←Back to structures
LacPavin_0818_WC40_scaffold_354720_prodigal-single.1__X__X__00224
Bact-VirLacPavin_0818_WC40_scaffold_354720_prodigal-single.1__X__X__00224
Identity
- Kingdom:
- phage
Quality
83.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-101
Domain cluster:
representative
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2do3A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 40.0 | 5.22e-01 | 72.3% | 96.1% |
| 2e70A00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.74 | 40.0 | 4.52e-01 | 73.4% | 69.0% |
| 2mysA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.72 | 37.0 | 4.99e-01 | 74.5% | 97.9% |
| 3p8bB02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 41.0 | 5.02e-01 | 74.5% | 88.7% |
| 7afrX02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.70 | 40.0 | 4.84e-01 | 73.4% | 88.3% |
| 2xk0A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 39.0 | 4.49e-01 | 73.4% | 75.4% |
| 1x6bA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.68 | 45.0 | 5.38e-01 | 76.6% | 100.0% |
| 1lckA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.68 | 42.0 | 5.19e-01 | 76.6% | 100.0% |
| 2cudA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.68 | 43.0 | 4.72e-01 | 75.5% | 77.2% |
| 7cfdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 38.0 | 4.31e-01 | 71.3% | 72.6% |
| 4fw1A02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.67 | 37.0 | 4.63e-01 | 73.4% | 92.6% |
| 2v1qA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.67 | 42.0 | 5.16e-01 | 73.4% | 100.0% |
| 4iimA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.66 | 39.0 | 4.91e-01 | 72.3% | 98.2% |
| 4ii1A02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 37.0 | 4.70e-01 | 71.3% | 94.6% |
| 6e55A01 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.65 | 45.0 | 5.00e-01 | 71.3% | 91.9% |
| 6o5cA02 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.65 | 47.0 | 5.22e-01 | 75.5% | 96.1% |
| 1zuuA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.63 | 38.0 | 4.69e-01 | 74.5% | 100.0% |
| 2rqrA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.63 | 41.0 | 3.84e-01 | 78.7% | 52.9% |
| 3e1sA04 | 2.30.30.940 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 44.0 | 5.09e-01 | 73.4% | 98.6% |
| 2kxcA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.61 | 42.0 | 4.88e-01 | 77.7% | 100.0% |
| 4f88102 | 3.90.1720.60 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › | 0.61 | 45.0 | 3.48e-01 | 78.7% | 60.1% |
| 1k1zA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.60 | 43.0 | 4.71e-01 | 75.5% | 89.7% |
| 1pqzA01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.59 | 44.0 | 3.86e-01 | 95.7% | 53.3% |
| 2ky9A01 | 2.30.30.1130 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 40.0 | 4.66e-01 | 70.2% | 100.0% |
| 4c5eC02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 40.0 | 4.00e-01 | 70.2% | 86.5% |
| 2evrA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.58 | 39.0 | 4.35e-01 | 71.3% | 89.2% |
| 1awoA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.58 | 35.0 | 4.26e-01 | 76.6% | 100.0% |
| 1ts9A00 | 2.30.30.210 | Mainly Beta › Roll › SH3 type barrels. › Ribonuclease P/MRP, subunit p29 | 0.57 | 42.0 | 4.20e-01 | 77.7% | 85.7% |
| 4gyiA02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.57 | 39.0 | 3.90e-01 | 95.7% | 68.4% |
| 4g54A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.53 | 43.0 | 3.91e-01 | 87.2% | 82.4% |
| 3k30A03 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 39.0 | 3.48e-01 | 78.7% | 97.7% |
| 2gs5A01 | 3.40.1740.10 | Alpha Beta › 3-Layer(aba) Sandwich › VC0467-like › VC0467-like | 0.52 | 42.0 | 3.44e-01 | 90.4% | 89.9% |
| 4g59B00 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.51 | 39.0 | 3.33e-01 | 84.0% | 100.0% |
| 6l6jA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.50 | 40.0 | 3.54e-01 | 85.1% | 97.1% |
ECOD (70)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4990212 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.81 | 42.0 | 5.44e-01 | 73.4% | 87.3% |
| 4946165 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.77 | 39.0 | 5.06e-01 | 72.3% | 85.5% |
| 3486328 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.77 | 40.0 | 4.94e-01 | 72.3% | 80.0% |
| 4980648 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.77 | 43.0 | 4.96e-01 | 79.8% | 75.7% |
| 4992872 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 41.0 | 5.34e-01 | 76.6% | 92.7% |
| 4975150 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 44.0 | 5.42e-01 | 83.0% | 93.3% |
| 4015071 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 44.0 | 5.06e-01 | 78.7% | 80.0% |
| 5025079 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 41.0 | 5.23e-01 | 77.7% | 94.5% |
| 3570399 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 45.0 | 5.37e-01 | 75.5% | 89.2% |
| 3740753 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.74 | 40.0 | 4.67e-01 | 71.3% | 75.4% |
| 5058671 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 39.0 | 5.08e-01 | 78.7% | 90.9% |
| 4629022 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.73 | 40.0 | 4.62e-01 | 75.5% | 72.9% |
| 4011604 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.73 | 45.0 | 5.05e-01 | 78.7% | 78.7% |
| 4890270 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.72 | 39.0 | 4.92e-01 | 70.2% | 90.7% |
| 3492757 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 46.0 | 5.23e-01 | 75.5% | 85.7% |
| 4952887 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 41.0 | 5.18e-01 | 83.0% | 96.4% |
| 3398093 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.71 | 38.0 | 4.67e-01 | 72.3% | 81.7% |
| 4029093 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 40.0 | 3.35e-01 | 76.6% | 33.5% |
| 5033075 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 38.0 | 4.98e-01 | 79.8% | 92.7% |
| 3938389 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.70 | 40.0 | 4.20e-01 | 71.3% | 62.4% |
| 5017214 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 40.0 | 5.10e-01 | 83.0% | 98.2% |
| 3765274 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 43.0 | 4.41e-01 | 71.3% | 64.4% |
| 3881123 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.70 | 38.0 | 4.05e-01 | 71.3% | 60.0% |
| 3765126 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.69 | 41.0 | 5.13e-01 | 73.4% | 100.0% |
| 3363448 | 4.1.1.140 ↗ | beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom | 0.69 | 46.0 | 4.89e-01 | 73.4% | 75.3% |
| 3414063 | 4.1.1.233 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N | 0.69 | 39.0 | 4.94e-01 | 73.4% | 96.4% |
| 3474715 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 40.0 | 4.72e-01 | 78.7% | 84.6% |
| 3261235 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.68 | 41.0 | 4.35e-01 | 71.3% | 67.1% |
| 4000280 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 38.0 | 4.85e-01 | 77.7% | 94.5% |
| 158943 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.68 | 46.0 | 4.94e-01 | 77.7% | 82.3% |
| 3517728 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.68 | 38.0 | 4.33e-01 | 71.3% | 74.3% |
| 3840679 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.67 | 38.0 | 3.84e-01 | 71.3% | 54.7% |
| 4157433 | 4.7.1.1 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 | 0.67 | 46.0 | 5.19e-01 | 71.3% | 94.6% |
| 3765289 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.67 | 38.0 | 3.96e-01 | 71.3% | 58.9% |
| 3883159 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.67 | 38.0 | 3.87e-01 | 71.3% | 57.8% |
| 3910433 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 38.0 | 4.56e-01 | 71.3% | 83.1% |
| 4002896 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.67 | 38.0 | 3.88e-01 | 71.3% | 57.8% |
| 3671986 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.66 | 41.0 | 4.68e-01 | 84.0% | 82.9% |
| 3576128 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 46.0 | 4.28e-01 | 71.3% | 78.3% |
| 3169607 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.66 | 46.0 | 5.08e-01 | 73.4% | 89.3% |
| 3469800 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.66 | 40.0 | 4.31e-01 | 71.3% | 71.2% |
| 4524466 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.66 | 38.0 | 4.39e-01 | 71.3% | 77.1% |
| 3479037 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 41.0 | 4.49e-01 | 74.5% | 75.0% |
| 3389169 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.66 | 40.0 | 4.25e-01 | 71.3% | 68.2% |
| 2725406 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.65 | 43.0 | 4.60e-01 | 79.8% | 76.8% |
| 3684908 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.65 | 43.0 | 4.80e-01 | 71.3% | 85.3% |
| 3920666 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.65 | 38.0 | 3.91e-01 | 71.3% | 61.1% |
| 3816455 | 4.1.1.140 ↗ | beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom | 0.65 | 46.0 | 4.14e-01 | 73.4% | 98.4% |
| None | — | 0.64 | 46.0 | 2.94e-01 | 73.4% | 24.8% | |
| 4625654 | 4.1.1.445 ↗ | beta barrels › SH3 › SH3 › SH3 › Spore_GerQ | 0.64 | 43.0 | 4.72e-01 | 76.6% | 85.3% |
| 3845425 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.64 | 38.0 | 3.92e-01 | 71.3% | 62.2% |
| 3923813 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 39.0 | 4.66e-01 | 70.2% | 90.8% |
| 3482646 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 43.0 | 3.32e-01 | 80.9% | 33.0% |
| 3881117 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.63 | 44.0 | 4.32e-01 | 71.3% | 89.0% |
| 3425872 | 4.1.1.140 ↗ | beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom | 0.62 | 45.0 | 4.65e-01 | 75.5% | 86.7% |
| 3693741 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 43.0 | 4.91e-01 | 73.4% | 97.1% |
| 3221094 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 45.0 | 4.18e-01 | 75.5% | 71.3% |
| 2726885 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 44.0 | 4.10e-01 | 73.4% | 99.1% |
| 4962256 | 101.1.2.937 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF25943 | 0.61 | 43.0 | 4.08e-01 | 72.3% | 71.8% |
| 3300226 | 4.1.1.140 ↗ | beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom | 0.61 | 44.0 | 4.79e-01 | 75.5% | 97.5% |
| 490 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.61 | 42.0 | 4.65e-01 | 75.5% | 90.5% |
| 3712782 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 37.0 | 4.03e-01 | 78.7% | 72.5% |
| 3498280 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 50.0 | 4.53e-01 | 91.5% | 93.8% |
| 3240406 | 4.1.1.347 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5, KOW6_SPT5 | 0.59 | 49.0 | 4.58e-01 | 88.3% | 78.3% |
| 3492982 | 4.1.1.12 ↗ | beta barrels › SH3 › SH3 › SH3 › PWWP | 0.59 | 51.0 | 4.53e-01 | 95.7% | 92.6% |
| 3710007 | 4.1.1.372 ↗ | beta barrels › SH3 › SH3 › SH3 › PF30207 | 0.58 | 43.0 | 3.92e-01 | 76.6% | 64.2% |
| 3240407 | 4.1.1.237 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 | 0.58 | 39.0 | 4.42e-01 | 75.5% | 92.9% |
| 3405627 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 42.0 | 4.23e-01 | 91.5% | 80.0% |
| 4942017 | 5090.1.1.0 ↗ | beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains | 0.53 | 38.0 | 3.54e-01 | 74.5% | 94.8% |
| 3931905 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 43.0 | 3.99e-01 | 87.2% | 93.0% |