←Back to structures
LacPavin_0818_WC40_scaffold_26136_prodigal-single.1__X__X__00109
Bact-VirLacPavin_0818_WC40_scaffold_26136_prodigal-single.1__X__X__00109
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 65-204
Domain cluster:
rep: BML_08182015_6_5m_scaffold_1_prodigal-single.1__X__X__00311__D64-88_111-185
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ub9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 33.0 | 3.89e-01 | 97.1% | 68.0% |
| 3cueC00 | 3.30.450.70 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.62 | 37.0 | 3.69e-01 | 87.1% | 55.9% |
| 4hqeA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 32.0 | 3.70e-01 | 97.9% | 66.7% |
| 5x6vG00 | 3.30.450.190 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.62 | 40.0 | 4.15e-01 | 88.6% | 68.9% |
| 1y4oA00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.62 | 36.0 | 4.06e-01 | 87.1% | 76.0% |
| 5e1wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 32.0 | 3.04e-01 | 97.9% | 41.1% |
| 4p6zM01 | 3.30.450.60 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.60 | 33.0 | 3.55e-01 | 86.4% | 59.5% |
| 3o6qA02 | 3.30.70.2720 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 32.0 | 3.57e-01 | 89.3% | 63.2% |
| 3r7wC02 | 3.30.450.190 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.60 | 34.0 | 3.80e-01 | 87.9% | 70.1% |
| 2grgA01 | 3.40.1840.10 | Alpha Beta › 3-Layer(aba) Sandwich › Profilin-like › YNR034W-A-like | 0.59 | 33.0 | 4.05e-01 | 87.9% | 90.4% |
| 3omzA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 32.0 | 3.64e-01 | 94.3% | 72.5% |
| 2fbhA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 32.0 | 3.31e-01 | 97.9% | 56.2% |
| 6pcoC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 30.0 | 3.13e-01 | 97.9% | 55.3% |
| 1nrkA01 | 3.30.70.1630 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 27.0 | 3.18e-01 | 94.3% | 66.0% |
| 3jamK00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 28.0 | 3.24e-01 | 92.9% | 68.8% |
| 2cdqA03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.54 | 25.0 | 3.05e-01 | 92.1% | 66.7% |
| 2hf6A00 | 3.30.450.60 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.53 | 31.0 | 3.05e-01 | 87.9% | 51.0% |
| 3nhqA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.53 | 34.0 | 3.67e-01 | 88.6% | 75.6% |
| 3c6kA01 | 3.30.160.110 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Sirohaem synthase, central domain | 0.52 | 29.0 | 3.37e-01 | 92.1% | 76.6% |
| 2j0wA03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.52 | 25.0 | 3.06e-01 | 94.3% | 71.6% |
| 3ezjA02 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.52 | 26.0 | 3.64e-01 | 100.0% | 100.0% |
| 4ctaA02 | 3.30.70.2860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 24.0 | 3.02e-01 | 91.4% | 73.3% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3512217 | 223.2.1.53 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › DUF7278 | 0.70 | 37.0 | 4.98e-01 | 82.9% | 100.0% |
| 4944328 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.65 | 39.0 | 4.10e-01 | 87.1% | 63.8% |
| 3599007 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.63 | 38.0 | 4.40e-01 | 87.9% | 84.0% |
| 5053372 | 101.1.2.26 ↗ | alpha arrays › HTH › HTH › winged helix domain › HxlR | 0.62 | 34.0 | 3.42e-01 | 97.9% | 52.1% |
| 5076693 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.62 | 33.0 | 3.58e-01 | 87.9% | 57.5% |
| 3397015 | 223.2.1.33 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_3 | 0.62 | 43.0 | 4.38e-01 | 89.3% | 70.7% |
| 4000746 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.62 | 36.0 | 4.39e-01 | 87.1% | 89.9% |
| 3996654 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.61 | 41.0 | 4.51e-01 | 88.6% | 85.5% |
| 5047389 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.61 | 36.0 | 3.76e-01 | 86.4% | 60.8% |
| 3281724 | 101.1.2.26 ↗ | alpha arrays › HTH › HTH › winged helix domain › HxlR | 0.61 | 34.0 | 3.61e-01 | 97.9% | 60.0% |
| 4261091 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.61 | 40.0 | 4.13e-01 | 87.9% | 70.5% |
| 4028315 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.60 | 37.0 | 4.08e-01 | 87.1% | 76.4% |
| 5044674 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.60 | 37.0 | 3.82e-01 | 87.1% | 63.8% |
| 4945126 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.60 | 37.0 | 3.83e-01 | 87.1% | 65.4% |
| 3706420 | 223.2.1.20 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_1 | 0.59 | 36.0 | 3.48e-01 | 87.1% | 51.9% |
| 5044631 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.59 | 35.0 | 3.65e-01 | 86.4% | 61.5% |
| 3401904 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.59 | 35.0 | 3.89e-01 | 87.9% | 73.6% |
| 4963528 | 223.2.1.63 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › DUF7522 | 0.59 | 40.0 | 4.06e-01 | 87.9% | 70.4% |
| 4945628 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.58 | 36.0 | 3.66e-01 | 87.9% | 60.7% |
| 4649222 | 101.1.2.15 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR | 0.58 | 32.0 | 3.37e-01 | 97.9% | 57.7% |
| 5052141 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.58 | 37.0 | 3.64e-01 | 87.9% | 58.7% |
| 4218542 | 327.16.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system | 0.57 | 21.0 | 3.03e-01 | 86.4% | 71.7% |
| 5053655 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.57 | 36.0 | 3.70e-01 | 89.3% | 64.4% |
| 4943575 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.56 | 33.0 | 3.37e-01 | 88.6% | 56.4% |
| 2817021 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.56 | 41.0 | 4.29e-01 | 98.6% | 83.6% |
| 5028564 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.56 | 31.0 | 3.43e-01 | 87.1% | 66.1% |
| 5077444 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.56 | 34.0 | 3.45e-01 | 87.1% | 60.0% |
| 3628286 | 223.2.1.33 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_3 | 0.56 | 34.0 | 3.54e-01 | 87.9% | 63.1% |
| 5053041 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.56 | 35.0 | 3.59e-01 | 88.6% | 63.7% |
| 4943270 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.55 | 33.0 | 3.65e-01 | 86.4% | 72.7% |
| 4944816 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.55 | 34.0 | 3.55e-01 | 87.1% | 64.6% |
| 3183393 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.55 | 34.0 | 3.92e-01 | 87.1% | 89.5% |
| 4964955 | 223.2.1.63 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › DUF7522 | 0.55 | 34.0 | 3.53e-01 | 87.9% | 65.1% |
| 3623755 | 223.2.1.16 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › LAMTOR5 | 0.54 | 32.0 | 3.42e-01 | 87.9% | 67.8% |
| 4362511 | 223.2.1.20 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_1 | 0.54 | 40.0 | 3.75e-01 | 85.0% | 63.9% |
| 3715965 | 223.2.1.8 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Sybindin | 0.53 | 36.0 | 3.53e-01 | 86.4% | 62.7% |
| 4018116 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.53 | 32.0 | 3.46e-01 | 86.4% | 68.6% |
| 3600795 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.53 | 35.0 | 3.55e-01 | 87.1% | 64.8% |
| 3787551 | 223.2.1.17 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › SLM4 | 0.53 | 37.0 | 3.53e-01 | 86.4% | 61.2% |
| 5051060 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.52 | 34.0 | 3.40e-01 | 87.1% | 61.5% |
| 4979703 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.52 | 45.0 | 4.44e-01 | 92.1% | 99.3% |
| 3964191 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.51 | 34.0 | 3.72e-01 | 95.0% | 82.6% |
| 3509818 | 11.1.5.37 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › muHD | 0.51 | 32.0 | 3.39e-01 | 89.3% | 68.5% |
| 3981377 | 327.16.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system | 0.50 | 21.0 | 2.89e-01 | 88.6% | 76.9% |