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LacPavin_0818_WC40_scaffold_30711_prodigal-single.1__X__X__00152
Bact-VirLacPavin_0818_WC40_scaffold_30711_prodigal-single.1__X__X__00152
Identity
- Kingdom:
- phage
Quality
75.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 28-118
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3hhwK01 | 1.10.3570.10 | Mainly Alpha › Orthogonal Bundle › Rhabdovirus nucleoprotein-like fold › Rhabdovirus nucleocapsid protein like domain | 0.55 | 42.0 | 3.47e-01 | 85.7% | 85.8% |
| 3b49A00 | 3.20.80.10 | Alpha Beta › Alpha-Beta Barrel › Multidrug-efflux Transporter 1 Regulator Bmrr; Chain A › Regulatory factor, effector binding domain | 0.52 | 41.0 | 3.22e-01 | 93.4% | 38.2% |
| 5eo9A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 34.0 | 3.24e-01 | 100.0% | 56.1% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4985317 | 4139.1.1.1 ↗ | a+b two layers › AMMECR1-like › AMMECR1-like › AMMECR1-like › AMMECR1 | 0.55 | 36.0 | 3.57e-01 | 100.0% | 61.0% |
| 3256200 | 109.4.1.668 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Cse1 | 0.53 | 40.0 | 2.92e-01 | 79.1% | 37.6% |