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LacPavin_0818_WC40_scaffold_30711_prodigal-single.1__X__X__00313
Bact-VirLacPavin_0818_WC40_scaffold_30711_prodigal-single.1__X__X__00313
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 24-122
Domain cluster:
rep: OR553905.1__WNN95053.1__SEA_MAGRITTE_76__00076__D29-130
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1l1oF01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 57.0 | 5.27e-01 | 100.0% | 68.7% |
| 3u50C01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.67 | 60.0 | 5.53e-01 | 100.0% | 81.1% |
| 1cukA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.66 | 42.0 | 4.98e-01 | 99.0% | 97.0% |
| 2egtA01 | 6.20.50.50 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.66 | 21.0 | 3.57e-01 | 86.9% | 100.0% |
| 1nnxA00 | 2.40.50.200 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Bacterial OB-fold | 0.64 | 43.0 | 4.46e-01 | 100.0% | 73.1% |
| 2z1cB00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 36.0 | 4.00e-01 | 99.0% | 70.3% |
| 1bvsA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.63 | 41.0 | 4.80e-01 | 99.0% | 98.5% |
| 4gnxC03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.63 | 56.0 | 4.64e-01 | 100.0% | 74.3% |
| 1ixrA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 39.0 | 4.56e-01 | 98.0% | 100.0% |
| 2rdgA02 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.61 | 42.0 | 4.69e-01 | 100.0% | 97.2% |
| 8aasC01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 39.0 | 3.90e-01 | 100.0% | 62.7% |
| 1wi5A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.60 | 42.0 | 4.68e-01 | 99.0% | 97.3% |
| 3go5A01 | 2.40.50.330 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.60 | 36.0 | 4.07e-01 | 99.0% | 83.1% |
| 3d31A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 30.0 | 4.04e-01 | 99.0% | 100.0% |
| 4da2A01 | 2.40.50.580 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.58 | 40.0 | 4.37e-01 | 100.0% | 88.6% |
| 2xgtB01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 43.0 | 4.36e-01 | 100.0% | 78.2% |
| 2nttA02 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.57 | 38.0 | 4.28e-01 | 100.0% | 95.7% |
| 2yyzA02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.57 | 31.0 | 3.70e-01 | 100.0% | 86.2% |
| 1u0lA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 35.0 | 4.05e-01 | 99.0% | 96.9% |
| 3kbgA02 | 2.40.50.740 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain | 0.55 | 31.0 | 3.95e-01 | 99.0% | 100.0% |
| 4up7A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 42.0 | 3.66e-01 | 100.0% | 53.3% |
| 2cs7A00 | 3.10.50.90 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.55 | 31.0 | 3.86e-01 | 70.7% | 98.2% |
| 3m4pA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 42.0 | 4.07e-01 | 100.0% | 78.6% |
| 4e69A00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.52 | 38.0 | 2.72e-01 | 77.8% | 37.4% |
| 4cbvA02 | 2.40.50.1020 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › LytTr DNA-binding domain | 0.51 | 33.0 | 3.13e-01 | 76.8% | 53.4% |
| 1gcqB00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.51 | 27.0 | 3.34e-01 | 100.0% | 86.0% |
| 2of5H00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.51 | 41.0 | 4.15e-01 | 90.9% | 88.0% |
| 1v1aA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.51 | 37.0 | 2.66e-01 | 75.8% | 35.9% |
| 3ottA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.50 | 35.0 | 2.59e-01 | 73.7% | 87.3% |
ECOD (59)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3283647 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.72 | 67.0 | 6.15e-01 | 100.0% | 94.4% |
| 5037218 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.72 | 41.0 | 4.27e-01 | 98.0% | 61.1% |
| 4360971 | 2.1.1.293 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF27162 | 0.71 | 46.0 | 5.45e-01 | 99.0% | 100.0% |
| 4996494 | 2.14.1.1 ↗ | beta barrels › OB-fold › HupF/HypC-like › HupF/HypC-like › HupF_HypC | 0.69 | 38.0 | 4.12e-01 | 100.0% | 62.4% |
| 4087867 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.67 | 42.0 | 5.02e-01 | 99.0% | 96.9% |
| 5058404 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.67 | 43.0 | 4.21e-01 | 100.0% | 59.1% |
| 4442866 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.67 | 42.0 | 5.03e-01 | 99.0% | 98.5% |
| 4128954 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.66 | 45.0 | 5.15e-01 | 99.0% | 98.6% |
| 4886291 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.66 | 42.0 | 4.96e-01 | 96.0% | 96.9% |
| 4038328 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.66 | 42.0 | 4.94e-01 | 99.0% | 96.9% |
| 4506647 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.66 | 41.0 | 4.88e-01 | 99.0% | 96.9% |
| 4337382 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.65 | 42.0 | 4.70e-01 | 99.0% | 85.3% |
| 4534526 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.65 | 41.0 | 4.87e-01 | 99.0% | 96.9% |
| 4407567 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.65 | 41.0 | 4.86e-01 | 99.0% | 98.5% |
| 4219215 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.64 | 41.0 | 4.60e-01 | 99.0% | 85.3% |
| 4264254 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.64 | 41.0 | 4.56e-01 | 99.0% | 84.0% |
| 4458321 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.64 | 40.0 | 4.76e-01 | 99.0% | 96.9% |
| 4436860 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.64 | 41.0 | 4.84e-01 | 100.0% | 100.0% |
| 4193853 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.64 | 41.0 | 4.80e-01 | 99.0% | 98.5% |
| 4166380 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.64 | 41.0 | 4.78e-01 | 99.0% | 98.5% |
| 4192004 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.64 | 43.0 | 4.91e-01 | 99.0% | 97.1% |
| 3739002 | 2.1.1.123 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CDC24_OB3 | 0.63 | 44.0 | 4.68e-01 | 100.0% | 83.5% |
| 4069150 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.63 | 40.0 | 4.69e-01 | 99.0% | 96.9% |
| 4668516 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.63 | 40.0 | 4.70e-01 | 99.0% | 96.9% |
| 4049278 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.63 | 40.0 | 4.49e-01 | 99.0% | 85.3% |
| 4045978 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.62 | 40.0 | 4.70e-01 | 97.0% | 98.5% |
| 4445324 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.62 | 40.0 | 4.70e-01 | 94.9% | 98.5% |
| 5036389 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.62 | 43.0 | 4.15e-01 | 100.0% | 63.6% |
| 4175900 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.62 | 40.0 | 4.44e-01 | 99.0% | 85.3% |
| 4059805 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.62 | 40.0 | 4.58e-01 | 99.0% | 98.5% |
| 4159859 | 2.1.1.127 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 | 0.62 | 46.0 | 4.63e-01 | 100.0% | 77.0% |
| 4046557 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.62 | 40.0 | 4.66e-01 | 100.0% | 100.0% |
| 4955040 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.62 | 43.0 | 4.64e-01 | 100.0% | 90.0% |
| 4322651 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.62 | 40.0 | 4.53e-01 | 99.0% | 98.5% |
| 3214209 | 2.1.1.224 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29084 | 0.61 | 40.0 | 3.84e-01 | 100.0% | 56.5% |
| 4487060 | 2.1.1.38 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_RNB | 0.61 | 38.0 | 4.41e-01 | 97.0% | 93.8% |
| 4551354 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.61 | 39.0 | 4.39e-01 | 99.0% | 85.3% |
| 4270030 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.61 | 39.0 | 4.55e-01 | 100.0% | 100.0% |
| 4097524 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.61 | 41.0 | 4.70e-01 | 100.0% | 98.6% |
| 3958012 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.61 | 39.0 | 4.10e-01 | 100.0% | 72.2% |
| 4383068 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 45.0 | 4.87e-01 | 100.0% | 97.5% |
| 3587502 | 2.1.1.38 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_RNB | 0.60 | 39.0 | 4.34e-01 | 99.0% | 86.7% |
| 4316390 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.60 | 38.0 | 4.49e-01 | 94.9% | 98.5% |
| 3989629 | 2.1.1.38 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_RNB | 0.60 | 39.0 | 4.40e-01 | 99.0% | 92.9% |
| 4182979 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 39.0 | 4.57e-01 | 97.0% | 100.0% |
| 4441925 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.59 | 42.0 | 3.74e-01 | 100.0% | 51.0% |
| 4385582 | 2.10.1.1 ↗ | beta barrels › OB-fold › CheW › CheW › CheW | 0.59 | 39.0 | 3.56e-01 | 100.0% | 49.6% |
| 4138994 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.58 | 39.0 | 4.48e-01 | 97.0% | 98.6% |
| 5044072 | 2.1.1.83 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SfsA_N | 0.58 | 40.0 | 4.48e-01 | 100.0% | 96.0% |
| 3884439 | 2.1.1.68 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RMI1_C | 0.58 | 51.0 | 4.65e-01 | 100.0% | 76.3% |
| 4022191 | 633.23.1.9 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › SUR7 | 0.56 | 41.0 | 3.27e-01 | 78.8% | 64.4% |
| 4969369 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.56 | 41.0 | 3.87e-01 | 100.0% | 62.4% |
| 2389853 | 2.11.1.1 ↗ | beta barrels › OB-fold › Antifungal protein (AGAFP) › Antifungal protein (AGAFP) › Antifungal_prot | 0.56 | 32.0 | 3.87e-01 | 96.0% | 94.7% |
| 3930707 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.54 | 41.0 | 2.91e-01 | 82.8% | 62.5% |
| 4269668 | 7000.1.1.0 ↗ | alpha arrays › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS | 0.54 | 28.0 | 3.69e-01 | 98.0% | 92.7% |
| 4018255 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.53 | 39.0 | 2.46e-01 | 77.8% | 44.3% |
| 4937552 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 40.0 | 4.00e-01 | 100.0% | 77.9% |
| 3602417 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.50 | 44.0 | 3.83e-01 | 100.0% | 65.6% |
| 4656873 | 4337.1.1.0 ↗ | a+b two layers › DNA mismatch repair protein MutL dimerization subdomain › DNA mismatch repair protein MutL dimerization subdomain › DNA mismatch repair protein MutL dimerization subdomain | 0.50 | 41.0 | 3.90e-01 | 92.9% | 87.9% |
D2
high
residues 130-239
Domain cluster:
rep: 5H_04062016_scaffold_1_prodigal-single.1__X__X__00437__D55-187
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3jv1A00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.63 | 47.0 | 4.02e-01 | 92.7% | 47.3% |
| 2lyxA00 | 3.10.450.390 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Protein of unknown function DUF3889 | 0.63 | 45.0 | 4.96e-01 | 74.5% | 100.0% |
| 3h4zB03 | 3.15.10.50 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › | 0.62 | 43.0 | 3.60e-01 | 70.9% | 66.0% |
| 3k25A00 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.60 | 49.0 | 3.56e-01 | 86.4% | 94.4% |
| 7ufsA01 | 2.70.98.30 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 | 0.60 | 48.0 | 3.63e-01 | 86.4% | 89.7% |
| 6jqlA03 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.59 | 40.0 | 3.45e-01 | 70.0% | 95.5% |
| 1pu4A03 | 2.70.98.20 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain | 0.59 | 46.0 | 3.14e-01 | 83.6% | 93.6% |
| 5eo6B00 | 3.40.1500.10 | Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › Coproporphyrinogen III oxidase, aerobic | 0.59 | 53.0 | 3.87e-01 | 100.0% | 66.8% |
| 2bngC00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 45.0 | 4.20e-01 | 82.7% | 91.4% |
| 2q03A00 | 2.40.350.10 | Mainly Beta › Beta Barrel › AOC barrel-like › SO1590-like | 0.58 | 42.0 | 3.93e-01 | 74.5% | 68.4% |
| 1yq2A05 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.58 | 48.0 | 3.44e-01 | 87.3% | 95.3% |
| 3obaA05 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.58 | 40.0 | 2.97e-01 | 70.9% | 43.3% |
| 3e99A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 39.0 | 3.59e-01 | 70.0% | 93.2% |
| 1tu1A00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.57 | 46.0 | 4.18e-01 | 84.5% | 66.0% |
| 1lkfA00 | 2.70.240.10 | Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA | 0.57 | 46.0 | 3.38e-01 | 86.4% | 96.6% |
| 4o4oA00 | 2.40.128.590 | Mainly Beta › Beta Barrel › Lipocalin › CpcT/CpeT domain | 0.57 | 50.0 | 4.20e-01 | 100.0% | 79.2% |
| 3g8zA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 39.0 | 3.71e-01 | 70.0% | 92.2% |
| 3c4bA02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.56 | 33.0 | 4.00e-01 | 95.5% | 94.0% |
| 8gn6A01 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.55 | 48.0 | 3.46e-01 | 98.2% | 93.9% |
| 1tkjA00 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.55 | 49.0 | 3.70e-01 | 100.0% | 85.9% |
| 1fw3A00 | 2.40.230.10 | Mainly Beta › Beta Barrel › Outer membrane phospholipase (ompla); Chain C › Phospholipase A1 | 0.54 | 47.0 | 3.68e-01 | 97.3% | 100.0% |
| 1pzdA01 | 2.60.40.1480 | Mainly Beta › Sandwich › Immunoglobulin-like › Coatomer, gamma subunit, appendage domain | 0.54 | 42.0 | 3.77e-01 | 83.6% | 96.8% |
| 4bs9A05 | 3.30.160.660 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.53 | 42.0 | 4.19e-01 | 85.5% | 88.6% |
| 2d4rA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 46.0 | 4.23e-01 | 99.1% | 83.6% |
| 1nqfA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.52 | 38.0 | 2.55e-01 | 76.4% | 22.6% |
| 2w4yA00 | 2.40.160.220 | Mainly Beta › Beta Barrel › Porin › | 0.52 | 46.0 | 4.44e-01 | 95.5% | 91.0% |
| 3eyrA00 | 3.15.10.40 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Uncharacterised protein PF07273 family, DUF1439 | 0.52 | 42.0 | 3.70e-01 | 90.0% | 82.2% |
| 1a0sP00 | 2.40.170.10 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › Porin, LamB type | 0.52 | 45.0 | 3.03e-01 | 94.5% | 33.4% |
| 4yzgA00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.51 | 45.0 | 3.36e-01 | 99.1% | 84.0% |
| 3ua3A03 | 2.70.160.11 | Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 | 0.51 | 38.0 | 3.15e-01 | 79.1% | 100.0% |
| 1a2vA03 | 2.70.98.20 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain | 0.51 | 43.0 | 2.94e-01 | 96.4% | 70.4% |
| 1qxyA00 | 3.90.230.10 | Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily | 0.51 | 38.0 | 3.00e-01 | 80.9% | 89.6% |
| 4ec6A00 | 3.10.450.540 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 40.0 | 4.05e-01 | 85.5% | 98.2% |
ECOD (51)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3339476 | 897.1.1.1 ↗ | a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 › MAM33 | 0.67 | 50.0 | 4.24e-01 | 85.5% | 48.3% |
| 3606318 | 897.1.1.0 ↗ | a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 | 0.64 | 53.0 | 4.29e-01 | 90.9% | 52.3% |
| 3740622 | 12.3.1.3 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim | 0.64 | 52.0 | 3.60e-01 | 86.4% | 91.1% |
| 3699678 | 897.1.1.1 ↗ | a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 › MAM33 | 0.64 | 48.0 | 4.00e-01 | 92.7% | 45.8% |
| 3805100 | 881.1.1.1 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP | 0.63 | 45.0 | 3.81e-01 | 75.5% | 53.2% |
| 5052250 | 12.3.1.15 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › AmyA-gluTrfs_C | 0.62 | 50.0 | 3.63e-01 | 85.5% | 95.2% |
| 3203571 | 9.13.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › DUF3237 | 0.61 | 43.0 | 3.96e-01 | 71.8% | 62.1% |
| 4928436 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.61 | 44.0 | 4.09e-01 | 76.4% | 63.4% |
| 3396206 | 243.3.1.35 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF229 | 0.61 | 44.0 | 3.98e-01 | 74.5% | 82.0% |
| 3519076 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.61 | 43.0 | 3.95e-01 | 73.6% | 81.4% |
| 3517320 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.61 | 43.0 | 4.30e-01 | 72.7% | 85.5% |
| 3258590 | 4210.1.1.0 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain | 0.61 | 39.0 | 4.15e-01 | 79.1% | 74.7% |
| 3275961 | 331.3.1.17 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt | 0.60 | 54.0 | 4.45e-01 | 100.0% | 88.0% |
| 4955671 | 7089.1.1.0 ↗ | a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD | 0.60 | 38.0 | 4.33e-01 | 76.4% | 87.5% |
| 3487861 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.60 | 48.0 | 3.27e-01 | 85.5% | 42.6% |
| 3074009 | 9.1.1.31 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › VtrC | 0.60 | 44.0 | 4.15e-01 | 79.1% | 63.2% |
| 3585435 | 243.3.1.35 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF229 | 0.60 | 42.0 | 3.98e-01 | 73.6% | 77.0% |
| 4588517 | 12.3.1.3 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim | 0.60 | 48.0 | 3.38e-01 | 85.5% | 92.7% |
| 3508384 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.60 | 42.0 | 4.15e-01 | 73.6% | 80.0% |
| 3570251 | 5.1.4.288 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › APEH_N | 0.59 | 42.0 | 2.81e-01 | 72.7% | 22.7% |
| 3303563 | 881.1.1.1 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP | 0.59 | 42.0 | 3.79e-01 | 75.5% | 56.2% |
| 3255874 | 331.3.1.17 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt | 0.59 | 52.0 | 4.38e-01 | 100.0% | 89.7% |
| 3820010 | 881.1.1.1 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP | 0.59 | 43.0 | 3.80e-01 | 76.4% | 56.9% |
| 3456369 | 897.1.1.1 ↗ | a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 › MAM33 | 0.59 | 46.0 | 3.87e-01 | 89.1% | 49.2% |
| 3862045 | 11.1.1.640 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ZP-N | 0.58 | 44.0 | 4.39e-01 | 79.1% | 95.7% |
| 3405090 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.58 | 51.0 | 4.41e-01 | 100.0% | 80.0% |
| 4042799 | 9.1.1.9 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › CpeT | 0.58 | 51.0 | 4.26e-01 | 100.0% | 81.5% |
| 3181774 | 12.3.1.6 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Bgal_small_N | 0.58 | 46.0 | 3.27e-01 | 85.5% | 89.7% |
| 3748213 | 331.3.1.17 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt | 0.57 | 50.0 | 3.79e-01 | 98.2% | 52.9% |
| 3393501 | 243.3.1.35 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF229 | 0.57 | 42.0 | 3.96e-01 | 76.4% | 77.8% |
| 3534691 | 4051.1.1.2 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A | 0.56 | 49.0 | 4.38e-01 | 100.0% | 73.3% |
| 3272267 | 5.1.4.166 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_DCAF4 | 0.56 | 42.0 | 2.92e-01 | 80.9% | 26.4% |
| 3056279 | 4051.1.1.2 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A | 0.55 | 49.0 | 4.33e-01 | 100.0% | 72.4% |
| 3393657 | 243.3.1.35 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF229 | 0.55 | 39.0 | 3.76e-01 | 72.7% | 80.0% |
| 3824321 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.55 | 40.0 | 4.36e-01 | 76.4% | 100.0% |
| 3875809 | 4051.1.1.2 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A | 0.55 | 49.0 | 4.31e-01 | 100.0% | 71.5% |
| 3858387 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 46.0 | 2.85e-01 | 93.6% | 30.5% |
| 3749122 | 5.1.3.176 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › APEH_N | 0.55 | 47.0 | 3.21e-01 | 93.6% | 45.8% |
| 3435849 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.54 | 41.0 | 4.44e-01 | 86.4% | 98.9% |
| 3996943 | 331.3.1.17 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt | 0.54 | 43.0 | 3.97e-01 | 87.3% | 66.9% |
| 3438237 | 12.3.1.2 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Cu_amine_oxid | 0.53 | 44.0 | 3.41e-01 | 89.1% | 86.5% |
| 3633013 | 243.1.1.12 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TIM21 | 0.53 | 42.0 | 3.85e-01 | 84.5% | 79.3% |
| 4613375 | 222.1.1.0 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase | 0.53 | 41.0 | 3.40e-01 | 82.7% | 78.5% |
| 3270312 | 4051.1.1.2 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A | 0.53 | 46.0 | 4.01e-01 | 100.0% | 70.3% |
| 5010189 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.53 | 46.0 | 4.23e-01 | 94.5% | 87.8% |
| 5009761 | 331.3.1.7 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › COXG | 0.52 | 45.0 | 4.18e-01 | 100.0% | 85.5% |
| 2771632 | 4252.1.1.0 ↗ | beta barrels › AttH-like › AttH-like › AttH-like | 0.51 | 37.0 | 3.15e-01 | 99.1% | 45.0% |
| 5020831 | 881.4.1.2 ↗ | a+b three layers › Mog1p/PsbP-like › C-terminal domain in sigma-E factor regulatory protein rseB › C-terminal domain in sigma-E factor regulatory protein rseB › DUF4367 | 0.51 | 35.0 | 3.43e-01 | 71.8% | 88.0% |
| 3178572 | 11.1.1.1134 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF29154 | 0.50 | 42.0 | 3.53e-01 | 94.5% | 61.5% |
| 5035736 | 71.1.1.26 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › DUF3108 | 0.50 | 43.0 | 3.82e-01 | 98.2% | 89.4% |
| 137905 | 883.1.1.5 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › DUF1439 | 0.50 | 41.0 | 3.67e-01 | 94.5% | 74.9% |
D3
high
residues 256-366
Domain cluster:
rep: SR-VP_0-2_scaffold_141_316084_prodigal-single.1__X__X__00212__D227-319
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2pkeA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.66 | 44.0 | 5.22e-01 | 95.5% | 97.4% |
| 2qsbA00 | 1.20.1440.50 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Ta0600-like | 0.59 | 41.0 | 4.52e-01 | 92.8% | 94.1% |
| 1ki1B01 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.57 | 42.0 | 3.49e-01 | 77.5% | 91.0% |
| 3dbyL00 | 1.20.1260.120 | Mainly Alpha › Up-down Bundle › Ferritin › Protein of unknown function DUF2935 | 0.57 | 49.0 | 3.76e-01 | 98.2% | 40.4% |
| 1foeA01 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.55 | 40.0 | 3.36e-01 | 75.7% | 93.5% |
| 4gouA03 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.55 | 42.0 | 3.54e-01 | 81.1% | 91.9% |
| 3buxB01 | 1.20.930.20 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Adaptor protein Cbl, N-terminal domain | 0.54 | 40.0 | 3.88e-01 | 80.2% | 85.3% |
| 5mq1A00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.53 | 44.0 | 4.47e-01 | 98.2% | 92.6% |
| 3k2jA00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.53 | 46.0 | 4.51e-01 | 99.1% | 88.4% |
| 4gyvE00 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.52 | 40.0 | 3.28e-01 | 82.0% | 87.0% |
| 2jswA00 | 1.20.1410.10 | Mainly Alpha › Up-down Bundle › I/LWEQ domain › I/LWEQ domain | 0.52 | 45.0 | 3.80e-01 | 94.6% | 79.9% |
| 2yqdA00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.52 | 47.0 | 4.59e-01 | 99.1% | 95.0% |
| 2nrlA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.52 | 42.0 | 3.85e-01 | 87.4% | 92.4% |
| 2yw5A00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.52 | 46.0 | 4.29e-01 | 99.1% | 79.7% |
| 3ztaA00 | 1.10.490.130 | Mainly Alpha › Orthogonal Bundle › Globin-like › | 0.52 | 37.0 | 3.48e-01 | 74.8% | 81.3% |
| 2ig3A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.51 | 40.0 | 3.88e-01 | 83.8% | 89.0% |
| 3hmfA00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.51 | 46.0 | 4.54e-01 | 99.1% | 97.4% |
| 1x42A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.51 | 36.0 | 4.02e-01 | 93.7% | 97.6% |
| 1d2tA00 | 1.20.144.10 | Mainly Alpha › Up-down Bundle › Vanadium-containing Chloroperoxidase; domain 1 › Phosphatidic acid phosphatase type 2/haloperoxidase | 0.51 | 46.0 | 3.69e-01 | 100.0% | 73.0% |
| 3kavA00 | 1.20.1270.360 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.51 | 39.0 | 4.09e-01 | 98.2% | 91.2% |
| 5n13A00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.51 | 44.0 | 4.48e-01 | 95.5% | 100.0% |
| 1or4B00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.51 | 40.0 | 3.63e-01 | 86.5% | 80.4% |
| 5c8gB00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.51 | 42.0 | 4.22e-01 | 99.1% | 88.9% |
| 3uitA02 | 1.20.1270.460 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.50 | 42.0 | 3.99e-01 | 90.1% | 81.5% |
| 1xjuA00 | 1.10.530.40 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.50 | 34.0 | 3.09e-01 | 97.3% | 48.7% |
| 4d0nB01 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.50 | 42.0 | 3.34e-01 | 93.7% | 57.1% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3656227 | 633.7.1.0 ↗ | alpha bundles › Bromodomain-like › Bacillus cereus metalloprotein-like › Bacillus cereus metalloprotein-like | 0.57 | 50.0 | 4.80e-01 | 98.2% | 96.2% |
| 3612403 | 7015.1.1.0 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain | 0.56 | 48.0 | 4.42e-01 | 94.6% | 73.1% |
| 5034492 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.55 | 41.0 | 3.08e-01 | 78.4% | 76.2% |
| 3887645 | 633.21.1.10 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › MARVEL | 0.54 | 46.0 | 4.37e-01 | 92.8% | 83.8% |
| 4944333 | 633.10.1.0 ↗ | alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like | 0.54 | 45.0 | 4.40e-01 | 92.8% | 84.8% |
| 3648998 | 604.3.1.1 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › BAG | 0.53 | 33.0 | 3.62e-01 | 82.0% | 75.6% |
| None | — | 0.53 | 45.0 | 4.00e-01 | 94.6% | 78.8% | |
| 3885691 | 109.4.1.300 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ZER1-like_2nd | 0.53 | 43.0 | 3.75e-01 | 93.7% | 56.1% |
| 3461370 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.53 | 33.0 | 3.74e-01 | 82.9% | 83.5% |
| 4999413 | 1075.5.1.8 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › Polysacc_synt_3 | 0.53 | 39.0 | 2.96e-01 | 95.5% | 31.1% |
| 3309205 | 633.21.1.0 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 | 0.52 | 43.0 | 3.99e-01 | 93.7% | 70.3% |
| 162098 | 106.1.1.3 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like › Bac_globin | 0.51 | 40.0 | 3.88e-01 | 83.8% | 89.0% |
| 3815499 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.51 | 41.0 | 3.83e-01 | 95.5% | 67.9% |
| 3336766 | 2484.1.1.106 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 | 0.51 | 45.0 | 3.35e-01 | 99.1% | 91.3% |
| 3230188 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.51 | 44.0 | 4.07e-01 | 98.2% | 78.5% |
| 3285352 | 601.7.1.47 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › RlaP | 0.51 | 36.0 | 3.62e-01 | 73.9% | 79.1% |