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LacPavin_0818_WC40_scaffold_30711_prodigal-single.1__X__X__00018
Bact-VirLacPavin_0818_WC40_scaffold_30711_prodigal-single.1__X__X__00018
Identity
- Kingdom:
- phage
Quality
77.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 16-134
Domain cluster:
rep: IMGVR_UViG_3300009674_000561-3300009674-Ga0116173_10061665__D36-53_79-155
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ofyA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.58 | 26.0 | 3.36e-01 | 76.5% | 71.4% |
| 2pbiA02 | 1.10.1240.60 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › | 0.58 | 38.0 | 4.05e-01 | 78.2% | 77.2% |
| 1b04A03 | 1.10.287.610 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.58 | 23.0 | 3.10e-01 | 71.4% | 67.7% |
| 2o38A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.56 | 27.0 | 3.55e-01 | 77.3% | 83.1% |
| 1y7yA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.55 | 26.0 | 3.31e-01 | 77.3% | 75.4% |
| 1n1fA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.54 | 43.0 | 3.98e-01 | 98.3% | 66.0% |
| 6wh0A01 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.52 | 42.0 | 3.94e-01 | 88.2% | 92.1% |
| 1w2qA01 | 1.10.110.10 | Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › Plant lipid-transfer and hydrophobic proteins | 0.52 | 33.0 | 3.41e-01 | 82.4% | 66.4% |
| 4i2oA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 32.0 | 3.82e-01 | 78.2% | 95.0% |
| 1v9vA01 | 1.20.1480.20 | Mainly Alpha › Up-down Bundle › hypothetical protein mp506/mpn330, domain 1 › MAST3 pre-PK domain-like | 0.50 | 28.0 | 3.15e-01 | 79.8% | 68.4% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4407105 | 1075.5.1.2 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › MurJ | 0.59 | 42.0 | 3.29e-01 | 73.1% | 64.2% |
| 3475163 | 197.1.1.1 ↗ | alpha bundles › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › FERM_M | 0.51 | 36.0 | 3.60e-01 | 71.4% | 81.7% |
| 3647728 | 197.1.1.3 ↗ | alpha bundles › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › ACBP | 0.51 | 36.0 | 3.65e-01 | 71.4% | 93.0% |
D2
high
residues 148-200
Domain cluster:
representative
CATH (52)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2x4hA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.86 | 66.0 | 4.83e-01 | 81.1% | 33.3% |
| 2h7fX02 | 3.90.15.10 | Alpha Beta › Alpha-Beta Complex › Topoisomerase I; Chain A, domain 3 › Topoisomerase I; Chain A, domain 3 | 0.85 | 75.0 | 4.82e-01 | 100.0% | 24.5% |
| 2k0nA00 | 1.10.246.20 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Coactivator CBP, KIX domain | 0.85 | 66.0 | 5.54e-01 | 83.0% | 51.8% |
| 1fouA01 | 1.10.246.30 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.84 | 61.0 | 5.44e-01 | 77.4% | 55.4% |
| 2o8xA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 55.0 | 5.29e-01 | 94.3% | 60.7% |
| 3triA02 | 1.10.3730.10 | Mainly Alpha › Orthogonal Bundle › ProC C-terminal domain-like fold › ProC C-terminal domain-like | 0.79 | 62.0 | 4.93e-01 | 84.9% | 43.7% |
| 1ufhA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.79 | 58.0 | 4.18e-01 | 81.1% | 29.0% |
| 2hyjA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.78 | 60.0 | 6.29e-01 | 92.5% | 97.8% |
| 1un8A02 | 1.25.40.340 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › DhaL domain | 0.76 | 67.0 | 4.54e-01 | 100.0% | 76.6% |
| 4evxA00 | 1.10.1740.240 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › | 0.74 | 55.0 | 4.54e-01 | 81.1% | 49.5% |
| 1ufzA01 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.74 | 49.0 | 4.82e-01 | 77.4% | 63.8% |
| 1d3yA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 60.0 | 5.49e-01 | 92.5% | 71.8% |
| 2xmoA02 | 1.10.246.180 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.72 | 56.0 | 4.89e-01 | 88.7% | 68.6% |
| 1s8nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 51.0 | 5.00e-01 | 77.4% | 84.5% |
| 3h36A00 | 1.10.10.400 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Polyribonucleotide nucleotidyltransferase, RNA-binding domain | 0.70 | 54.0 | 4.79e-01 | 84.9% | 57.7% |
| 2kjgA00 | 1.20.120.970 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.70 | 55.0 | 4.49e-01 | 92.5% | 46.5% |
| 2vk9A03 | 1.10.3730.30 | Mainly Alpha › Orthogonal Bundle › ProC C-terminal domain-like fold › | 0.69 | 52.0 | 4.33e-01 | 88.7% | 44.9% |
| 3egoA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.69 | 59.0 | 4.62e-01 | 100.0% | 51.2% |
| 2hytA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.68 | 61.0 | 4.10e-01 | 100.0% | 27.5% |
| 2oi8A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.67 | 56.0 | 3.87e-01 | 100.0% | 33.5% |
| 2au3A04 | 1.20.50.30 | Mainly Alpha › Up-down Bundle › Pheromone ER-1 › | 0.66 | 49.0 | 4.89e-01 | 90.6% | 76.4% |
| 1irxA05 | 1.10.10.350 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.66 | 53.0 | 4.50e-01 | 96.2% | 52.7% |
| 2om6A02 | 1.10.150.400 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.65 | 53.0 | 4.83e-01 | 100.0% | 73.4% |
| 4dxwA02 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.65 | 50.0 | 3.98e-01 | 84.9% | 41.1% |
| 2xv4S03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 47.0 | 4.00e-01 | 79.2% | 51.1% |
| 2w02B06 | 1.10.340.60 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › AcsD, palm domain, helix bundle | 0.65 | 57.0 | 4.77e-01 | 100.0% | 75.0% |
| 4iggA01 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.64 | 51.0 | 4.75e-01 | 100.0% | 70.1% |
| 1bhpA00 | 3.30.1350.10 | Alpha Beta › 2-Layer Sandwich › Crambin › Thionin-like | 0.64 | 45.0 | 4.87e-01 | 81.1% | 86.7% |
| 4nqwA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 46.0 | 4.44e-01 | 83.0% | 98.4% |
| 1yirA00 | 3.20.140.10 | Alpha Beta › Alpha-Beta Barrel › nicotinate phosphoribosyltransferase › nicotinate phosphoribosyltransferase | 0.62 | 54.0 | 3.24e-01 | 100.0% | 21.3% |
| 1rr7A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.62 | 44.0 | 4.61e-01 | 75.5% | 87.0% |
| 1tqgA00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.61 | 54.0 | 4.35e-01 | 100.0% | 85.7% |
| 1w99A01 | 1.20.190.10 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain | 0.61 | 54.0 | 3.76e-01 | 100.0% | 44.5% |
| 3tklB01 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 52.0 | 4.92e-01 | 98.1% | 80.6% |
| 2w9zA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.61 | 51.0 | 3.95e-01 | 100.0% | 71.4% |
| 2xvtC00 | 1.10.150.510 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Receptor activity modifying family | 0.61 | 50.0 | 4.49e-01 | 98.1% | 81.0% |
| 1rktA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.60 | 49.0 | 3.64e-01 | 94.3% | 76.2% |
| 3no6A00 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.60 | 46.0 | 3.03e-01 | 100.0% | 19.1% |
| 2yx8A00 | 1.10.150.510 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Receptor activity modifying family | 0.60 | 48.0 | 4.27e-01 | 92.5% | 61.7% |
| 4f03B02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.59 | 52.0 | 3.80e-01 | 100.0% | 46.9% |
| 1zzpA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.59 | 49.0 | 3.89e-01 | 100.0% | 45.0% |
| 1vfiA00 | 1.10.246.100 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Vanadium-binding protein 2 | 0.59 | 45.0 | 3.90e-01 | 92.5% | 50.5% |
| 2wmmA01 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.58 | 46.0 | 4.79e-01 | 92.5% | 93.9% |
| 1zhcA00 | 6.10.280.50 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.58 | 43.0 | 3.93e-01 | 100.0% | 59.2% |
| 1nigA00 | 1.20.1200.10 | Mainly Alpha › Up-down Bundle › Hypothetical Protein Ta1238; Chain: A; › Cobalamin adenosyltransferase-like | 0.57 | 47.0 | 3.56e-01 | 98.1% | 82.9% |
| 3q18A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.56 | 46.0 | 3.68e-01 | 98.1% | 85.3% |
| 4h63K00 | 1.10.287.3490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.54 | 42.0 | 3.60e-01 | 100.0% | 50.0% |
| 4cpgA00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.54 | 44.0 | 4.11e-01 | 98.1% | 71.0% |
| 1wpaA01 | 6.10.140.340 | Special › Helix non-globular › Helix Hairpins › | 0.53 | 45.0 | 3.80e-01 | 100.0% | 55.6% |
| 5cwhA01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.53 | 41.0 | 3.04e-01 | 88.7% | 30.8% |
| 5ywwA01 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.53 | 39.0 | 3.07e-01 | 81.1% | 47.0% |
| 7z67A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 43.0 | 2.86e-01 | 92.5% | 68.8% |
ECOD (47)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5032166 | 1045.1.1.0 ↗ | alpha bundles › Rad50-binding domain of Mre11 › Rad50-binding domain of Mre11 › Rad50-binding domain of Mre11 | 0.90 | 68.0 | 6.12e-01 | 79.2% | 60.9% |
| 5052614 | 3831.1.1.0 ↗ | alpha bundles › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 | 0.88 | 70.0 | 5.39e-01 | 84.9% | 40.9% |
| 3566700 | 1008.1.1.0 ↗ | alpha bundles › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain | 0.87 | 69.0 | 5.70e-01 | 84.9% | 50.0% |
| 4345163 | 633.10.1.28 ↗ | alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like › PF27080 | 0.87 | 67.0 | 5.14e-01 | 86.8% | 38.3% |
| 3915027 | 4120.1.1.0 ↗ | few secondary structure elements › Tim10/DDP › Tim10/DDP › Tim10/DDP | 0.86 | 66.0 | 5.93e-01 | 83.0% | 61.4% |
| 2832868 | 2498.5.1.0 ↗ | mixed a+b and a/b › Zincin-like › GroEL-intermediate domain like › GroEL-intermediate domain like | 0.86 | 58.0 | 6.27e-01 | 73.6% | 84.1% |
| 5007439 | 5054.1.1.6 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH | 0.86 | 69.0 | 5.13e-01 | 86.8% | 36.8% |
| 3385808 | 5054.1.1.6 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH | 0.85 | 67.0 | 5.19e-01 | 84.9% | 40.9% |
| 3973864 | 6026.1.1.2 ↗ | alpha duplicates or obligate multimers › cwf21 domain › cwf21 domain › cwf21 domain › GlpM | 0.85 | 65.0 | 5.08e-01 | 84.9% | 40.4% |
| 5058468 | 5058.1.1.0 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region | 0.83 | 66.0 | 5.78e-01 | 86.8% | 60.0% |
| 4992012 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.82 | 74.0 | 7.09e-01 | 100.0% | 86.7% |
| 5049280 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.82 | 71.0 | 6.52e-01 | 98.1% | 75.7% |
| 4268621 | 320.6.1.1 ↗ | a+b two layers › R3H domain-like › Cysteine methyltransferase effector NleE › Cysteine methyltransferase effector NleE › NleE | 0.80 | 65.0 | 4.22e-01 | 98.1% | 22.1% |
| 3268143 | 2498.5.1.0 ↗ | mixed a+b and a/b › Zincin-like › GroEL-intermediate domain like › GroEL-intermediate domain like | 0.80 | 60.0 | 5.14e-01 | 79.2% | 83.7% |
| 3944885 | 101.1.1.355 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF2857 | 0.79 | 64.0 | 6.01e-01 | 96.2% | 72.3% |
| 3396658 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.79 | 62.0 | 3.52e-01 | 84.9% | 8.9% |
| 4996580 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.79 | 64.0 | 5.22e-01 | 88.7% | 54.7% |
| 3749766 | 7023.1.1.2 ↗ | alpha bundles › helical ridge domain of D-alanyl transfer protein › helical ridge domain of D-alanyl transfer protein › helical ridge domain of D-alanyl transfer protein › Pex2_Pex12 | 0.78 | 67.0 | 5.31e-01 | 98.1% | 87.3% |
| 4176000 | 4954.1.1.1 ↗ | a+b complex topology › central helical domain in RNA-polymerase beta-prime subunit › central helical domain in RNA-polymerase beta-prime subunit › central helical domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_5 | 0.77 | 70.0 | 4.69e-01 | 100.0% | 65.3% |
| 3197604 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.77 | 66.0 | 4.77e-01 | 96.2% | 43.6% |
| 3473298 | 3277.2.1.1 ↗ | alpha arrays › Thymine dioxygenase JBP1 DNA-binding domain-like › a C-terminal domain in chromodomain helicase DNA-binding protein 1 › a C-terminal domain in chromodomain helicase DNA-binding protein 1 › CHD1-like_C | 0.77 | 67.0 | 5.23e-01 | 100.0% | 49.6% |
| 3597348 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.77 | 58.0 | 3.58e-01 | 84.9% | 14.4% |
| 4017461 | 3860.1.1.0 ↗ | alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm | 0.75 | 64.0 | 5.31e-01 | 100.0% | 61.0% |
| 5064133 | 101.8.1.0 ↗ | alpha arrays › HTH › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › An anticodon-binding domain of class I aminoacyl-tRNA synthetases | 0.75 | 58.0 | 4.01e-01 | 94.3% | 25.1% |
| 4632127 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.74 | 58.0 | 4.95e-01 | 84.9% | 83.5% |
| 3717244 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 56.0 | 5.19e-01 | 92.5% | 64.3% |
| 3246384 | 5076.2.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ › EI24 | 0.73 | 62.0 | 3.95e-01 | 94.3% | 67.1% |
| 2407303 | 2005.1.1.25 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › HIGH_NTase1 | 0.73 | 58.0 | 3.57e-01 | 84.9% | 21.3% |
| 2913 | 101.21.1.1 ↗ | alpha arrays › HTH › HTH domain in DNA topoisomerase IV alpha subunit › HTH domain in DNA topoisomerase IV alpha subunit › TP6A_N | 0.73 | 60.0 | 5.49e-01 | 92.5% | 71.8% |
| 4955389 | 101.1.1.542 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF790 | 0.72 | 61.0 | 6.07e-01 | 96.2% | 90.9% |
| 3402081 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.72 | 51.0 | 4.21e-01 | 96.2% | 43.3% |
| 3398490 | 101.1.1.112 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › MADF_DNA_bdg | 0.70 | 58.0 | 5.48e-01 | 98.1% | 76.9% |
| 5018461 | 1076.1.1.4 ↗ | alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › PrsW-protease | 0.68 | 53.0 | 3.47e-01 | 84.9% | 60.4% |
| 3979215 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.68 | 53.0 | 5.30e-01 | 96.2% | 83.6% |
| 3402099 | 5043.2.1.5 ↗ | extended segments › Sensor proteins transmembrane domains › NarQ transmembrane domain › NarQ transmembrane domain › ATP_synt_H | 0.66 | 53.0 | 4.74e-01 | 92.5% | 62.7% |
| 3420477 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.66 | 54.0 | 4.23e-01 | 100.0% | 43.1% |
| 3865528 | 101.35.1.8 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › DUF4560 | 0.65 | 54.0 | 5.27e-01 | 100.0% | 85.0% |
| 3219209 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.64 | 51.0 | 4.73e-01 | 92.5% | 71.4% |
| 3605475 | 140.1.1.14 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › tRNA-synt_1e | 0.61 | 54.0 | 3.51e-01 | 100.0% | 25.4% |
| 4980095 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.60 | 52.0 | 4.23e-01 | 100.0% | 83.8% |
| 3453124 | 2003.1.3.18 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › NAD_binding_8, Pyr_redox_3 | 0.60 | 51.0 | 3.10e-01 | 100.0% | 21.3% |
| 7966 | 4330.1.1.1 ↗ | few secondary structure elements › Vanabin-like › Vanabin-like › Vanabin-like › Vanabin-2 | 0.59 | 45.0 | 3.93e-01 | 92.5% | 52.2% |
| 3471120 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.59 | 50.0 | 4.66e-01 | 98.1% | 76.9% |
| 4141957 | 140.1.1.4 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › tRNA-synt_1e,DALR_2 | 0.58 | 49.0 | 3.52e-01 | 100.0% | 41.1% |
| 4498935 | 140.1.1.7 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DALR_2 | 0.57 | 50.0 | 3.85e-01 | 100.0% | 48.8% |
| 3173846 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.57 | 48.0 | 3.32e-01 | 96.2% | 30.3% |
| 5030281 | 140.1.1.7 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DALR_2 | 0.56 | 48.0 | 3.57e-01 | 100.0% | 40.0% |