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LacPavin_0818_WC40_scaffold_30711_prodigal-single.1__X__X__00448

Bact-Vir

LacPavin_0818_WC40_scaffold_30711_prodigal-single.1__X__X__00448

Identity

Kingdom:
phage

Quality

85.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-69
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00085.27 best Thioredoxin 39.6 6.30e-10 100.0% 60.2%
CATH (30)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5j7dC00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.96 90.0 7.44e-01 100.0% 60.4%
3tcoA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.96 90.0 7.43e-01 100.0% 60.4%
1nw2A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.96 90.0 7.41e-01 100.0% 61.0%
3gnjA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.96 90.0 7.25e-01 100.0% 57.7%
3hz4A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.95 88.0 6.97e-01 100.0% 53.3%
1thxA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.95 88.0 7.23e-01 100.0% 59.3%
3qdnA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.94 88.0 7.09e-01 100.0% 56.6%
2f9sB00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.94 89.0 6.72e-01 100.0% 64.7%
5ykwA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.93 84.0 6.94e-01 100.0% 58.5%
1w4vA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.93 86.0 7.04e-01 100.0% 58.2%
1gh2A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.93 84.0 6.90e-01 100.0% 57.9%
2diyA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.93 84.0 6.81e-01 100.0% 55.9%
4o32C00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.93 86.0 7.51e-01 100.0% 70.3%
3vfiA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.92 85.0 7.11e-01 100.0% 61.5%
1r26A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.92 82.0 6.64e-01 100.0% 54.9%
6i1cA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.90 82.0 6.75e-01 100.0% 58.3%
2pptA02 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.90 82.0 6.86e-01 100.0% 60.4%
3d6iA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.90 83.0 6.79e-01 100.0% 58.2%
2l6cA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.88 78.0 6.57e-01 100.0% 60.6%
6g62A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.87 80.0 6.45e-01 100.0% 55.7%
1a8lA02 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.87 79.0 6.65e-01 100.0% 64.2%
2b5eA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.86 80.0 6.41e-01 100.0% 56.3%
3erwF00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.85 78.0 6.08e-01 100.0% 69.5%
2lrcA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.82 71.0 6.00e-01 100.0% 58.3%
3emxA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.79 70.0 5.67e-01 100.0% 57.3%
1t4yA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.75 66.0 6.01e-01 100.0% 73.0%
4s39A02 3.30.413.10 Alpha Beta › 2-Layer Sandwich › Sulfite Reductase Hemoprotein; domain 1 › Sulfite Reductase Hemoprotein, domain 1 0.57 48.0 4.13e-01 100.0% 74.1%
1zczA03 3.40.140.20 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › AICAR transformylase, duplication domain 0.53 41.0 3.36e-01 86.2% 65.4%
3l0gB01 3.90.1170.20 Alpha Beta › Alpha-Beta Complex › Aldehyde Oxidoreductase; domain 3 › Quinolinate phosphoribosyl transferase, N-terminal domain 0.50 35.0 2.98e-01 75.4% 100.0%
1lucB00 3.20.20.30 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain 0.50 39.0 2.50e-01 84.6% 76.6%
ECOD (89)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3353585 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.97 91.0 7.19e-01 100.0% 53.8%
5044793 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.97 91.0 7.14e-01 100.0% 53.3%
4947509 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.97 90.0 7.43e-01 100.0% 61.2%
4974710 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.97 91.0 7.36e-01 100.0% 58.2%
3955418 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.96 89.0 7.10e-01 100.0% 54.8%
3342057 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.96 90.0 7.18e-01 100.0% 55.7%
3493272 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.96 90.0 7.29e-01 100.0% 58.2%
5042740 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.96 87.0 6.89e-01 100.0% 52.5%
5050971 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.96 90.0 6.72e-01 100.0% 46.0%
3976551 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.96 90.0 6.72e-01 100.0% 46.0%
4935648 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.96 90.0 6.80e-01 100.0% 47.8%
3942720 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.96 89.0 6.69e-01 100.0% 45.7%
4977058 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.96 89.0 7.26e-01 100.0% 58.2%
5012411 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.96 88.0 7.55e-01 100.0% 66.3%
3655079 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.96 87.0 6.77e-01 100.0% 50.4%
3744713 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.95 87.0 6.85e-01 100.0% 52.5%
3623701 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.95 86.0 7.01e-01 100.0% 56.4%
4457616 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.95 88.0 7.38e-01 100.0% 63.0%
2675336 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.95 88.0 7.12e-01 100.0% 57.3%
5026927 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.95 87.0 7.23e-01 100.0% 60.0%
None 0.95 89.0 7.23e-01 100.0% 58.7%
4562702 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.95 89.0 7.46e-01 100.0% 64.0%
5016280 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.95 83.0 7.49e-01 100.0% 70.6%
3468511 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.95 65.0 7.09e-01 72.3% 83.6%
3782017 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.95 88.0 7.17e-01 100.0% 58.2%
4023876 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.95 88.0 7.05e-01 100.0% 55.7%
3408670 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.95 87.0 6.94e-01 100.0% 54.8%
3174106 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.94 88.0 6.96e-01 100.0% 53.3%
3300296 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.94 88.0 7.02e-01 100.0% 55.7%
None 0.94 87.0 7.25e-01 100.0% 61.0%
3576841 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.94 87.0 6.80e-01 100.0% 51.2%
4935617 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.94 87.0 6.73e-01 100.0% 50.0%
4980345 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.94 87.0 6.86e-01 100.0% 53.3%
4988132 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.94 87.0 7.19e-01 100.0% 61.0%
3958546 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.93 65.0 6.80e-01 72.3% 78.3%
3280146 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.93 86.0 6.57e-01 100.0% 47.4%
3399463 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.93 86.0 6.57e-01 100.0% 47.4%
3511622 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.93 86.0 7.19e-01 100.0% 61.5%
163953 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.93 84.0 6.45e-01 100.0% 47.7%
4951497 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.93 84.0 7.55e-01 100.0% 72.9%
4940347 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.93 85.0 6.86e-01 100.0% 55.7%
3574325 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.92 83.0 7.14e-01 100.0% 65.3%
3469975 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.92 86.0 7.11e-01 100.0% 61.0%
4030824 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.92 83.0 6.75e-01 100.0% 55.3%
3245065 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.92 83.0 6.71e-01 100.0% 54.8%
4988978 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.92 84.0 6.70e-01 100.0% 53.3%
4015675 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.92 87.0 6.74e-01 100.0% 53.6%
3407386 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.92 83.0 6.90e-01 100.0% 60.0%
3424280 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.91 84.0 7.15e-01 100.0% 64.0%
3588898 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.91 81.0 6.68e-01 100.0% 56.4%
5044792 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.91 82.0 6.87e-01 100.0% 60.0%
3591875 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.91 82.0 7.25e-01 100.0% 70.0%
3512115 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.91 74.0 7.43e-01 87.7% 86.2%
5083321 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.90 83.0 7.09e-01 100.0% 66.0%
4375244 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.90 81.0 6.64e-01 100.0% 57.3%
4945621 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.89 83.0 6.95e-01 100.0% 62.9%
3671153 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.89 68.0 6.00e-01 83.1% 57.8%
5007526 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.89 81.0 7.32e-01 100.0% 75.3%
3594661 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.89 84.0 6.16e-01 100.0% 50.0%
4025650 2485.1.1.11 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Phosducin 0.89 83.0 6.69e-01 100.0% 61.7%
3701712 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.89 83.0 6.44e-01 100.0% 57.7%
3656721 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.88 82.0 7.73e-01 98.5% 93.3%
4946644 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.88 78.0 6.62e-01 100.0% 60.6%
2524015 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.88 77.0 6.89e-01 100.0% 69.7%
3502426 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.88 82.0 7.39e-01 100.0% 76.5%
4033875 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.87 76.0 6.58e-01 100.0% 63.3%
3223389 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.87 80.0 6.60e-01 100.0% 62.7%
3996858 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.86 73.0 7.34e-01 89.2% 90.8%
4996700 2485.1.1.38 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_3 0.86 75.0 6.52e-01 100.0% 64.2%
3669436 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.86 80.0 7.24e-01 100.0% 78.8%
3657629 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.86 77.0 6.38e-01 100.0% 57.8%
3396640 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.86 79.0 6.09e-01 100.0% 48.1%
3995127 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.85 76.0 7.25e-01 96.9% 93.3%
3504833 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.84 73.0 6.98e-01 95.4% 85.3%
4973539 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.84 73.0 6.16e-01 100.0% 59.2%
3970771 3009.1.1.0 alpha arrays › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like 0.84 75.0 5.26e-01 100.0% 92.8%
3588467 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.83 75.0 6.34e-01 100.0% 61.9%
4950460 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.83 73.0 6.84e-01 100.0% 78.8%
4629137 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.83 74.0 6.51e-01 100.0% 68.4%
4013126 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.82 73.0 6.50e-01 100.0% 70.0%
3615117 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.81 74.0 5.48e-01 100.0% 65.2%
5020721 2485.1.1.27 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › KaiB 0.80 72.0 6.13e-01 100.0% 61.9%
4080548 223.1.1.176 a+b three layers › Profilin-like › sensor domains › sensor domains › KaiB 0.79 69.0 5.67e-01 100.0% 54.2%
4014289 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.78 63.0 4.65e-01 100.0% 35.0%
3358578 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.78 69.0 6.35e-01 100.0% 87.1%
4985895 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.74 61.0 5.97e-01 93.8% 85.7%
3175469 2485.1.1.87 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › UBX7_N 0.72 63.0 5.33e-01 100.0% 65.5%
3588855 2485.1.1.80 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › DUF6568 0.63 51.0 5.04e-01 90.8% 92.9%
1434556 320.2.1.1 a+b two layers › R3H domain-like › Ribosomal protein S8, N-terminal domain › Ribosomal protein S8, N-terminal domain › Ribosomal_S8 0.54 32.0 3.25e-01 73.8% 56.1%