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LacPavin_0818_WC40_scaffold_26136_prodigal-single.1__X__X__00032
Bact-VirLacPavin_0818_WC40_scaffold_26136_prodigal-single.1__X__X__00032
Identity
- Kingdom:
- phage
Quality
95.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-56
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3fbzA01 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 48.0 | 3.95e-01 | 100.0% | 52.9% |
| 2l1lB00 | 1.20.1440.250 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.52 | 39.0 | 3.12e-01 | 88.5% | 43.3% |
| 3bjdA01 | 1.10.1240.20 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Lytic transglycosylase, superhelical linker domain | 0.51 | 38.0 | 3.37e-01 | 88.5% | 81.8% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4535558 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.57 | 50.0 | 4.26e-01 | 98.1% | 84.7% |
| 4331283 | 152.1.2.1 ↗ | alpha arrays › RPB6/omega subunit-like › RPB6/omega subunit-like › RNA polymerase omega subunit › RNA_pol_Rpb6 | 0.50 | 35.0 | 3.45e-01 | 76.9% | 86.7% |