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LacPavin_0818_WC40_scaffold_354720_prodigal-single.1__X__X__00203
Bact-VirLacPavin_0818_WC40_scaffold_354720_prodigal-single.1__X__X__00203
Identity
- Kingdom:
- phage
Quality
87.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-81
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7l0jB01 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.72 | 46.0 | 4.45e-01 | 100.0% | 57.3% |
| 1wlfA02 | 3.10.330.10 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.63 | 41.0 | 4.12e-01 | 100.0% | 65.0% |
| 3gtyX02 | 3.10.50.30 | Alpha Beta › Roll › Chitinase A; domain 3 › Transcription elongation factor, GreA/GreB, C-terminal domain | 0.61 | 45.0 | 4.47e-01 | 100.0% | 73.8% |
| 7y6oA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 35.0 | 3.32e-01 | 100.0% | 50.5% |
| 3nrkA02 | 3.10.50.40 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.56 | 49.0 | 4.44e-01 | 100.0% | 93.6% |
| 1sq2N00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 36.0 | 3.23e-01 | 100.0% | 48.2% |
| 3pv7A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 37.0 | 3.47e-01 | 100.0% | 59.6% |
| 4eq3A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 35.0 | 3.29e-01 | 100.0% | 54.1% |
| 6lnhB01 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.52 | 40.0 | 2.95e-01 | 84.6% | 77.4% |
| 2qyzA01 | 3.30.1490.160 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ctc02137 like domains | 0.51 | 29.0 | 3.37e-01 | 100.0% | 83.0% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5072403 | 375.5.1.0 ↗ | few secondary structure elements › Rubredoxin-like › NOB1 zinc finger-like › NOB1 zinc finger-like | 0.64 | 33.0 | 4.25e-01 | 100.0% | 88.9% |
| 3640318 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.61 | 33.0 | 4.20e-01 | 100.0% | 93.3% |
| 3701144 | 284.1.1.0 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like | 0.59 | 44.0 | 4.22e-01 | 100.0% | 70.0% |
| 3897847 | 216.1.1.2 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › Autophagy_act_C | 0.57 | 41.0 | 3.32e-01 | 79.5% | 93.5% |
| 3311079 | 284.1.1.8 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › Rotamase_3 | 0.56 | 47.0 | 4.33e-01 | 100.0% | 78.2% |
| 3964206 | 284.1.1.7 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › Rotamase_2 | 0.55 | 48.0 | 4.60e-01 | 100.0% | 91.1% |
| 4074427 | 284.1.1.3 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › Rotamase | 0.55 | 48.0 | 4.39e-01 | 100.0% | 91.4% |
| 3432801 | 216.1.1.2 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › Autophagy_act_C | 0.53 | 40.0 | 3.17e-01 | 84.6% | 91.9% |
| 4339408 | 284.1.1.3 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › Rotamase | 0.53 | 44.0 | 4.25e-01 | 100.0% | 93.7% |
| 3620613 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.51 | 29.0 | 3.58e-01 | 97.4% | 97.8% |
| 3224367 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.51 | 36.0 | 2.29e-01 | 100.0% | 16.8% |
D2
medium
residues 82-139
Domain cluster:
representative