LacPavin_0818_WC40_scaffold_30711_prodigal-single.1XX__00110

Bact-Vir

LacPavin_0818_WC40_scaffold_30711_prodigal-single.1__X__X__00110

Identity

90.4 mean pLDDT

View cluster (7 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-90

PDB

Domain cluster: representative

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1xdpA01	1.20.58.310	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Polyphosphate kinase N-terminal domain	0.78	52.0	4.93e-01	74.4%	58.1%
1ij5A01	1.20.58.90	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.72	49.0	5.30e-01	71.1%	97.4%
3pltA00	1.20.1270.60	Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain	0.67	56.0	4.22e-01	90.0%	56.5%
7rkxR01	1.20.1070.10	Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins	0.64	49.0	3.47e-01	80.0%	61.3%
2zxeA02	1.20.1110.10	Mainly Alpha › Up-down Bundle › Calcium-transporting ATPase, transmembrane domain › Calcium-transporting ATPase, transmembrane domain	0.57	46.0	3.00e-01	90.0%	39.2%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3760049	603.1.1.0 ↗	alpha bundles › STAT-like › t-snare proteins › t-snare proteins	0.75	59.0	5.58e-01	82.2%	70.5%
3272165	4207.1.1.0 ↗	alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › RNA polymerase II holoenzyme component SRB7 (MED21)	0.68	50.0	4.68e-01	76.7%	84.5%

D2 high residues 110-198

PDB

Domain cluster: rep: CAKLQH020000022.1__CAH1092050.1__SAMEA5780036_02877__00050__D143-214

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01464.26 best	SLT	65.9	3.40e-18	92.1%	64.1%