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LacPavin_0818_WC40_scaffold_30711_prodigal-single.1__X__X__00061

Bact-Vir

LacPavin_0818_WC40_scaffold_30711_prodigal-single.1__X__X__00061

Identity

Kingdom:
phage

Quality

82.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-51
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3mk7C01 6.10.280.130 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.58 46.0 3.60e-01 88.6% 66.0%
4onsB00 6.10.250.2780 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.52 37.0 3.56e-01 100.0% 66.1%
3oymA04 6.10.20.110 Special › Helix non-globular › Arc Repressor Mutant, subunit A › 0.51 41.0 4.05e-01 88.6% 87.0%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4857392 5054.1.1.6 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH 0.63 50.0 4.52e-01 100.0% 62.9%
4945537 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.58 51.0 3.70e-01 100.0% 47.5%
5027742 2003.1.5.66 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.56 42.0 2.66e-01 84.1% 36.5%
4019394 109.4.1.345 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Gcn1_N 0.54 44.0 2.95e-01 100.0% 24.8%
3633449 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.54 49.0 3.25e-01 100.0% 41.2%
4959289 606.1.1.0 alpha complex topology › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain 0.54 45.0 3.62e-01 100.0% 49.5%