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LacPavin_0818_WC40_scaffold_26136_prodigal-single.1__X__X__00388
Bact-VirLacPavin_0818_WC40_scaffold_26136_prodigal-single.1__X__X__00388
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 23-121
Domain cluster:
rep: NC_020865.1__YP_007676328.1__CYZG_00006__00006__D1052-1126
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1z5hA01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.73 | 43.0 | 3.61e-01 | 90.9% | 34.1% |
| 5zi7A01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.66 | 46.0 | 3.73e-01 | 92.9% | 38.4% |
| 4kc3B01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 43.0 | 4.51e-01 | 89.9% | 77.3% |
| 6ibkA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.62 | 44.0 | 4.53e-01 | 92.9% | 76.3% |
| 3d3aA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.62 | 41.0 | 3.76e-01 | 94.9% | 50.0% |
| 1rgxA02 | 2.60.40.4230 | Mainly Beta › Sandwich › Immunoglobulin-like › Resistin head domain | 0.61 | 35.0 | 4.13e-01 | 90.9% | 85.9% |
| 4kc3B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 43.0 | 4.44e-01 | 92.9% | 77.9% |
| 2osxA01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.61 | 40.0 | 4.06e-01 | 91.9% | 67.7% |
| 5ikuA01 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 41.0 | 4.12e-01 | 93.9% | 69.2% |
| 1o7dC02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.59 | 42.0 | 4.37e-01 | 91.9% | 82.0% |
| 1cczA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 45.0 | 4.63e-01 | 87.9% | 87.1% |
| 1cgtA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.59 | 39.0 | 4.03e-01 | 91.9% | 71.3% |
| 2xvlA02 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 39.0 | 3.48e-01 | 93.9% | 47.6% |
| 4a0tA03 | 2.60.320.30 | Mainly Beta › Sandwich › mini-chromosome maintenance (MCM) complex, domain 2 › | 0.57 | 44.0 | 4.56e-01 | 91.9% | 92.2% |
| 4devD01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.56 | 42.0 | 3.94e-01 | 93.9% | 64.0% |
| 2vrqA01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.56 | 44.0 | 4.01e-01 | 91.9% | 63.6% |
| 6qdiA02 | 3.90.182.10 | Alpha Beta › Alpha-Beta Complex › Toxin - Anthrax Protective Antigen; domain 1 › Toxin - Anthrax Protective Antigen;domain 1 | 0.55 | 38.0 | 3.42e-01 | 94.9% | 50.4% |
| 6qe7A01 | 3.90.182.10 | Alpha Beta › Alpha-Beta Complex › Toxin - Anthrax Protective Antigen; domain 1 › Toxin - Anthrax Protective Antigen;domain 1 | 0.55 | 37.0 | 3.38e-01 | 94.9% | 50.7% |
| 4ei0A01 | 2.60.40.3550 | Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4466 | 0.54 | 42.0 | 3.83e-01 | 93.9% | 59.6% |
| 3zm8A01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 40.0 | 3.73e-01 | 91.9% | 63.0% |
| 4kh9A03 | 2.60.120.1370 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 43.0 | 4.17e-01 | 93.9% | 77.9% |
| 7pjjA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 40.0 | 3.69e-01 | 93.9% | 62.0% |
| 4kbxA01 | 2.40.37.30 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › | 0.53 | 37.0 | 2.90e-01 | 73.7% | 87.3% |
| 1i5pA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 42.0 | 3.59e-01 | 93.9% | 53.8% |
| 7nitA06 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 42.0 | 3.59e-01 | 92.9% | 51.7% |
| 1zvfB01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 41.0 | 3.54e-01 | 94.9% | 51.8% |
| 3a21A03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 44.0 | 4.42e-01 | 93.9% | 98.0% |
| 1p8jA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 42.0 | 3.88e-01 | 91.9% | 93.9% |
| 2wnwA01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.51 | 30.0 | 2.98e-01 | 82.8% | 52.8% |
| 4aw7A03 | 2.60.120.1200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 41.0 | 3.91e-01 | 91.9% | 73.0% |
| 2qjvA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 42.0 | 4.06e-01 | 98.0% | 79.6% |
| 7ehgC01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 39.0 | 3.67e-01 | 94.9% | 65.9% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5035337 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.73 | 41.0 | 4.83e-01 | 89.9% | 80.9% |
| 4937135 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.72 | 48.0 | 3.98e-01 | 91.9% | 40.0% |
| 4955177 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.68 | 49.0 | 4.88e-01 | 91.9% | 71.4% |
| 3580256 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.67 | 47.0 | 4.86e-01 | 90.9% | 76.8% |
| 4021361 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.66 | 41.0 | 4.36e-01 | 91.9% | 69.7% |
| 5076974 | 12.1.1.34 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro38C2 | 0.64 | 43.0 | 4.51e-01 | 92.9% | 75.6% |
| 5044775 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.63 | 43.0 | 4.25e-01 | 93.9% | 66.7% |
| 4983619 | 7072.1.1.0 ↗ | beta sandwiches › N-terminal half of TgpA periplasmic domain › N-terminal half of TgpA periplasmic domain › N-terminal half of TgpA periplasmic domain | 0.61 | 40.0 | 3.56e-01 | 93.9% | 44.7% |
| 3969203 | 4182.1.1.0 ↗ | beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like | 0.59 | 45.0 | 4.33e-01 | 91.9% | 70.4% |
| 5083665 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.59 | 40.0 | 4.14e-01 | 91.9% | 73.7% |
| 5059104 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 46.0 | 4.60e-01 | 92.9% | 81.9% |
| 3511872 | 12.1.1.3 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Alpha-amylase_C | 0.58 | 40.0 | 4.23e-01 | 92.9% | 80.0% |
| 3411013 | 12.5.1.1 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5 | 0.58 | 49.0 | 4.30e-01 | 93.9% | 63.3% |
| 5056494 | 12.5.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related | 0.57 | 43.0 | 4.10e-01 | 98.0% | 66.7% |
| 4026174 | 5095.1.1.1 ↗ | beta sandwiches › N-terminal beta-sandwich domain in anthrax protective antigen › N-terminal beta-sandwich domain in anthrax protective antigen › N-terminal beta-sandwich domain in anthrax protective antigen › PA14 | 0.57 | 41.0 | 3.76e-01 | 93.9% | 57.7% |
| 4970170 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 42.0 | 4.35e-01 | 92.9% | 85.6% |
| 5035134 | 12.1.1.114 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › DUF2341 | 0.57 | 46.0 | 4.35e-01 | 97.0% | 73.3% |
| 3191942 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.55 | 42.0 | 4.14e-01 | 90.9% | 77.1% |
| 3415303 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.54 | 39.0 | 3.85e-01 | 91.9% | 70.5% |
| 3772640 | 10.21.1.1 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in ADAMTS13 › Jelly-roll domain in ADAMTS13 › ADAMTS_spacer1 | 0.54 | 42.0 | 3.90e-01 | 93.9% | 65.6% |
| 3547860 | 10.21.1.1 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in ADAMTS13 › Jelly-roll domain in ADAMTS13 › ADAMTS_spacer1 | 0.53 | 42.0 | 3.88e-01 | 93.9% | 65.4% |
| 2549615 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.53 | 43.0 | 4.34e-01 | 91.9% | 88.0% |
| 5038824 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.53 | 39.0 | 4.20e-01 | 92.9% | 92.9% |
| 3332154 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 45.0 | 3.76e-01 | 92.9% | 60.0% |
| 4941717 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 43.0 | 4.26e-01 | 92.9% | 83.8% |
| 3597628 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 43.0 | 4.15e-01 | 89.9% | 80.9% |
| 2512673 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 44.0 | 4.13e-01 | 93.9% | 78.6% |
| 3511291 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.52 | 42.0 | 4.14e-01 | 92.9% | 83.8% |
| 3258529 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.51 | 38.0 | 3.88e-01 | 90.9% | 80.0% |
| 5042048 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.51 | 42.0 | 3.43e-01 | 93.9% | 83.3% |
| 3648952 | 1.1.7.21 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RIBIOP_C | 0.51 | 40.0 | 3.94e-01 | 87.9% | 81.0% |