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LacPavin_0818_WC40_scaffold_269347_prodigal-single.1__X__X__00325
Bact-VirLacPavin_0818_WC40_scaffold_269347_prodigal-single.1__X__X__00325
Identity
- Kingdom:
- phage
Quality
72.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 25-136
Domain cluster:
rep: LacPavin_0818_WC40_scaffold_269347_prodigal-single.1__X__X__00289__D25-121
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3bk2A03 | 3.10.20.580 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.62 | 39.0 | 4.10e-01 | 90.2% | 69.7% |
| 2e50B02 | 3.30.1120.90 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Nucleosome assembly protein | 0.51 | 42.0 | 4.28e-01 | 93.8% | 100.0% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3773744 | 883.1.1.1 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP | 0.60 | 46.0 | 4.12e-01 | 83.0% | 86.7% |
| 3842458 | 883.1.1.1 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP | 0.57 | 45.0 | 3.99e-01 | 85.7% | 81.2% |
| 3936335 | 244.3.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › CO_deh_flav_C | 0.52 | 40.0 | 4.11e-01 | 83.0% | 98.2% |
| 4021118 | 3896.1.1.2 ↗ | alpha duplicates or obligate multimers › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-DAG synthetase › DUF92 | 0.52 | 47.0 | 3.48e-01 | 100.0% | 93.4% |
| 4538975 | 191.1.1.12 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_8 | 0.51 | 41.0 | 4.14e-01 | 91.1% | 90.0% |
| 3611361 | 102.1.3.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › PAP/OAS1 substrate-binding domain | 0.50 | 44.0 | 3.93e-01 | 98.2% | 94.4% |
D2
high
residues 146-259
Domain cluster:
rep: LacPavin_0818_WC40_scaffold_269347_prodigal-single.1__X__X__00289__D25-121