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LacPavin_0818_WC40_scaffold_238879_prodigal-single.1__X__X__00421
Bact-VirLacPavin_0818_WC40_scaffold_238879_prodigal-single.1__X__X__00421
Identity
- Kingdom:
- phage
Quality
84.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-112
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1x6bA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.76 | 42.0 | 5.19e-01 | 100.0% | 87.5% |
| 2e6zA00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.74 | 37.0 | 4.65e-01 | 100.0% | 81.4% |
| 4f88102 | 3.90.1720.60 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › | 0.70 | 42.0 | 3.24e-01 | 100.0% | 28.6% |
| 3fb9B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 39.0 | 4.30e-01 | 100.0% | 67.9% |
| 3oyyA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 34.0 | 4.02e-01 | 99.0% | 83.3% |
| 2lmcB00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.59 | 31.0 | 3.73e-01 | 90.2% | 80.3% |
| 1uebA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 32.0 | 3.88e-01 | 99.0% | 88.9% |
| 3ulbA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 40.0 | 4.31e-01 | 82.4% | 97.6% |
| 2m38A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 44.0 | 4.06e-01 | 95.1% | 90.4% |
| 2qkdA03 | 2.20.25.420 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain | 0.52 | 27.0 | 3.41e-01 | 88.2% | 94.1% |
| 2rrfA00 | 2.30.29.160 | Mainly Beta › Roll › PH-domain like › Zinc finger FYVE domain-containing protein 21, C-terminal | 0.51 | 43.0 | 3.92e-01 | 94.1% | 80.1% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3225816 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.78 | 48.0 | 5.78e-01 | 100.0% | 91.4% |
| 5039349 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.77 | 45.0 | 5.70e-01 | 99.0% | 98.3% |
| 3233461 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.77 | 43.0 | 5.49e-01 | 100.0% | 95.0% |
| 3616622 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 42.0 | 5.25e-01 | 100.0% | 92.1% |
| 3634475 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 46.0 | 5.42e-01 | 100.0% | 92.9% |
| 3576443 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.73 | 45.0 | 5.36e-01 | 100.0% | 91.4% |
| 3294025 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.72 | 39.0 | 5.19e-01 | 94.1% | 100.0% |
| 3693741 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 44.0 | 5.22e-01 | 100.0% | 92.8% |
| 4655719 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.69 | 42.0 | 4.52e-01 | 100.0% | 70.0% |
| 1545879 | 4.1.1.120 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_16 | 0.65 | 59.0 | 5.99e-01 | 99.0% | 100.0% |
| 3507003 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 41.0 | 4.64e-01 | 100.0% | 86.7% |
| 3596265 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 42.0 | 4.32e-01 | 100.0% | 69.0% |
| 3808601 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 44.0 | 4.79e-01 | 100.0% | 85.9% |
| 3504086 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 46.0 | 4.91e-01 | 100.0% | 86.7% |
| 4398865 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.61 | 46.0 | 4.75e-01 | 100.0% | 84.2% |
| 3934655 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 46.0 | 5.03e-01 | 100.0% | 98.8% |
| 3489469 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 46.0 | 4.59e-01 | 100.0% | 80.0% |
| 3399407 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 48.0 | 4.86e-01 | 100.0% | 88.0% |
| 3994911 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 45.0 | 4.53e-01 | 100.0% | 85.7% |
| 3216165 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.54 | 46.0 | 4.57e-01 | 94.1% | 96.2% |
| 3173368 | 220.1.1.244 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PF31261 | 0.54 | 46.0 | 4.16e-01 | 95.1% | 74.3% |
| 3821886 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.52 | 28.0 | 3.17e-01 | 99.0% | 69.3% |
| 4980908 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.52 | 42.0 | 3.70e-01 | 89.2% | 94.8% |
| 3579987 | 220.1.1.160 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_MADD | 0.51 | 43.0 | 4.22e-01 | 95.1% | 95.5% |
| 3815659 | 223.2.1.1 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin | 0.50 | 35.0 | 3.11e-01 | 71.6% | 76.4% |