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LacPavin_0818_WC40_scaffold_30711_prodigal-single.1__X__X__00412
Bact-VirLacPavin_0818_WC40_scaffold_30711_prodigal-single.1__X__X__00412
Identity
- Kingdom:
- phage
Quality
69.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 24-113
Domain cluster:
rep: OR050627.1__WIC41389.1__MA9V1_125__00125__D658-727
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2vbkA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.55 | 48.0 | 3.02e-01 | 100.0% | 80.6% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3603411 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.55 | 41.0 | 3.53e-01 | 77.8% | 63.7% |
| 2701215 | 1166.1.1.1 ↗ | alpha arrays › Potassium-transporting ATPase KdpC subunit › Potassium-transporting ATPase KdpC subunit › Potassium-transporting ATPase KdpC subunit › KdpC | 0.53 | 43.0 | 3.36e-01 | 86.7% | 99.5% |
| 5040546 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.53 | 46.0 | 3.82e-01 | 94.4% | 58.2% |
| 5048161 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.51 | 43.0 | 3.66e-01 | 91.1% | 61.4% |
| 3737536 | 304.48.1.1 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 | 0.51 | 34.0 | 2.40e-01 | 82.2% | 21.4% |
D2
medium
residues 117-195
D3
medium
residues 196-269