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LacPavin_0818_WC40_scaffold_30711_prodigal-single.1__X__X__00342
Bact-VirLacPavin_0818_WC40_scaffold_30711_prodigal-single.1__X__X__00342
Identity
- Kingdom:
- phage
Quality
89.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-81
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2do3A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 42.0 | 5.19e-01 | 72.2% | 90.2% |
| 1y71A00 | 2.30.30.430 | Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain | 0.73 | 57.0 | 5.08e-01 | 82.3% | 59.6% |
| 3h8zA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 42.0 | 4.66e-01 | 73.4% | 73.4% |
| 1mkmA03 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.62 | 44.0 | 3.38e-01 | 73.4% | 95.9% |
| 4ytlA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 37.0 | 4.28e-01 | 70.9% | 92.0% |
| 2xrnA02 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.59 | 41.0 | 3.15e-01 | 72.2% | 69.5% |
| 4c92B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 40.0 | 3.74e-01 | 73.4% | 56.2% |
| 3goxA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 36.0 | 4.18e-01 | 70.9% | 96.1% |
| 2rqrA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.58 | 40.0 | 3.49e-01 | 72.2% | 47.9% |
| 1ib8A02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.58 | 38.0 | 4.12e-01 | 75.9% | 80.6% |
| 3bjnA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.58 | 40.0 | 3.17e-01 | 72.2% | 80.2% |
| 5tjjB02 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.57 | 40.0 | 3.09e-01 | 72.2% | 92.1% |
| 5w1eA01 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.56 | 41.0 | 3.11e-01 | 75.9% | 76.5% |
| 2e6zA00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 35.0 | 3.81e-01 | 70.9% | 81.4% |
| 6bogA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 33.0 | 3.79e-01 | 70.9% | 90.4% |
| 1q1uA00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.55 | 38.0 | 3.20e-01 | 72.2% | 97.1% |
| 3a2yA00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.54 | 38.0 | 2.94e-01 | 73.4% | 41.1% |
| 3vsfA02 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.53 | 35.0 | 3.03e-01 | 70.9% | 100.0% |
| 2vobB02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.51 | 39.0 | 2.96e-01 | 84.8% | 40.2% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 552 | 4.1.1.61 ↗ | beta barrels › SH3 › SH3 › SH3 › KapB | 0.73 | 57.0 | 5.08e-01 | 82.3% | 59.6% |
| 3834563 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.66 | 47.0 | 4.73e-01 | 74.7% | 77.5% |
| 3806777 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.64 | 45.0 | 4.69e-01 | 74.7% | 84.0% |
| 3288809 | 223.1.1.4 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › IclR | 0.62 | 43.0 | 3.30e-01 | 72.2% | 94.3% |
| 3934655 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 42.0 | 4.13e-01 | 70.9% | 98.8% |
| 3299937 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 44.0 | 4.21e-01 | 74.7% | 88.9% |
| 3925589 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 42.0 | 4.47e-01 | 72.2% | 90.0% |
| 4961441 | 223.1.1.4 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › IclR | 0.60 | 43.0 | 3.29e-01 | 74.7% | 90.2% |
| 4493776 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.60 | 42.0 | 4.46e-01 | 72.2% | 100.0% |
| 4204256 | 223.1.1.4 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › IclR | 0.60 | 42.0 | 3.28e-01 | 74.7% | 95.4% |
| 3251414 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 45.0 | 4.03e-01 | 79.7% | 66.4% |
| 3486329 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 38.0 | 4.05e-01 | 73.4% | 78.5% |
| 3264808 | 4.1.1.237 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 | 0.59 | 38.0 | 3.95e-01 | 73.4% | 72.9% |
| 4890270 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.59 | 35.0 | 3.95e-01 | 70.9% | 85.2% |
| 3675653 | 4.1.1.239 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O | 0.58 | 41.0 | 4.25e-01 | 74.7% | 86.7% |
| 166471 | 223.1.1.4 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › IclR | 0.58 | 40.0 | 3.17e-01 | 72.2% | 80.2% |
| 4069560 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 41.0 | 4.22e-01 | 74.7% | 78.7% |
| 4177200 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.56 | 35.0 | 3.93e-01 | 72.2% | 89.1% |
| 3574454 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.56 | 40.0 | 3.80e-01 | 75.9% | 87.4% |
| 3645395 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.55 | 38.0 | 3.79e-01 | 72.2% | 91.3% |
| 3226684 | 2.3.1.0 ↗ | beta barrels › OB-fold › TIMP-like › TIMP-like | 0.55 | 38.0 | 3.32e-01 | 70.9% | 60.0% |
| 3354076 | 4.1.1.330 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O, SH3-C_UBE2O | 0.53 | 48.0 | 4.05e-01 | 100.0% | 74.6% |
| 3713384 | 844.1.1.0 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain | 0.53 | 45.0 | 3.56e-01 | 100.0% | 70.6% |
| 3882695 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 35.0 | 3.88e-01 | 70.9% | 93.3% |
| 3514522 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.52 | 36.0 | 3.75e-01 | 74.7% | 92.0% |
| 3928711 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 45.0 | 4.45e-01 | 100.0% | 89.4% |
| 3629316 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 45.0 | 4.18e-01 | 96.2% | 80.0% |