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LacPavin_0818_WC40_scaffold_26136_prodigal-single.1__X__X__00024

Bact-Vir

LacPavin_0818_WC40_scaffold_26136_prodigal-single.1__X__X__00024

Identity

Kingdom:
phage

Quality

94.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 3-64
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ofcX04 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.73 57.0 4.96e-01 83.9% 59.6%
1x2mA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.70 38.0 4.05e-01 71.0% 61.1%
1k82A02 1.10.8.50 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.64 47.0 3.74e-01 77.4% 64.2%
3juwA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.60 41.0 3.05e-01 72.6% 63.5%
3ljxA01 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.53 38.0 2.58e-01 75.8% 45.1%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4860588 7108.1.1.0 alpha complex topology › Stl repressor, middle domain › Stl repressor, middle domain › Stl repressor, middle domain 0.56 37.0 3.74e-01 71.0% 100.0%