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LacPavin_0818_WC40_scaffold_269347_prodigal-single.1__X__X__00182
Bact-VirLacPavin_0818_WC40_scaffold_269347_prodigal-single.1__X__X__00182
Identity
- Kingdom:
- phage
Quality
64.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 9-61
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2yugA00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.57 | 46.0 | 3.47e-01 | 100.0% | 81.3% |
| 2fdbN00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.55 | 44.0 | 3.42e-01 | 100.0% | 85.8% |
| 1jlxA02 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.54 | 44.0 | 3.42e-01 | 100.0% | 98.6% |
| 3ol0B00 | 6.20.90.30 | Special › Other non-globular › SH3 type barrels. › | 0.52 | 29.0 | 3.20e-01 | 100.0% | 53.7% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3315643 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.55 | 42.0 | 3.61e-01 | 86.8% | 71.1% |
| 4027811 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.53 | 43.0 | 3.71e-01 | 98.1% | 82.1% |
| 3578695 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.53 | 40.0 | 3.54e-01 | 90.6% | 77.8% |
| 4775977 | 6.1.1.1 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › FGF | 0.52 | 29.0 | 3.11e-01 | 100.0% | 53.5% |
| 3437155 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.50 | 38.0 | 3.41e-01 | 96.2% | 81.1% |
| 4434610 | 6.1.1.4 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › Ricin_B_lectin | 0.50 | 39.0 | 3.21e-01 | 98.1% | 91.2% |
| 3241908 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.50 | 38.0 | 3.27e-01 | 84.9% | 62.2% |
| 4965613 | 243.6.1.15 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › DUF7122 | 0.50 | 38.0 | 3.38e-01 | 90.6% | 91.1% |