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LacPavin_0818_WC40_scaffold_26136_prodigal-single.1__X__X__00069
Bact-VirLacPavin_0818_WC40_scaffold_26136_prodigal-single.1__X__X__00069
Identity
- Kingdom:
- phage
Quality
82.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 71-282
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2vobB02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.64 | 48.0 | 4.81e-01 | 75.9% | 77.6% |
| 4g54A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.62 | 34.0 | 4.34e-01 | 93.9% | 89.6% |
| 3b79A00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.62 | 36.0 | 4.58e-01 | 90.6% | 96.0% |
| 6oqrA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.61 | 20.0 | 3.14e-01 | 92.5% | 70.0% |
| 3m1uA01 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.60 | 43.0 | 4.82e-01 | 76.9% | 90.6% |
| 4f88102 | 3.90.1720.60 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › | 0.59 | 46.0 | 4.66e-01 | 86.3% | 80.3% |
| 2k57A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 16.0 | 3.20e-01 | 75.9% | 96.4% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4015238 | 219.1.1.28 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP | 0.75 | 45.0 | 5.78e-01 | 74.1% | 100.0% |
| 3972956 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.63 | 38.0 | 4.58e-01 | 76.9% | 88.3% |
| 3947337 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.62 | 38.0 | 4.42e-01 | 76.4% | 82.6% |
| 3987478 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.62 | 38.0 | 4.74e-01 | 75.9% | 97.7% |
| 3385474 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.61 | 44.0 | 4.84e-01 | 79.7% | 89.0% |
| 3838874 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.61 | 46.0 | 4.97e-01 | 80.2% | 90.0% |
| 3975571 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.60 | 42.0 | 4.47e-01 | 78.3% | 80.0% |
| 4046385 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.59 | 37.0 | 4.43e-01 | 75.0% | 92.9% |
| 3970579 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.58 | 38.0 | 4.47e-01 | 74.1% | 93.3% |
| 3948255 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 22.0 | 2.85e-01 | 77.4% | 56.9% |