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LacPavin_0818_WC40_scaffold_238879_prodigal-single.1__X__X__00100
Bact-VirLacPavin_0818_WC40_scaffold_238879_prodigal-single.1__X__X__00100
Identity
- Kingdom:
- phage
Quality
80.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 18-113
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1x6gA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.80 | 44.0 | 4.80e-01 | 97.9% | 65.4% |
| 2d9tA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.78 | 37.0 | 5.07e-01 | 93.8% | 89.8% |
| 1lckA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.78 | 43.0 | 5.36e-01 | 97.9% | 88.1% |
| 1x6bA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.77 | 42.0 | 5.07e-01 | 97.9% | 81.2% |
| 1b7tA02 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.76 | 35.0 | 4.63e-01 | 94.8% | 80.8% |
| 6vlfA03 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.74 | 40.0 | 5.05e-01 | 96.9% | 89.7% |
| 4fssB00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.74 | 42.0 | 5.11e-01 | 97.9% | 88.5% |
| 2l89A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 42.0 | 4.02e-01 | 94.8% | 50.0% |
| 1zuuA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.70 | 38.0 | 4.83e-01 | 95.8% | 92.9% |
| 3kxtA00 | 2.30.30.610 | Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 | 0.67 | 34.0 | 4.26e-01 | 89.6% | 82.1% |
| 4iupA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 37.0 | 4.22e-01 | 95.8% | 75.0% |
| 4ld6A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 39.0 | 3.65e-01 | 75.0% | 64.1% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3557649 | 4.8.1.20 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › PWP3A-B_N | 0.77 | 42.0 | 4.06e-01 | 94.8% | 48.6% |
| 3750522 | 4.1.1.218 ↗ | beta barrels › SH3 › SH3 › SH3 › PWP3A-B_N | 0.77 | 41.0 | 3.97e-01 | 94.8% | 46.4% |
| 3791430 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 41.0 | 5.24e-01 | 97.9% | 92.7% |
| 4976092 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 40.0 | 4.12e-01 | 97.9% | 54.4% |
| 3216746 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.75 | 41.0 | 5.27e-01 | 97.9% | 94.5% |
| 3578855 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 42.0 | 4.54e-01 | 97.9% | 66.3% |
| 3757490 | 4.1.1.248 ↗ | beta barrels › SH3 › SH3 › SH3 › CABIT | 0.65 | 42.0 | 4.29e-01 | 97.9% | 66.3% |
| 3826141 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 46.0 | 4.76e-01 | 95.8% | 82.2% |
| 3473981 | 4.1.1.12 ↗ | beta barrels › SH3 › SH3 › SH3 › PWWP | 0.58 | 44.0 | 4.06e-01 | 95.8% | 61.6% |
| 5044388 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.58 | 30.0 | 3.83e-01 | 87.5% | 92.0% |
| 4336918 | 3529.1.1.2 ↗ | beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Vault_2 | 0.53 | 31.0 | 3.57e-01 | 79.2% | 80.0% |
| 4212887 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.52 | 33.0 | 3.54e-01 | 95.8% | 76.2% |
| 3637448 | 220.1.1.9 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Voldacs | 0.51 | 44.0 | 3.65e-01 | 97.9% | 74.4% |