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LacPavin_0818_WC40_scaffold_269347_prodigal-single.1__X__X__00163
Bact-VirLacPavin_0818_WC40_scaffold_269347_prodigal-single.1__X__X__00163
Identity
- Kingdom:
- phage
Quality
85.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 40-152
Domain cluster:
rep: OR545507.1__WNN14754.1__Sharanji_gp473__00466__D2-61_73-125
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1gkaB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.59 | 41.0 | 3.57e-01 | 71.7% | 83.9% |
| 3d2lA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.50 | 26.0 | 3.24e-01 | 80.5% | 85.7% |
| 2n6eA00 | 3.40.1530.20 | Alpha Beta › 3-Layer(aba) Sandwich › hypothetical protein tt1805 › Protein of unknown function (DUF1491) | 0.50 | 36.0 | 3.66e-01 | 80.5% | 76.4% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 840 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.58 | 41.0 | 3.56e-01 | 74.3% | 81.8% |
| 3232594 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.52 | 43.0 | 3.49e-01 | 90.3% | 83.6% |
| 3330108 | 9.1.1.10 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › VDE | 0.52 | 42.0 | 3.66e-01 | 90.3% | 82.2% |
| 3791851 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.50 | 39.0 | 3.63e-01 | 83.2% | 92.4% |