
6aonA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 42.0 3.62e-01 94.4% 99.2%
2qzuA02 3.30.1120.10 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.51 34.0 3.25e-01 83.3% 58.8%
1uypA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.51 40.0 2.72e-01 87.5% 30.7%
1tqzA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 42.0 3.61e-01 95.8% 86.2%
ECOD (93)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4120629 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.77 63.0 6.26e-01 98.6% 85.3%
4936051 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 56.0 6.24e-01 90.3% 100.0%
5042986 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 58.0 6.29e-01 95.8% 98.3%
490 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.73 61.0 6.05e-01 100.0% 89.2%
4241924 4.1.1.93 beta barrels › SH3 › SH3 › SH3 › 40S_S4_C 0.72 51.0 4.81e-01 90.3% 60.0%
4118552 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.72 60.0 5.92e-01 100.0% 88.0%
4071917 4.1.1.111 beta barrels › SH3 › SH3 › SH3 › Tudor_RapA 0.71 48.0 5.46e-01 94.4% 100.0%
3570368 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.70 54.0 4.85e-01 98.6% 60.0%
3230872 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.69 50.0 4.03e-01 77.8% 77.1%
3730229 4.1.1.102 beta barrels › SH3 › SH3 › SH3 › Tudor_3 0.68 55.0 5.44e-01 98.6% 84.0%
3876680 4.8.1.6 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.68 55.0 4.93e-01 98.6% 64.0%
3782999 219.1.1.115 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › AIM3_BBC1_C 0.68 60.0 4.79e-01 100.0% 65.5%
3587906 4.1.1.46 beta barrels › SH3 › SH3 › SH3 › VEG 0.67 60.0 5.83e-01 100.0% 90.0%
5032809 4.11.1.0 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.67 51.0 4.25e-01 98.6% 46.2%
3289944 4.1.1.323 beta barrels › SH3 › SH3 › SH3 › WYL 0.67 57.0 5.31e-01 100.0% 76.7%
3224706 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.67 49.0 3.88e-01 77.8% 77.2%
3978997 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.66 58.0 5.30e-01 100.0% 74.7%
3829476 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.66 56.0 4.30e-01 97.2% 42.3%
3713334 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.66 51.0 5.45e-01 94.4% 100.0%
3925395 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.66 48.0 3.88e-01 77.8% 75.0%
3942912 4.1.1.323 beta barrels › SH3 › SH3 › SH3 › WYL 0.66 57.0 5.47e-01 100.0% 83.5%
3286662 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.66 55.0 5.00e-01 100.0% 68.0%
3917372 4.1.1.101 beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.66 49.0 4.85e-01 97.2% 76.0%
4505316 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 50.0 5.41e-01 100.0% 100.0%
3905549 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.65 52.0 4.62e-01 98.6% 60.0%
3953109 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.65 56.0 5.13e-01 100.0% 72.6%
4405469 4.1.1.248 beta barrels › SH3 › SH3 › SH3 › CABIT 0.65 58.0 5.30e-01 100.0% 78.9%
3947700 4.8.1.25 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DSRB 0.65 52.0 5.49e-01 95.8% 100.0%
3959770 4.31.1.0 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 0.65 55.0 5.18e-01 100.0% 76.7%
4545520 4.7.1.7 beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › WYL 0.65 55.0 5.26e-01 100.0% 81.2%
4002655 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 56.0 4.56e-01 98.6% 67.9%
3281618 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.64 56.0 5.10e-01 100.0% 80.0%
3281271 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.64 54.0 5.10e-01 100.0% 76.7%
3704395 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 51.0 5.35e-01 95.8% 96.9%
4466506 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 54.0 5.40e-01 98.6% 93.3%
165654 4.8.1.6 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.64 53.0 5.35e-01 98.6% 90.5%
3519122 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.64 55.0 5.20e-01 100.0% 78.9%
5080017 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.64 55.0 4.36e-01 100.0% 63.1%
3642926 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.64 54.0 4.05e-01 95.8% 42.7%
3924619 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 56.0 4.75e-01 98.6% 60.0%
3806552 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.64 56.0 4.29e-01 100.0% 67.1%
3738641 4.1.1.102 beta barrels › SH3 › SH3 › SH3 › Tudor_3 0.64 54.0 5.34e-01 100.0% 90.7%
3932647 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.63 54.0 5.12e-01 100.0% 80.0%
1117666 4.1.1.103 beta barrels › SH3 › SH3 › SH3 › SH3_12 0.63 56.0 5.34e-01 100.0% 88.2%
3589934 219.1.1.34 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C47 0.63 54.0 4.23e-01 100.0% 49.1%
3946297 4.1.1.111 beta barrels › SH3 › SH3 › SH3 › Tudor_RapA 0.63 49.0 4.94e-01 100.0% 87.1%
3579354 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.63 53.0 4.57e-01 91.7% 94.5%
3972550 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.63 54.0 4.91e-01 100.0% 71.0%
4124092 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 50.0 5.05e-01 98.6% 90.0%
5055172 3699.1.1.1 beta meanders › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermine_synt_N 0.62 42.0 4.66e-01 73.6% 90.9%
4054649 4.1.1.86 beta barrels › SH3 › SH3 › SH3 › GW 0.62 52.0 5.19e-01 93.1% 100.0%
4616207 4.1.1.448 beta barrels › SH3 › SH3 › SH3 › DUF5372 0.62 42.0 4.74e-01 84.7% 100.0%
3280641 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.62 53.0 4.82e-01 100.0% 71.0%
3166879 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.62 51.0 5.32e-01 97.2% 100.0%
5070306 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 55.0 4.93e-01 100.0% 90.0%
5032454 4.11.1.0 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.62 53.0 4.41e-01 98.6% 53.8%
4031510 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 53.0 4.96e-01 100.0% 78.9%
3786518 4.8.1.18 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Myosin_N 0.62 50.0 5.18e-01 93.1% 98.5%
4855772 219.1.1.1 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.61 53.0 4.22e-01 100.0% 60.8%
3928430 4.1.1.223 beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st 0.61 46.0 4.73e-01 95.8% 87.1%
3829754 4.1.1.158 beta barrels › SH3 › SH3 › SH3 › DUF3444 0.61 53.0 4.90e-01 100.0% 83.2%
3608562 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 52.0 4.07e-01 97.2% 90.6%
3622139 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.60 50.0 4.66e-01 98.6% 73.3%
3942442 12.3.1.25 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_36N 0.60 50.0 3.35e-01 91.7% 51.1%
3699995 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 50.0 5.08e-01 100.0% 95.7%
4537528 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 52.0 5.35e-01 97.2% 100.0%
4565130 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 52.0 4.73e-01 100.0% 73.7%
3619927 9.2.1.6 beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › DUF7042 0.60 50.0 4.26e-01 91.7% 90.4%
3421095 3521.1.1.4 a+b three layers › Polymerase basic protein 2 cap-binding domain › Polymerase basic protein 2 cap-binding domain › Polymerase basic protein 2 cap-binding domain › SWIM 0.60 42.0 3.93e-01 73.6% 83.3%
3737837 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 48.0 5.05e-01 95.8% 100.0%
3636503 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.59 51.0 5.19e-01 100.0% 98.6%
5003245 243.8.1.0 a+b two layers › Cystatin-like › Uracil-DNA glycosylase inhibitor protein › Uracil-DNA glycosylase inhibitor protein 0.59 42.0 4.33e-01 83.3% 78.6%
3812766 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.59 49.0 5.04e-01 95.8% 97.1%
3687350 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 40.0 4.41e-01 81.9% 90.9%
3598659 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 45.0 2.82e-01 81.9% 36.9%
3174977 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.58 50.0 4.54e-01 94.4% 88.4%
3656401 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 51.0 5.10e-01 100.0% 97.3%
3696868 319.1.1.3 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS 0.57 40.0 3.41e-01 73.6% 65.0%
2978978 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.57 48.0 4.75e-01 95.8% 90.7%
4600473 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.57 44.0 3.58e-01 83.3% 48.1%
3972820 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.57 47.0 4.62e-01 93.1% 95.0%
5044389 4.26.1.0 beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 0.57 38.0 4.42e-01 79.2% 100.0%
5063379 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.57 42.0 3.25e-01 98.6% 32.8%
4882197 219.1.1.28 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP 0.56 48.0 4.12e-01 100.0% 60.2%
4594302 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.55 39.0 3.38e-01 83.3% 47.0%
3234660 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.55 44.0 3.04e-01 87.5% 32.4%
4443040 2.4.1.1 beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.55 38.0 3.42e-01 83.3% 51.0%
3399366 9.14.1.3 beta barrels › Lipocalins/Streptavidin › Uncharacterized protein YLR301W › Uncharacterized protein YLR301W › DUF7042 0.54 45.0 3.67e-01 93.1% 95.7%
3587789 2.4.1.0 beta barrels › OB-fold › MOP-like › MOP-like 0.54 36.0 3.27e-01 79.2% 47.6%
4235194 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.54 38.0 3.19e-01 75.0% 61.6%
3970949 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.53 38.0 3.27e-01 75.0% 65.2%
3969569 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.53 38.0 4.14e-01 76.4% 91.7%
4373021 2.4.1.6 beta barrels › OB-fold › MOP-like › MOP-like › CysA_C_terminal 0.52 39.0 3.54e-01 80.6% 71.7%