←Back to structures
LacPavin_0818_WC40_scaffold_238879_prodigal-single.1__X__X__00308
Bact-VirLacPavin_0818_WC40_scaffold_238879_prodigal-single.1__X__X__00308
Identity
- Kingdom:
- phage
Quality
93.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-169
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2vugA02 | 3.30.1490.70 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.56 | 25.0 | 3.57e-01 | 90.3% | 91.7% |
| 3glkA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.55 | 21.0 | 3.21e-01 | 89.7% | 89.8% |
| 1o75A04 | 2.60.40.1270 | Mainly Beta › Sandwich › Immunoglobulin-like › Penicillin-binding protein Tp47, domain D | 0.54 | 26.0 | 3.54e-01 | 83.6% | 90.2% |
| 1uctA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 22.0 | 2.91e-01 | 99.4% | 69.2% |
| 2fcbA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 24.0 | 3.20e-01 | 89.1% | 81.6% |
| 3cqbB01 | 3.30.2010.10 | Alpha Beta › 2-Layer Sandwich › Zincin-like › "Metalloproteases (""zincins""), catalytic domain" | 0.50 | 30.0 | 3.72e-01 | 75.2% | 100.0% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4221343 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 26.0 | 3.50e-01 | 84.2% | 89.3% |
| 4203665 | 4357.1.1.1 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE | 0.51 | 19.0 | 2.74e-01 | 92.7% | 72.0% |