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LacPavin_0818_WC40_scaffold_269347_prodigal-single.1__X__X__00233

Bact-Vir

LacPavin_0818_WC40_scaffold_269347_prodigal-single.1__X__X__00233

Identity

Kingdom:
phage

Quality

85.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 21-164
PDB
CATH (34)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2w4eA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.79 67.0 6.90e-01 97.9% 94.2%
4nfwF00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.79 67.0 6.62e-01 96.5% 85.0%
1mk1A00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.78 67.0 6.12e-01 98.6% 70.6%
1vhzA01 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.77 69.0 6.40e-01 98.6% 77.0%
4dywA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.77 64.0 6.70e-01 93.8% 96.9%
1x51A01 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.77 67.0 6.79e-01 97.9% 93.7%
2azwA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.77 65.0 6.52e-01 97.9% 88.4%
3q91B00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.76 65.0 6.81e-01 98.6% 98.5%
3gz8C01 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.76 68.0 6.99e-01 97.2% 100.0%
5c7qB00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.76 69.0 6.34e-01 98.6% 77.2%
2fmlA02 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.76 69.0 6.59e-01 97.2% 97.6%
2b0vA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.76 66.0 6.57e-01 96.5% 90.5%
5deqA01 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.75 63.0 6.48e-01 94.4% 92.1%
3sonA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.75 68.0 6.86e-01 98.6% 95.9%
2fkbC00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.75 64.0 6.09e-01 95.8% 78.4%
3hhjB00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.75 63.0 6.58e-01 96.5% 98.5%
1ktgA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.75 65.0 6.72e-01 97.9% 98.5%
5cfjA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.74 66.0 6.73e-01 97.9% 97.9%
4hfqA02 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.74 63.0 6.43e-01 97.9% 94.2%
4ktbA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.74 66.0 6.42e-01 96.5% 93.8%
3qsjA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.74 67.0 5.76e-01 97.9% 95.5%
3gg6A00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.74 64.0 6.46e-01 100.0% 93.1%
4kyxA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.74 64.0 6.56e-01 95.8% 96.4%
6uufA01 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.73 64.0 6.36e-01 94.4% 90.8%
4k6eA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.73 64.0 6.49e-01 98.6% 95.1%
3edsA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.73 56.0 5.79e-01 93.8% 85.7%
3i9xA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.71 66.0 6.43e-01 99.3% 96.2%
4mpoB00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.71 64.0 6.42e-01 99.3% 95.3%
3bm4A00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.71 65.0 5.79e-01 98.6% 75.6%
5anvA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.69 62.0 6.10e-01 97.2% 95.4%
3fk9A00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.68 63.0 6.17e-01 99.3% 98.0%
2jxtA01 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.57 27.0 3.57e-01 75.0% 84.2%
2hj1A00 3.10.20.280 Alpha Beta › Roll › Ubiquitin-like (UB roll) › RnfH-like 0.56 29.0 3.74e-01 94.4% 89.6%
1kblA06 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.55 30.0 3.57e-01 97.9% 76.5%
ECOD (88)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3357370 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.80 74.0 6.02e-01 98.6% 62.0%
4980017 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.80 70.0 6.49e-01 95.8% 76.0%
3886741 221.4.1.9 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX_4 0.79 73.0 7.22e-01 100.0% 93.3%
3839072 221.4.1.0 a+b two layers › beta-Grasp › Nudix › Nudix 0.79 72.0 6.25e-01 96.5% 75.2%
3494310 221.4.1.0 a+b two layers › beta-Grasp › Nudix › Nudix 0.79 73.0 6.67e-01 98.6% 88.0%
4928536 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.79 67.0 6.32e-01 92.4% 75.9%
3580121 221.4.1.0 a+b two layers › beta-Grasp › Nudix › Nudix 0.79 71.0 6.26e-01 96.5% 82.9%
5001100 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.79 69.0 6.52e-01 96.5% 78.8%
4963204 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.78 68.0 6.21e-01 95.8% 71.4%
135447 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.78 67.0 6.60e-01 96.5% 85.0%
3908864 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.78 72.0 6.48e-01 98.6% 80.4%
3216248 221.4.1.0 a+b two layers › beta-Grasp › Nudix › Nudix 0.78 73.0 5.11e-01 100.0% 44.4%
4963253 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.78 70.0 6.48e-01 96.5% 77.5%
3282139 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.77 71.0 6.25e-01 98.6% 68.8%
5074099 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.77 67.0 6.71e-01 99.3% 91.0%
3286004 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.77 68.0 6.78e-01 95.8% 90.0%
3539647 221.4.1.9 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX_4 0.77 69.0 6.82e-01 100.0% 91.3%
1562368 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.77 68.0 6.69e-01 98.6% 88.8%
5029748 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.77 66.0 6.87e-01 95.1% 97.8%
None 0.77 71.0 6.62e-01 98.6% 81.6%
4937578 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.77 66.0 6.86e-01 95.8% 97.8%
365187 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.76 67.0 6.61e-01 96.5% 87.7%
4879628 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.76 70.0 6.14e-01 97.9% 72.4%
5041586 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.76 67.0 6.86e-01 97.9% 97.1%
3589504 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.76 69.0 6.34e-01 98.6% 77.2%
3517277 221.4.1.0 a+b two layers › beta-Grasp › Nudix › Nudix 0.76 59.0 6.03e-01 80.6% 92.0%
3280317 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.76 65.0 6.55e-01 96.5% 91.0%
6244 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.76 66.0 6.60e-01 96.5% 91.8%
4934087 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.75 69.0 6.39e-01 98.6% 90.6%
3739109 221.4.1.9 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX_4 0.75 66.0 6.64e-01 95.1% 92.4%
5017151 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.75 61.0 5.89e-01 93.1% 76.2%
4944491 221.4.1.0 a+b two layers › beta-Grasp › Nudix › Nudix 0.75 65.0 6.65e-01 96.5% 95.0%
6256 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.75 70.0 6.16e-01 100.0% 81.2%
3591881 221.4.1.9 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX_4 0.75 70.0 6.43e-01 100.0% 93.9%
3261242 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.74 66.0 5.93e-01 93.8% 75.3%
5057824 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.74 64.0 6.24e-01 97.2% 84.5%
3972429 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.74 67.0 6.66e-01 98.6% 92.7%
5058482 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.74 65.0 6.63e-01 98.6% 97.1%
5041797 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.74 61.0 6.36e-01 96.5% 94.0%
4025046 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.74 67.0 6.12e-01 98.6% 75.8%
3955933 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.74 66.0 5.59e-01 96.5% 72.8%
5060978 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.74 63.0 6.41e-01 97.9% 92.9%
5057737 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.74 61.0 6.37e-01 93.8% 96.9%
1018902 221.4.1.11 a+b two layers › beta-Grasp › Nudix › Nudix › DUF4916 0.74 66.0 6.42e-01 96.5% 93.8%
4963179 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.74 58.0 6.27e-01 87.5% 98.3%
4974972 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.74 67.0 6.68e-01 99.3% 94.0%
3741586 221.4.1.24 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX, DUF4743 0.73 67.0 5.30e-01 99.3% 52.4%
3944800 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.73 61.0 6.39e-01 94.4% 96.9%
5041458 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.73 67.0 5.97e-01 99.3% 82.8%
3951244 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.73 68.0 6.62e-01 99.3% 92.3%
3592497 221.4.1.0 a+b two layers › beta-Grasp › Nudix › Nudix 0.73 62.0 6.50e-01 92.4% 98.5%
3513108 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.73 57.0 6.00e-01 81.2% 90.0%
5044164 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.73 67.0 6.29e-01 100.0% 82.9%
5001210 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.73 65.0 6.47e-01 98.6% 92.0%
2987839 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.73 63.0 6.40e-01 96.5% 95.0%
4934398 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.73 62.0 6.41e-01 96.5% 97.0%
3712148 221.4.1.0 a+b two layers › beta-Grasp › Nudix › Nudix 0.72 66.0 6.45e-01 97.9% 99.4%
4026963 221.4.1.0 a+b two layers › beta-Grasp › Nudix › Nudix 0.72 65.0 6.58e-01 100.0% 98.6%
162532 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.72 65.0 5.72e-01 96.5% 72.3%
3937186 221.4.1.21 a+b two layers › beta-Grasp › Nudix › Nudix › PF30669 0.72 66.0 5.13e-01 97.9% 73.9%
5058019 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.72 64.0 6.41e-01 97.9% 95.1%
3292450 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.72 66.0 6.09e-01 100.0% 84.3%
4929722 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.72 64.0 5.91e-01 96.5% 85.4%
5038817 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.72 64.0 6.38e-01 96.5% 97.3%
5030096 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.72 64.0 6.15e-01 99.3% 84.0%
3389792 221.4.1.21 a+b two layers › beta-Grasp › Nudix › Nudix › PF30669 0.72 66.0 5.22e-01 99.3% 97.9%
3514959 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.72 66.0 5.90e-01 99.3% 86.2%
3692759 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.71 65.0 5.08e-01 99.3% 66.3%
4962638 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.71 65.0 6.36e-01 97.9% 91.0%
3882130 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.71 65.0 5.63e-01 100.0% 79.0%
4960496 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.71 65.0 6.40e-01 96.5% 92.7%
3915219 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.71 63.0 6.12e-01 96.5% 85.6%
3780755 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.71 65.0 5.64e-01 100.0% 81.4%
3989003 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.71 63.0 6.14e-01 95.8% 88.7%
3484055 221.4.1.0 a+b two layers › beta-Grasp › Nudix › Nudix 0.71 64.0 5.46e-01 97.2% 89.3%
3738254 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.70 63.0 5.74e-01 97.2% 83.4%
5051216 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.70 61.0 6.00e-01 94.4% 86.5%
3812745 221.4.1.28 a+b two layers › beta-Grasp › Nudix › Nudix › DUF7915 0.70 65.0 6.26e-01 98.6% 96.2%
5065093 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.69 62.0 5.72e-01 96.5% 87.6%
3179348 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.69 64.0 5.68e-01 100.0% 75.9%
4011733 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.68 62.0 6.10e-01 98.6% 97.4%
3503169 221.4.1.18 a+b two layers › beta-Grasp › Nudix › Nudix › NUDT9_N 0.66 52.0 4.38e-01 81.9% 57.8%
3677800 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.66 53.0 5.26e-01 86.1% 94.2%
3719464 221.4.1.0 a+b two layers › beta-Grasp › Nudix › Nudix 0.62 49.0 5.20e-01 89.6% 95.2%
3934642 221.4.1.0 a+b two layers › beta-Grasp › Nudix › Nudix 0.62 53.0 5.18e-01 98.6% 83.7%
3461199 221.4.1.9 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX_4 0.60 53.0 5.02e-01 91.7% 85.5%
3925978 221.4.1.0 a+b two layers › beta-Grasp › Nudix › Nudix 0.59 54.0 5.15e-01 98.6% 98.8%
3924518 221.4.1.0 a+b two layers › beta-Grasp › Nudix › Nudix 0.57 41.0 4.61e-01 75.0% 99.1%