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LacPavin_0818_WC40_scaffold_354720_prodigal-single.1__X__X__00160

Bact-Vir

LacPavin_0818_WC40_scaffold_354720_prodigal-single.1__X__X__00160

Identity

Kingdom:
phage

Quality

81.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-78
PDB
Domain cluster: representative
CATH (26)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1sf9A02 2.30.30.340 Mainly Beta › Roll › SH3 type barrels. › Hypothetical protein YfhH like domains 0.69 46.0 5.32e-01 84.0% 96.3%
3udcA02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.67 42.0 4.93e-01 77.3% 96.0%
5ajiB02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.66 43.0 4.91e-01 77.3% 98.0%
5ycqA00 2.30.30.390 Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain 0.63 44.0 4.44e-01 80.0% 71.4%
2y9fA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.63 47.0 3.85e-01 81.3% 98.0%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 46.0 4.71e-01 94.7% 82.2%
1kjzA03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.61 44.0 4.17e-01 88.0% 63.0%
2jmbA00 2.40.128.290 Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein family Atu4866 0.60 43.0 4.27e-01 76.0% 93.7%
8eq1A01 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.58 38.0 3.62e-01 82.7% 56.8%
2jiiA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.58 45.0 3.92e-01 81.3% 84.5%
2kdsA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.58 41.0 3.93e-01 86.7% 65.1%
4zgnB00 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.58 46.0 4.10e-01 85.3% 63.1%
6su1D01 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.57 38.0 3.58e-01 82.7% 56.7%
4b6mB00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.57 42.0 4.14e-01 78.7% 91.1%
3nrlA00 2.40.10.390 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.56 46.0 4.81e-01 89.3% 100.0%
7oo1A01 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.56 37.0 3.68e-01 82.7% 64.9%
7r6yA01 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.56 37.0 3.46e-01 82.7% 54.3%
3qeeB00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.55 42.0 2.83e-01 82.7% 46.2%
1txqA00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.55 43.0 4.42e-01 86.7% 98.6%
3jbtA06 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 41.0 2.77e-01 84.0% 38.5%
6oqrA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.52 42.0 3.94e-01 86.7% 73.3%
3gqbA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.51 41.0 4.21e-01 86.7% 94.4%
3dasA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.51 40.0 2.75e-01 92.0% 82.9%
2dk7A00 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.51 35.0 3.55e-01 73.3% 74.0%
4gc1A01 2.90.10.10 Mainly Beta › Orthogonal Prism › Agglutinin, subunit A › Bulb-type lectin domain 0.51 38.0 3.50e-01 84.0% 72.1%
2fdbN00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.50 42.0 3.40e-01 93.3% 89.9%
ECOD (45)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3264806 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 48.0 5.67e-01 80.0% 100.0%
4429179 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.73 43.0 5.31e-01 76.0% 97.8%
3382832 4.1.1.302 beta barrels › SH3 › SH3 › SH3 › tSH3-B_UBE2O 0.73 44.0 3.34e-01 81.3% 25.6%
3598284 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 45.0 5.17e-01 78.7% 87.3%
4305196 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.71 45.0 5.32e-01 84.0% 98.0%
5044373 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 49.0 5.37e-01 81.3% 90.0%
4963446 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 52.0 5.53e-01 85.3% 89.2%
5063537 4.1.1.13 beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.70 45.0 5.00e-01 82.7% 83.3%
4280256 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.70 42.0 4.99e-01 85.3% 92.0%
3436022 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.69 46.0 5.29e-01 89.3% 94.5%
4930861 4.1.1.13 beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.69 48.0 5.05e-01 81.3% 83.1%
3945489 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 44.0 5.14e-01 77.3% 98.0%
4583465 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.67 43.0 5.05e-01 85.3% 98.0%
3675341 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.67 45.0 5.08e-01 84.0% 94.5%
4550511 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.67 40.0 4.84e-01 82.7% 100.0%
4534931 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.67 42.0 4.24e-01 78.7% 64.0%
4258307 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.66 50.0 3.36e-01 81.3% 31.8%
3904034 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 50.0 5.51e-01 81.3% 100.0%
4585317 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.66 44.0 4.95e-01 89.3% 94.5%
3291045 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.65 48.0 4.28e-01 100.0% 55.2%
4668201 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.65 42.0 4.95e-01 85.3% 100.0%
4974669 4.1.1.458 beta barrels › SH3 › SH3 › SH3 › DUF2098 0.65 43.0 4.11e-01 86.7% 57.8%
3708283 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 48.0 4.58e-01 78.7% 89.4%
4962256 101.1.2.937 alpha arrays › HTH › HTH › winged helix domain › PF25943 0.64 49.0 4.29e-01 81.3% 76.4%
5004050 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 44.0 4.57e-01 82.7% 77.1%
None 0.63 42.0 2.75e-01 82.7% 15.3%
3928760 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.63 48.0 3.08e-01 81.3% 24.2%
5017637 4.1.1.458 beta barrels › SH3 › SH3 › SH3 › DUF2098 0.62 42.0 4.73e-01 86.7% 94.5%
5048696 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 48.0 3.64e-01 88.0% 35.9%
4025294 4.1.1.60 beta barrels › SH3 › SH3 › SH3 › YccV-like 0.60 45.0 4.20e-01 78.7% 81.1%
5016556 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 45.0 4.28e-01 81.3% 91.1%
4014881 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 45.0 4.93e-01 80.0% 100.0%
3040112 375.1.1.22 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DNA_RNApol_7kD 0.60 28.0 3.36e-01 70.7% 64.0%
4029263 4.1.1.18 beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.59 46.0 4.01e-01 85.3% 66.7%
4369736 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.59 36.0 4.15e-01 76.0% 100.0%
3982999 4.1.1.60 beta barrels › SH3 › SH3 › SH3 › YccV-like 0.59 44.0 4.06e-01 81.3% 74.0%
4024048 375.1.1.22 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DNA_RNApol_7kD 0.58 28.0 3.43e-01 73.3% 70.8%
3715537 4.1.1.41 beta barrels › SH3 › SH3 › SH3 › NOT2_3_5_C 0.57 40.0 3.10e-01 100.0% 32.5%
3805018 5.1.3.6 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 0.55 47.0 3.14e-01 100.0% 94.6%
3504860 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.54 40.0 4.18e-01 78.7% 95.7%
3631797 5.1.4.6 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40 0.54 39.0 2.65e-01 78.7% 44.9%
4235076 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.53 46.0 4.58e-01 97.3% 95.0%
3351082 5.1.5.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.52 38.0 2.99e-01 81.3% 55.0%
3172227 7558.1.1.0 a/b three-layered sandwiches › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase 0.50 44.0 4.09e-01 96.0% 96.8%
3299426 5.1.3.152 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Str_synth, SSL_N 0.50 37.0 2.52e-01 81.3% 40.3%
D2 high residues 96-145
PDB
Domain cluster: representative
CATH (59)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4gniA03 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.75 56.0 4.63e-01 80.0% 58.6%
2ltrA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.69 60.0 4.75e-01 100.0% 55.2%
2l2mA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.66 57.0 5.16e-01 100.0% 91.4%
2l6mA00 3.30.160.400 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.65 53.0 4.41e-01 100.0% 75.2%
1vq8N00 3.30.420.100 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.64 51.0 3.61e-01 96.0% 35.5%
3htxA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.64 54.0 4.67e-01 94.0% 88.2%
1e8cA02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.64 53.0 3.45e-01 100.0% 20.6%
1p9rA01 3.30.450.90 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.63 45.0 3.57e-01 78.0% 38.7%
1ilyA00 3.30.420.100 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.63 49.0 4.15e-01 90.0% 97.8%
2vgnA02 3.30.420.60 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 0.62 47.0 3.60e-01 84.0% 42.5%
1gqyB02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.62 52.0 3.47e-01 100.0% 23.0%
1fgsA01 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.62 52.0 3.28e-01 100.0% 17.6%
2khxA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.62 51.0 4.55e-01 100.0% 84.8%
2dt8A02 3.30.1180.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › 0.61 51.0 3.91e-01 100.0% 52.3%
2wdtC02 3.30.1490.420 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ubiquitin carboxyl-terminal hydrolase, domain 2 0.60 48.0 4.07e-01 100.0% 58.4%
3nm6B00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.60 51.0 3.35e-01 98.0% 99.6%
4c12A02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.60 50.0 3.33e-01 100.0% 23.9%
3nyiA02 3.30.1180.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › 0.60 48.0 3.69e-01 98.0% 49.6%
2pm6D01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.60 44.0 2.82e-01 82.0% 25.0%
1k8kC00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 44.0 2.72e-01 82.0% 18.9%
3bpqD00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.59 42.0 3.58e-01 74.0% 43.0%
8f5dA05 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.59 48.0 3.22e-01 100.0% 22.2%
6qk7A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 45.0 2.81e-01 90.0% 25.0%
1pzxA03 3.30.1180.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › 0.57 47.0 3.67e-01 98.0% 45.9%
2a1vA00 3.90.1150.30 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.57 47.0 3.58e-01 100.0% 85.5%
3fm2A00 3.40.1570.10 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains 0.57 47.0 3.58e-01 100.0% 66.2%
2qxlB01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.56 42.0 3.28e-01 88.0% 42.5%
2nn5A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.56 46.0 3.25e-01 96.0% 43.9%
6j7xC01 3.30.450.50 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin domain 0.56 46.0 3.46e-01 96.0% 36.4%
5jozB02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 39.0 2.67e-01 74.0% 32.7%
2p4bB02 3.30.200.100 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › MucB/RseB, C-terminal domain 0.56 47.0 3.81e-01 98.0% 49.0%
2qmiA02 2.40.128.210 Mainly Beta › Beta Barrel › Lipocalin › Pab87 octamerisation domain 0.56 43.0 3.64e-01 94.0% 71.0%
2f51A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.56 44.0 3.47e-01 84.0% 79.3%
3agkA02 3.30.420.60 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 0.56 42.0 3.21e-01 82.0% 46.8%
6phxA01 2.70.98.60 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis 0.55 40.0 2.60e-01 92.0% 13.8%
2j3tC00 3.30.450.70 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.55 42.0 3.18e-01 94.0% 31.9%
2lstA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.55 43.0 3.34e-01 92.0% 83.1%
1h8mA00 3.30.450.50 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin domain 0.55 44.0 3.33e-01 96.0% 36.4%
1vr8A00 3.40.1000.20 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › TM1622-like 0.55 45.0 3.46e-01 100.0% 94.1%
3zl8A02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.55 43.0 2.97e-01 100.0% 22.6%
2xa7M01 3.30.450.60 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.55 41.0 3.26e-01 90.0% 36.7%
1wgvA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 38.0 2.97e-01 76.0% 59.7%
1l3aA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.54 42.0 3.06e-01 94.0% 63.3%
1v1pB02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.54 42.0 3.80e-01 92.0% 89.2%
4ecnA02 2.60.40.3540 Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4458 0.54 41.0 3.27e-01 90.0% 79.5%
3n7cA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 45.0 3.64e-01 100.0% 70.4%
1txdA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 40.0 3.17e-01 84.0% 55.4%
1itvA00 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.53 37.0 2.54e-01 72.0% 18.5%
1ifqB00 3.30.450.50 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin domain 0.53 40.0 3.17e-01 92.0% 36.7%
3hi0A02 3.30.420.150 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Exopolyphosphatase. Domain 2 0.52 43.0 3.05e-01 100.0% 76.0%
2ec4A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.52 41.0 2.96e-01 94.0% 73.7%
4ckmB00 2.170.210.20 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain 0.51 45.0 3.24e-01 100.0% 47.2%
3wxmB02 3.30.420.60 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 0.51 39.0 3.05e-01 86.0% 50.8%
3u4yA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 39.0 2.52e-01 94.0% 21.6%
7t8tA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 38.0 3.04e-01 92.0% 63.4%
2ivnA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.51 45.0 3.17e-01 100.0% 67.5%
5x6vF00 3.30.450.190 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.51 39.0 3.19e-01 94.0% 40.7%
4my0A02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.51 42.0 3.17e-01 100.0% 81.4%
1aqcB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.50 40.0 3.20e-01 96.0% 78.7%
ECOD (81)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3678841 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.72 63.0 5.33e-01 100.0% 70.6%
5047657 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.70 59.0 5.79e-01 98.0% 90.9%
3299579 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.67 60.0 5.36e-01 100.0% 75.7%
3299580 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.67 57.0 5.29e-01 98.0% 86.2%
4944397 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.66 54.0 5.44e-01 94.0% 94.0%
3669022 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.66 59.0 4.77e-01 100.0% 66.3%
3319893 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.66 59.0 4.67e-01 100.0% 55.0%
4944466 301.13.1.0 a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain 0.65 56.0 4.20e-01 98.0% 52.0%
3653274 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.65 59.0 4.87e-01 100.0% 68.2%
3327575 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.65 58.0 4.61e-01 100.0% 63.0%
3236988 331.2.1.0 a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain 0.64 46.0 4.01e-01 78.0% 100.0%
3965886 252.2.1.0 a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.64 46.0 4.82e-01 80.0% 91.1%
5045959 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.63 50.0 3.94e-01 90.0% 50.0%
3705938 5.1.2.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.63 43.0 3.36e-01 74.0% 52.5%
4251813 2004.1.1.159 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M 0.63 52.0 3.57e-01 100.0% 25.0%
103012 2004.1.1.159 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M 0.62 53.0 3.31e-01 100.0% 16.9%
4532721 2004.1.1.159 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M 0.62 52.0 3.52e-01 100.0% 27.0%
3481288 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.62 54.0 4.15e-01 100.0% 61.7%
3334492 252.2.1.0 a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.62 48.0 4.20e-01 88.0% 77.5%
4944904 301.13.1.0 a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain 0.62 52.0 3.91e-01 100.0% 48.9%
4944239 301.13.1.0 a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain 0.61 50.0 3.85e-01 98.0% 51.5%
3827127 252.2.1.0 a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.61 45.0 3.82e-01 86.0% 80.0%
9789 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.61 51.0 3.19e-01 100.0% 17.1%
3728783 223.2.1.15 a+b three layers › Profilin-like › profilin-like › profilin-like › Longin 0.61 47.0 3.49e-01 88.0% 37.1%
169853 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.60 42.0 3.59e-01 74.0% 43.5%
3331331 252.2.1.1 a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 0.60 46.0 3.80e-01 88.0% 72.0%
4182088 2004.1.1.159 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M 0.60 50.0 3.38e-01 100.0% 23.8%
4959351 4312.1.1.0 a+b two layers › RelE-like › RelE-like › RelE-like 0.60 43.0 3.78e-01 78.0% 47.5%
4251276 2004.1.1.159 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M 0.60 49.0 3.20e-01 100.0% 19.2%
1937228 301.13.1.1 a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain › DegV 0.60 48.0 3.70e-01 98.0% 50.4%
4944129 301.13.1.0 a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain 0.60 49.0 3.75e-01 98.0% 50.0%
3882038 223.2.1.3 a+b three layers › Profilin-like › profilin-like › profilin-like › Clat_adaptor_s 0.60 47.0 3.44e-01 94.0% 29.7%
4888953 5.1.5.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.59 43.0 2.62e-01 82.0% 17.1%
3213706 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.59 42.0 2.85e-01 80.0% 18.6%
1937542 301.13.1.1 a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain › DegV 0.59 47.0 3.74e-01 100.0% 50.0%
5033346 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.59 44.0 3.45e-01 86.0% 48.0%
3740896 5.1.4.16 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A 0.59 45.0 2.84e-01 90.0% 26.0%
3164102 252.2.1.0 a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.59 47.0 4.89e-01 98.0% 100.0%
4027687 330.3.1.0 a+b two layers › dsRBD-like › Peptidyl-tRNA hydrolase domain-like › Peptidyl-tRNA hydrolase domain-like 0.58 46.0 4.54e-01 88.0% 96.4%
3825338 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.58 46.0 3.53e-01 94.0% 37.8%
4075794 2004.1.1.159 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M 0.58 48.0 3.24e-01 100.0% 23.3%
4028013 252.2.1.1 a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 0.58 48.0 4.22e-01 92.0% 73.3%
3487523 319.1.1.3 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS 0.58 40.0 3.38e-01 74.0% 61.1%
5071935 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.58 47.0 3.54e-01 92.0% 38.5%
3501515 391.1.2.9 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › Fn1_2 0.57 39.0 3.58e-01 72.0% 72.9%
4979823 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.57 44.0 3.68e-01 92.0% 51.0%
3587958 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 45.0 3.85e-01 92.0% 71.1%
3977017 223.1.1.57 a+b three layers › Profilin-like › sensor domains › sensor domains › CSS-motif 0.57 46.0 3.03e-01 94.0% 49.8%
3600598 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.57 45.0 3.37e-01 94.0% 36.4%
4977778 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.56 44.0 3.55e-01 94.0% 44.3%
1005444 295.2.1.1 a+b two layers › ssDNA-binding transcriptional regulator domain-like › Outer surface protein E › Outer surface protein E › OspE 0.56 44.0 3.38e-01 100.0% 71.5%
4390303 5.1.3.238 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › PF29568 0.56 46.0 2.65e-01 94.0% 12.3%
3909529 2485.1.1.55 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › FAF1 0.55 44.0 3.03e-01 88.0% 51.8%
4533094 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.55 40.0 3.19e-01 86.0% 53.8%
4027162 5.1.11.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed 0.55 43.0 2.61e-01 92.0% 19.8%
4945516 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.55 43.0 3.27e-01 96.0% 33.1%
5074455 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.54 43.0 3.54e-01 96.0% 46.4%
3283507 9.4.1.0 beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains 0.54 39.0 3.38e-01 82.0% 46.7%
4029445 252.2.1.1 a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 0.54 47.0 4.62e-01 100.0% 89.1%
4030681 252.2.1.1 a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 0.54 48.0 4.36e-01 100.0% 75.4%
4126985 301.13.1.1 a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain › DegV 0.54 44.0 3.48e-01 100.0% 53.2%
3392308 220.1.1.7 beta barrels › PH domain-like › PH domain-like › PH domain-like › IRS 0.54 39.0 3.34e-01 84.0% 61.1%
4029439 252.2.1.0 a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.54 47.0 4.26e-01 100.0% 73.9%
3924696 2485.1.1.55 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › FAF1 0.54 40.0 3.08e-01 88.0% 72.1%
3614140 223.2.1.10 a+b three layers › Profilin-like › profilin-like › profilin-like › Gtr1_RagA 0.54 42.0 3.12e-01 94.0% 31.0%
3970247 9.11.1.0 beta barrels › Lipocalins/Streptavidin › YdhA-like › YdhA-like 0.54 41.0 3.35e-01 98.0% 40.9%
3787001 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 41.0 3.01e-01 92.0% 28.5%
4414431 2002.1.1.23 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › IMPDH 0.53 47.0 2.86e-01 100.0% 77.8%
4952060 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.53 37.0 3.66e-01 82.0% 71.7%
3739712 223.2.1.10 a+b three layers › Profilin-like › profilin-like › profilin-like › Gtr1_RagA 0.53 41.0 3.20e-01 94.0% 36.9%
3739664 247.1.1.38 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › CPSF73-100_C 0.52 40.0 3.57e-01 82.0% 58.6%
3996686 220.1.1.47 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_16 0.52 42.0 2.92e-01 88.0% 28.7%
4964178 319.1.1.29 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › DUF7127 0.52 37.0 3.36e-01 78.0% 68.5%
4056117 4.8.1.5 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR 0.52 38.0 3.62e-01 86.0% 84.6%
3895602 5.1.4.102 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_3 0.51 40.0 2.61e-01 94.0% 21.7%
4027686 252.2.1.0 a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.51 44.0 4.35e-01 100.0% 92.7%
4973804 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 35.0 3.26e-01 78.0% 74.7%
4946587 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 38.0 3.07e-01 94.0% 36.9%
4976643 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.51 39.0 3.10e-01 94.0% 40.8%
3945385 219.1.1.6 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 0.51 42.0 2.97e-01 100.0% 43.3%
4203238 220.1.1.217 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH, GRAM 0.50 42.0 2.84e-01 98.0% 20.0%