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LacPavin_0818_WC40_scaffold_354720_prodigal-single.1__X__X__00319
Bact-VirLacPavin_0818_WC40_scaffold_354720_prodigal-single.1__X__X__00319
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-75
Domain cluster:
rep: S2_018_000_R2_scaffold_9_prodigal-single.1__X__X__00147__D4-72
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7wrgB01 | 3.40.850.10 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain | 0.61 | 53.0 | 3.54e-01 | 100.0% | 26.6% |
| 3r2gA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.61 | 45.0 | 2.95e-01 | 78.4% | 87.9% |
| 2fdbN00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.59 | 51.0 | 4.11e-01 | 98.6% | 86.5% |
| 1khbA03 | 3.90.228.20 | Alpha Beta › Alpha-Beta Complex › Phosphoenolpyruvate Carboxykinase; domain 3 › | 0.58 | 49.0 | 3.41e-01 | 95.9% | 63.9% |
| 1dqgA00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.58 | 50.0 | 4.14e-01 | 97.3% | 90.3% |
| 8badA01 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.58 | 50.0 | 4.09e-01 | 100.0% | 99.3% |
| 3vsfA02 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.56 | 47.0 | 3.97e-01 | 100.0% | 99.3% |
| 1sr4C00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.51 | 45.0 | 3.57e-01 | 100.0% | 88.3% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3274170 | 206.1.1.16 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › IucA_IucC,FhuF | 0.67 | 49.0 | 2.95e-01 | 78.4% | 31.9% |
| 3488329 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.65 | 59.0 | 4.86e-01 | 100.0% | 95.4% |
| 3704338 | 2004.1.1.26 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin | 0.65 | 56.0 | 4.22e-01 | 100.0% | 42.5% |
| 3891555 | 2004.1.1.26 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin | 0.64 | 57.0 | 4.05e-01 | 100.0% | 37.3% |
| 3810819 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.64 | 56.0 | 3.50e-01 | 100.0% | 19.3% |
| 3641401 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.62 | 53.0 | 3.34e-01 | 100.0% | 20.7% |
| 3459959 | 192.8.1.454 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › Kinesin | 0.60 | 51.0 | 3.31e-01 | 100.0% | 22.2% |
| 4030190 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.60 | 52.0 | 4.39e-01 | 100.0% | 85.0% |
| 3595978 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.60 | 52.0 | 3.28e-01 | 100.0% | 18.9% |
| 4044667 | 4076.2.1.2 ↗ | a+b two layers › L9 N-domain-like › MbtH-like › MbtH-like › PF27096 | 0.59 | 41.0 | 4.11e-01 | 89.2% | 70.7% |
| 3691111 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.56 | 48.0 | 3.74e-01 | 98.6% | 84.4% |
| 3279149 | 386.1.1.65 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › DUF1059 | 0.55 | 41.0 | 4.44e-01 | 100.0% | 98.3% |
| 5032777 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.53 | 45.0 | 4.18e-01 | 100.0% | 100.0% |
| 3781272 | 10.32.1.204 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Rax2_2 | 0.52 | 43.0 | 3.30e-01 | 100.0% | 59.0% |
| 4512685 | 4076.2.1.0 ↗ | a+b two layers › L9 N-domain-like › MbtH-like › MbtH-like | 0.51 | 40.0 | 3.57e-01 | 90.5% | 67.0% |
| 3639558 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.51 | 38.0 | 4.15e-01 | 100.0% | 96.7% |
| 5015560 | 10.28.1.1 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in Zinc finger protein ZPR1 › Jelly-roll domain in Zinc finger protein ZPR1 › jr-ZPR1 | 0.50 | 45.0 | 3.79e-01 | 100.0% | 69.6% |