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LacPavin_0818_WC40_scaffold_354720_prodigal-single.1__X__X__00566

Bact-Vir

LacPavin_0818_WC40_scaffold_354720_prodigal-single.1__X__X__00566

Identity

Kingdom:
phage

Quality

71.6 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-79
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1knzA02 3.30.70.1610 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 32.0 3.69e-01 87.2% 76.9%
2gukA00 3.30.2190.10 Alpha Beta › 2-Layer Sandwich › PG1857-like › PG1857-like 0.56 36.0 3.26e-01 100.0% 45.9%
3mcpA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.53 38.0 2.81e-01 79.5% 89.2%
1xexB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 37.0 2.95e-01 76.9% 78.3%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4975506 304.24.1.0 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.56 32.0 3.29e-01 76.9% 58.7%
3604748 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.51 37.0 2.79e-01 79.5% 59.5%