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LacPavin_0818_WC40_scaffold_354720_prodigal-single.1__X__X__00484
Bact-VirLacPavin_0818_WC40_scaffold_354720_prodigal-single.1__X__X__00484
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 15-118
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2l2mA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.57 | 34.0 | 4.12e-01 | 85.6% | 90.0% |
| 7o06C01 | 3.30.1470.10 | Alpha Beta › 2-Layer Sandwich › Photosystem 1 Reaction Centre Subunit Ii; Chain: D; › Photosystem I PsaD, reaction center subunit II | 0.53 | 34.0 | 3.64e-01 | 99.0% | 74.7% |
| 1b7yB05 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.51 | 42.0 | 3.45e-01 | 88.5% | 94.2% |
| 5kiqA02 | 3.10.20.890 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.51 | 31.0 | 3.59e-01 | 86.5% | 86.1% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4012540 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.63 | 39.0 | 4.47e-01 | 78.8% | 85.3% |
| 3925738 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.60 | 43.0 | 4.30e-01 | 100.0% | 70.9% |
| 5083024 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.59 | 47.0 | 3.20e-01 | 88.5% | 85.8% |
| 3708854 | 64.1.1.1 ↗ | beta meanders › WW domain-like › WW domain › WW domain › WW | 0.58 | 27.0 | 3.81e-01 | 92.3% | 94.0% |
| 3613670 | 64.1.1.14 ↗ | beta meanders › WW domain-like › WW domain › WW domain › PF30846 | 0.56 | 35.0 | 3.88e-01 | 99.0% | 81.2% |
| None | — | 0.55 | 47.0 | 3.25e-01 | 98.1% | 66.1% | |
| 3443030 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.54 | 38.0 | 4.25e-01 | 78.8% | 93.8% |
| 3710545 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.54 | 36.0 | 4.05e-01 | 89.4% | 96.0% |
| 5048392 | 7579.1.1.42 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Hydrolase_4 | 0.51 | 37.0 | 2.74e-01 | 76.0% | 86.3% |
| 4539032 | 314.1.1.11 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA_synthFbeta | 0.51 | 41.0 | 3.47e-01 | 87.5% | 93.1% |