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LacPavin_0818_WC40_scaffold_238879_prodigal-single.1__X__X__00107
Bact-VirLacPavin_0818_WC40_scaffold_238879_prodigal-single.1__X__X__00107
Identity
- Kingdom:
- phage
Quality
62.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 74-153
D2
high
residues 173-279
D3
high
residues 377-738
Domain cluster:
representative
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5ikuA01 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.69 | 20.0 | 3.82e-01 | 98.3% | 86.5% |
| 1lnsA04 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.69 | 33.0 | 4.53e-01 | 92.8% | 87.1% |
| 2wz8A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.66 | 23.0 | 3.71e-01 | 98.3% | 80.0% |
| 4xuoA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.66 | 26.0 | 3.88e-01 | 99.4% | 81.4% |
| 4il7A00 | 2.60.120.1300 | Mainly Beta › Sandwich › Jelly Rolls › | 0.66 | 18.0 | 3.83e-01 | 95.6% | 100.0% |
| 4msvA01 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.65 | 26.0 | 4.22e-01 | 99.2% | 95.6% |
| 3iiiA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.65 | 30.0 | 4.22e-01 | 99.2% | 86.7% |
| 1alyA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.65 | 26.0 | 4.15e-01 | 99.2% | 92.5% |
| 3a21A03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.63 | 20.0 | 3.67e-01 | 92.5% | 93.1% |
| 4mxwD00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.63 | 25.0 | 4.07e-01 | 98.9% | 95.6% |
| 1mpxA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.61 | 35.0 | 4.28e-01 | 98.9% | 84.5% |
| 1ju3A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.60 | 36.0 | 4.53e-01 | 99.4% | 96.8% |
| 4oq8A00 | 2.60.120.220 | Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain | 0.59 | 21.0 | 3.35e-01 | 98.1% | 79.9% |
| 1w8oA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.58 | 23.0 | 3.62e-01 | 99.2% | 89.0% |
| 2q1mA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 21.0 | 3.58e-01 | 96.7% | 100.0% |
| 2crmA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 14.0 | 2.93e-01 | 95.3% | 88.6% |
| 3gbwA00 | 2.60.120.820 | Mainly Beta › Sandwich › Jelly Rolls › PHR domain | 0.54 | 24.0 | 3.55e-01 | 99.2% | 91.3% |
| 1pk6C00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 21.0 | 3.48e-01 | 97.2% | 98.4% |
| 5l73A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 25.0 | 3.56e-01 | 98.6% | 90.8% |
| 1rh8A00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.53 | 21.0 | 3.29e-01 | 98.3% | 89.4% |
| 6i6rB03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 17.0 | 3.15e-01 | 98.9% | 99.0% |
| 3h7jA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 15.0 | 2.72e-01 | 99.2% | 77.2% |
| 4f3jA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 21.0 | 3.33e-01 | 97.8% | 93.7% |
| 7chkB01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 20.0 | 3.38e-01 | 96.7% | 99.2% |
| 1eerC01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 16.0 | 2.98e-01 | 91.4% | 94.8% |
| 5z06B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 14.0 | 2.82e-01 | 96.4% | 90.2% |
| 1dyoA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.50 | 23.0 | 3.45e-01 | 96.7% | 98.7% |
ECOD (46)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4960943 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.73 | 25.0 | 4.55e-01 | 97.8% | 100.0% |
| 1316605 | 10.32.1.50 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF5077 | 0.72 | 22.0 | 3.81e-01 | 99.4% | 76.3% |
| 3282993 | 10.32.1.31 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C | 0.70 | 28.0 | 4.35e-01 | 99.4% | 87.3% |
| 5041422 | 10.1.2.184 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PepX_C | 0.69 | 34.0 | 4.67e-01 | 100.0% | 88.4% |
| 5039229 | 10.1.2.184 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PepX_C | 0.69 | 32.0 | 4.52e-01 | 99.4% | 86.5% |
| 3704589 | 10.32.1.31 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C | 0.68 | 34.0 | 4.59e-01 | 99.7% | 87.7% |
| 5039956 | 10.1.2.184 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PepX_C | 0.68 | 33.0 | 4.52e-01 | 99.7% | 87.4% |
| 3258529 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.68 | 22.0 | 4.11e-01 | 99.7% | 100.0% |
| 3221888 | 10.32.1.218 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF7154 | 0.67 | 23.0 | 3.86e-01 | 99.4% | 85.4% |
| 3241410 | 10.32.1.218 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF7154 | 0.66 | 22.0 | 3.97e-01 | 99.2% | 94.5% |
| 5040077 | 10.1.2.184 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PepX_C | 0.65 | 32.0 | 4.55e-01 | 98.9% | 93.0% |
| 3805836 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.65 | 25.0 | 4.06e-01 | 97.2% | 91.9% |
| 5033447 | 10.1.2.184 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PepX_C | 0.64 | 34.0 | 4.48e-01 | 99.4% | 88.1% |
| 3962773 | 10.32.1.31 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C | 0.64 | 32.0 | 4.36e-01 | 98.9% | 87.5% |
| 4132938 | 10.32.1.31 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C | 0.63 | 33.0 | 4.49e-01 | 98.6% | 93.7% |
| 3472554 | 10.32.1.6 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › P_proprotein | 0.63 | 28.0 | 4.19e-01 | 100.0% | 92.1% |
| 5053199 | 10.1.2.184 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PepX_C | 0.62 | 34.0 | 4.39e-01 | 99.2% | 88.8% |
| 4493031 | 10.32.1.31 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C | 0.62 | 36.0 | 4.51e-01 | 99.2% | 90.7% |
| 3908007 | 10.3.1.1 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF | 0.62 | 27.0 | 4.05e-01 | 99.2% | 94.7% |
| 5033996 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.61 | 36.0 | 4.39e-01 | 99.2% | 86.1% |
| 5049237 | 10.1.2.184 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PepX_C | 0.61 | 36.0 | 4.53e-01 | 99.7% | 93.6% |
| 3057120 | 10.32.1.31 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C | 0.60 | 33.0 | 4.38e-01 | 99.2% | 94.9% |
| 4671992 | 10.32.1.31 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C | 0.60 | 35.0 | 4.47e-01 | 92.8% | 94.0% |
| 4242187 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.60 | 19.0 | 3.46e-01 | 98.1% | 87.0% |
| 1209147 | 10.32.1.31 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C | 0.60 | 31.0 | 4.16e-01 | 99.2% | 88.0% |
| 5058689 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.60 | 19.0 | 3.64e-01 | 94.8% | 100.0% |
| 4561987 | 10.32.1.31 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C | 0.59 | 35.0 | 4.41e-01 | 98.6% | 93.8% |
| 3401269 | 10.1.1.5 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Pentaxin | 0.58 | 27.0 | 3.29e-01 | 98.6% | 63.3% |
| 1273 | 10.10.1.1 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › PLAT | 0.57 | 18.0 | 3.18e-01 | 95.3% | 83.8% |
| 3953328 | 10.32.1.31 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C | 0.57 | 33.0 | 4.23e-01 | 92.8% | 94.4% |
| 3928295 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.56 | 27.0 | 3.63e-01 | 98.6% | 82.0% |
| 4307195 | 10.32.1.31 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C | 0.55 | 33.0 | 4.11e-01 | 98.6% | 92.9% |
| 3601923 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.54 | 23.0 | 3.11e-01 | 97.0% | 71.6% |
| 3557449 | 10.1.1.35 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 | 0.54 | 27.0 | 3.30e-01 | 98.6% | 70.4% |
| 3280361 | 10.32.1.31 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C | 0.54 | 34.0 | 4.16e-01 | 99.2% | 94.6% |
| 3396144 | 10.21.1.1 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in ADAMTS13 › Jelly-roll domain in ADAMTS13 › ADAMTS_spacer1 | 0.53 | 22.0 | 3.41e-01 | 96.1% | 92.4% |
| 3816929 | 10.32.1.38 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Malectin_like | 0.53 | 22.0 | 3.11e-01 | 93.4% | 77.1% |
| 4015800 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.52 | 22.0 | 3.47e-01 | 70.2% | 100.0% |
| 3913258 | 10.3.1.2 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q | 0.51 | 22.0 | 3.42e-01 | 97.2% | 98.6% |
| 3558696 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 17.0 | 3.09e-01 | 97.8% | 99.0% |
| 4930609 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.51 | 22.0 | 3.34e-01 | 94.2% | 97.1% |
| 3896267 | 10.32.1.69 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › LAMININ_IV_B | 0.51 | 26.0 | 3.25e-01 | 93.4% | 76.4% |
| 5029582 | 10.20.1.0 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease | 0.50 | 19.0 | 3.05e-01 | 96.7% | 88.1% |
| 3307805 | 10.32.1.8 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 | 0.50 | 24.0 | 3.42e-01 | 97.0% | 93.5% |
| 4944602 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.50 | 21.0 | 3.18e-01 | 98.9% | 89.3% |
| 3281330 | 10.32.1.31 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C | 0.50 | 34.0 | 4.04e-01 | 100.0% | 95.8% |