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LacPavin_0818_WC40_scaffold_30711_prodigal-single.1__X__X__00499
Bact-VirLacPavin_0818_WC40_scaffold_30711_prodigal-single.1__X__X__00499
Identity
- Kingdom:
- phage
Quality
60.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 555-637
D2
high
residues 988-1157
Domain cluster:
rep: OK041467.1__UDY80235.1__PAE2_10__00010__D34-181
CATH (49)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4indA02 | 2.60.120.1310 | Mainly Beta › Sandwich › Jelly Rolls › | 0.79 | 49.0 | 5.98e-01 | 100.0% | 94.6% |
| 8hhvA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.75 | 47.0 | 5.48e-01 | 98.8% | 86.9% |
| 2wq4A01 | 2.60.120.760 | Mainly Beta › Sandwich › Jelly Rolls › | 0.74 | 53.0 | 5.95e-01 | 100.0% | 95.3% |
| 2df7A02 | 2.60.120.660 | Mainly Beta › Sandwich › Jelly Rolls › icosahedral virus | 0.70 | 53.0 | 5.78e-01 | 100.0% | 94.3% |
| 4oumA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.69 | 49.0 | 5.53e-01 | 100.0% | 93.9% |
| 4d7yA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.68 | 48.0 | 5.42e-01 | 100.0% | 94.7% |
| 5t5lA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.67 | 63.0 | 5.61e-01 | 100.0% | 96.5% |
| 4ht1T00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.67 | 48.0 | 5.38e-01 | 100.0% | 95.4% |
| 1nlqE00 | 2.60.120.340 | Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain | 0.66 | 39.0 | 4.93e-01 | 98.8% | 100.0% |
| 4p02B03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.65 | 49.0 | 5.28e-01 | 100.0% | 92.3% |
| 2q1mA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.64 | 42.0 | 4.94e-01 | 100.0% | 95.7% |
| 1yq5A00 | 2.60.120.670 | Mainly Beta › Sandwich › Jelly Rolls › Minor capsid protein. | 0.64 | 49.0 | 5.30e-01 | 100.0% | 94.4% |
| 2zewB00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.63 | 49.0 | 5.29e-01 | 100.0% | 93.9% |
| 4devD01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.63 | 43.0 | 4.97e-01 | 100.0% | 95.2% |
| 4qhzA00 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.62 | 57.0 | 5.10e-01 | 98.8% | 83.8% |
| 4mxwD00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 46.0 | 5.14e-01 | 100.0% | 97.0% |
| 2w3jA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.61 | 45.0 | 4.94e-01 | 100.0% | 92.7% |
| 2durB01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 57.0 | 5.12e-01 | 100.0% | 88.6% |
| 6mkbA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 51.0 | 5.31e-01 | 100.0% | 94.4% |
| 5xnrA02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 56.0 | 4.93e-01 | 100.0% | 99.6% |
| 2q1fA01 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.60 | 50.0 | 5.05e-01 | 100.0% | 88.0% |
| 1uaiA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 55.0 | 5.04e-01 | 100.0% | 96.0% |
| 2cwsA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 55.0 | 5.01e-01 | 100.0% | 96.5% |
| 7t7zA01 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.58 | 48.0 | 5.10e-01 | 98.8% | 98.6% |
| 2okxA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.58 | 43.0 | 4.41e-01 | 93.5% | 78.6% |
| 3azwA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 54.0 | 4.82e-01 | 100.0% | 84.8% |
| 2c4xA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.58 | 49.0 | 5.15e-01 | 99.4% | 98.1% |
| 3ammA00 | 2.60.120.180 | Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain | 0.56 | 52.0 | 4.52e-01 | 100.0% | 94.9% |
| 5z6pA01 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.56 | 52.0 | 5.11e-01 | 100.0% | 95.5% |
| 2c9aA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 48.0 | 5.00e-01 | 100.0% | 95.7% |
| 4d0qA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.56 | 48.0 | 4.98e-01 | 100.0% | 95.7% |
| 4bq2D01 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.56 | 51.0 | 4.98e-01 | 100.0% | 95.8% |
| 5l73A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 48.0 | 4.82e-01 | 100.0% | 89.1% |
| 3w5nA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.56 | 42.0 | 4.23e-01 | 93.5% | 78.4% |
| 2jemA00 | 2.60.120.180 | Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain | 0.55 | 51.0 | 4.59e-01 | 100.0% | 94.8% |
| 2zxqA04 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 47.0 | 4.86e-01 | 100.0% | 96.2% |
| 2vg9A00 | 2.60.120.180 | Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain | 0.54 | 50.0 | 4.64e-01 | 100.0% | 83.9% |
| 1pz7A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 48.0 | 4.71e-01 | 97.1% | 88.3% |
| 3v0aB03 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 49.0 | 4.65e-01 | 100.0% | 89.8% |
| 5dl8A00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.53 | 40.0 | 3.04e-01 | 76.5% | 59.8% |
| 3w57A00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.53 | 35.0 | 4.13e-01 | 77.1% | 99.1% |
| 4akrA02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.53 | 35.0 | 3.70e-01 | 81.8% | 74.8% |
| 3jtyB01 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.52 | 39.0 | 3.02e-01 | 76.5% | 62.3% |
| 6fokB01 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.51 | 45.0 | 3.04e-01 | 94.1% | 96.4% |
| 1m06G00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 46.0 | 4.48e-01 | 100.0% | 89.3% |
| 3m1hD00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 47.0 | 4.71e-01 | 100.0% | 96.6% |
| 1a6cA02 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 43.0 | 4.37e-01 | 100.0% | 91.5% |
| 2porA00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.51 | 39.0 | 3.25e-01 | 81.2% | 63.8% |
| 5kkuD00 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.50 | 38.0 | 3.20e-01 | 78.2% | 90.5% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2723157 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.74 | 48.0 | 5.25e-01 | 98.8% | 78.6% |
| 4416110 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.73 | 44.0 | 5.16e-01 | 100.0% | 85.0% |
| 3821106 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.67 | 46.0 | 4.69e-01 | 100.0% | 70.6% |
| 2417794 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.65 | 37.0 | 4.20e-01 | 100.0% | 73.6% |
| 3184237 | 10.9.1.0 ↗ | beta sandwiches › jelly-roll › C-terminal domain of mullusc hemocyanin › C-terminal domain of mullusc hemocyanin | 0.62 | 37.0 | 4.14e-01 | 75.9% | 74.6% |
| 3257863 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.62 | 48.0 | 5.27e-01 | 100.0% | 97.1% |
| 3607773 | 10.1.1.56 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › TS_C | 0.62 | 58.0 | 5.13e-01 | 100.0% | 82.6% |
| 1318667 | 10.1.1.21 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › 3keto-disac_hyd | 0.61 | 56.0 | 5.01e-01 | 100.0% | 81.7% |
| 3794738 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.61 | 55.0 | 5.23e-01 | 98.8% | 84.1% |
| 1095 | 10.1.1.27 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Alginate_lyase2 | 0.60 | 55.0 | 5.04e-01 | 100.0% | 96.0% |
| 3782878 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.59 | 45.0 | 3.54e-01 | 80.0% | 68.7% |
| 3980865 | 5084.1.1.11 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Phenol_MetA_deg | 0.58 | 48.0 | 4.11e-01 | 87.1% | 98.1% |
| 3968722 | 5084.6.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Tsx-like channel › Tsx-like channel | 0.57 | 43.0 | 3.72e-01 | 77.1% | 98.8% |
| 4341819 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.53 | 44.0 | 3.32e-01 | 87.1% | 97.5% |
| 3769937 | 10.1.1.1 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_1 | 0.53 | 48.0 | 4.46e-01 | 97.6% | 86.6% |
| 3259597 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.53 | 47.0 | 4.80e-01 | 100.0% | 94.7% |
| 4015352 | 10.9.1.0 ↗ | beta sandwiches › jelly-roll › C-terminal domain of mullusc hemocyanin › C-terminal domain of mullusc hemocyanin | 0.53 | 34.0 | 3.78e-01 | 75.9% | 82.3% |
| 3787513 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.53 | 35.0 | 4.15e-01 | 79.4% | 99.1% |
| 3980921 | 5084.5.1.18 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › BCSC_C | 0.53 | 41.0 | 3.28e-01 | 82.4% | 92.1% |
| 3979319 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.52 | 45.0 | 3.76e-01 | 91.8% | 95.2% |
| 3964572 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.51 | 45.0 | 3.71e-01 | 92.4% | 89.8% |
| 3839997 | 5084.5.4.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › Toluene_X | 0.51 | 45.0 | 3.38e-01 | 95.3% | 99.8% |
| 3741350 | 11.2.1.41 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2_TCB1 | 0.51 | 37.0 | 4.07e-01 | 99.4% | 93.3% |
| 888 | 5084.5.1.11 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_4 | 0.51 | 39.0 | 3.25e-01 | 81.2% | 63.8% |
| 4162922 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.51 | 43.0 | 3.55e-01 | 91.8% | 94.5% |
| 4399548 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.50 | 37.0 | 2.90e-01 | 76.5% | 42.1% |
| 3969607 | 5084.1.1.11 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Phenol_MetA_deg | 0.50 | 41.0 | 3.31e-01 | 84.7% | 96.2% |
| 3621194 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.50 | 35.0 | 3.95e-01 | 77.6% | 93.8% |
D3
medium
residues 886-981