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LacPavin_0818_WC40_scaffold_407201_prodigal-single.1__X__X__00010
Bact-VirLacPavin_0818_WC40_scaffold_407201_prodigal-single.1__X__X__00010
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 3-17_60-115
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1a22A00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.60 | 43.0 | 3.29e-01 | 77.5% | 90.0% |
| 2p4vA01 | 1.10.287.180 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Transcription elongation factor, GreA/GreB, N-terminal domain | 0.60 | 40.0 | 3.92e-01 | 80.3% | 63.2% |
| 6gy8A01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.57 | 49.0 | 3.22e-01 | 98.6% | 81.0% |
| 1zeeA01 | 1.20.58.600 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 44.0 | 3.75e-01 | 84.5% | 62.7% |
| 2x2vA00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.57 | 42.0 | 4.28e-01 | 77.5% | 94.1% |
| 1x4tA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.56 | 38.0 | 4.14e-01 | 77.5% | 87.9% |
| 4l0rB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 40.0 | 3.99e-01 | 78.9% | 75.3% |
| 2qqyA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.55 | 45.0 | 3.71e-01 | 93.0% | 84.8% |
| 1urfA00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.54 | 39.0 | 3.75e-01 | 77.5% | 79.0% |
| 2xubA05 | 6.10.140.1450 | Special › Helix non-globular › Helix Hairpins › | 0.54 | 38.0 | 3.55e-01 | 77.5% | 75.0% |
| 2y39A00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.53 | 44.0 | 3.98e-01 | 100.0% | 100.0% |
| 3t0yA01 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.52 | 38.0 | 3.98e-01 | 95.8% | 86.4% |
| 3q9oA02 | 3.90.1350.10 | Alpha Beta › Alpha-Beta Complex › Exotoxin A, middle domain › Exotoxin A, middle domain | 0.51 | 41.0 | 3.26e-01 | 93.0% | 49.1% |
| 1hciA03 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 38.0 | 3.29e-01 | 83.1% | 83.3% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3645152 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.68 | 56.0 | 5.68e-01 | 95.8% | 92.9% |
| 3520270 | 101.35.1.5 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH1 | 0.58 | 41.0 | 3.65e-01 | 77.5% | 50.5% |
| 3808989 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.55 | 41.0 | 3.74e-01 | 81.7% | 77.0% |
| 3969538 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.54 | 37.0 | 4.05e-01 | 73.2% | 92.7% |
| 3721924 | 4156.1.1.2 ↗ | alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › HA2_N,HA2_C | 0.53 | 38.0 | 2.79e-01 | 77.5% | 94.3% |
| 3445040 | 3826.1.1.53 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Rx_N | 0.52 | 40.0 | 3.87e-01 | 85.9% | 87.1% |
| 4941224 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 44.0 | 4.30e-01 | 98.6% | 83.7% |
D2
medium
residues 24-56
Domain cluster:
representative
CATH (54)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2vf9A00 | 3.30.380.10 | Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein | 0.74 | 59.0 | 4.09e-01 | 100.0% | 26.7% |
| 2qrdE01 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.72 | 49.0 | 3.14e-01 | 75.8% | 13.9% |
| 4fvmA03 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.71 | 57.0 | 3.50e-01 | 100.0% | 14.1% |
| 3cxbA02 | 3.30.390.70 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Salmonella typhimurium protein | 0.70 | 54.0 | 3.85e-01 | 87.9% | 27.4% |
| 4q52A00 | 2.60.40.3910 | Mainly Beta › Sandwich › Immunoglobulin-like › Inclusion body protein | 0.70 | 55.0 | 3.49e-01 | 81.8% | 49.1% |
| 1aq3A00 | 3.30.380.10 | Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein | 0.68 | 56.0 | 3.87e-01 | 100.0% | 33.3% |
| 1a6aB01 | 3.10.320.10 | Alpha Beta › Roll › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 | 0.68 | 45.0 | 3.24e-01 | 100.0% | 22.5% |
| 3ks7A02 | 2.60.120.230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.68 | 52.0 | 3.43e-01 | 100.0% | 79.3% |
| 1lkfA00 | 2.70.240.10 | Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA | 0.65 | 49.0 | 2.96e-01 | 93.9% | 74.0% |
| 1a8mA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.64 | 48.0 | 3.33e-01 | 100.0% | 25.0% |
| 4damC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.64 | 57.0 | 4.11e-01 | 100.0% | 36.0% |
| 1t6eX01 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.64 | 44.0 | 2.88e-01 | 75.8% | 61.5% |
| 5egjA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.64 | 51.0 | 3.36e-01 | 97.0% | 25.1% |
| 1s55A00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.63 | 46.0 | 3.24e-01 | 100.0% | 66.0% |
| 4tw1B00 | 2.70.240.10 | Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA | 0.63 | 48.0 | 2.88e-01 | 90.9% | 73.4% |
| 1p1hB01 | 3.30.2360.10 | Alpha Beta › 2-Layer Sandwich › Glyceraldehyde-3-phosphate dehydrogenase-like fold › Glyceraldehyde-3-phosphate dehydrogenase-like domain | 0.63 | 48.0 | 3.19e-01 | 100.0% | 22.2% |
| 1ilvA00 | 3.40.1210.10 | Alpha Beta › 3-Layer(aba) Sandwich › Stationary-phase Survival Protein Sure Homolog; Chain: A, › Survival protein SurE-like phosphatase/nucleotidase | 0.62 | 46.0 | 2.91e-01 | 100.0% | 14.3% |
| 6kghA02 | 3.30.450.330 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.62 | 48.0 | 3.23e-01 | 100.0% | 23.4% |
| 7sxqA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.62 | 46.0 | 2.81e-01 | 90.9% | 12.1% |
| 4l8nA03 | 3.30.160.670 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.62 | 45.0 | 3.11e-01 | 100.0% | 19.5% |
| 3hm2A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.61 | 46.0 | 3.12e-01 | 100.0% | 19.9% |
| 1mu5A01 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.61 | 42.0 | 2.69e-01 | 81.8% | 12.9% |
| 4ienA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.60 | 46.0 | 3.14e-01 | 97.0% | 26.6% |
| 1ya5T01 | 2.20.160.10 | Mainly Beta › Single Sheet › titin filament fold › titin domain like | 0.59 | 44.0 | 3.58e-01 | 100.0% | 39.3% |
| 2y8yA02 | 3.30.70.1210 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Crispr-associated protein; domain 2 | 0.59 | 44.0 | 3.12e-01 | 72.7% | 60.9% |
| 2re9A01 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 44.0 | 3.05e-01 | 97.0% | 27.4% |
| 2qgyB01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.59 | 50.0 | 3.33e-01 | 100.0% | 24.8% |
| 4q28A00 | 3.30.160.780 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.59 | 48.0 | 3.45e-01 | 97.0% | 53.6% |
| 2fa1A00 | 3.40.1410.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like | 0.59 | 43.0 | 2.87e-01 | 87.9% | 17.0% |
| 4fumA01 | 2.20.230.10 | Mainly Beta › Single Sheet › Resuscitation-promoting factor rpfb fold › Resuscitation-promoting factor rpfb. | 0.58 | 46.0 | 3.83e-01 | 100.0% | 44.6% |
| 4obmA00 | 3.40.630.190 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › LCP protein | 0.58 | 42.0 | 2.62e-01 | 90.9% | 12.0% |
| 1av4A03 | 2.70.98.20 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain | 0.57 | 46.0 | 2.64e-01 | 100.0% | 38.7% |
| 4wksC02 | 2.30.120.10 | Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region | 0.57 | 40.0 | 3.23e-01 | 72.7% | 45.3% |
| 3mb5A02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.57 | 46.0 | 2.98e-01 | 100.0% | 25.9% |
| 1kfiA04 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.57 | 47.0 | 3.10e-01 | 90.9% | 68.8% |
| 5o46A00 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 42.0 | 3.18e-01 | 97.0% | 28.9% |
| 1hq0A00 | 3.60.100.10 | Alpha Beta › 4-Layer Sandwich › Cytotoxic necrotizing factor 1 (CNF1) › Cytotoxic necrotizing factor, Rho-activating domain | 0.57 | 43.0 | 2.59e-01 | 90.9% | 10.2% |
| 2ch9A01 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 41.0 | 3.04e-01 | 90.9% | 27.4% |
| 3eaaA00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.57 | 46.0 | 2.97e-01 | 97.0% | 32.7% |
| 2yxdA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 39.0 | 2.74e-01 | 100.0% | 21.2% |
| 1tnrA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 43.0 | 3.11e-01 | 100.0% | 23.6% |
| 3e1uA00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.54 | 42.0 | 2.82e-01 | 97.0% | 17.9% |
| 1l3iA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 43.0 | 2.89e-01 | 100.0% | 18.9% |
| 5e1qB01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.53 | 41.0 | 2.51e-01 | 100.0% | 34.9% |
| 1ciiA02 | 3.30.305.10 | Alpha Beta › 2-Layer Sandwich › Colicin Ia; domain 2 › Colicin Ia; domain 2 | 0.53 | 43.0 | 3.17e-01 | 100.0% | 34.7% |
| 2gfoA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.53 | 43.0 | 2.51e-01 | 100.0% | 54.6% |
| 6gdxA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 45.0 | 3.15e-01 | 100.0% | 68.2% |
| 1rvkA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.53 | 40.0 | 2.89e-01 | 90.9% | 31.9% |
| 5aj3Q00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 41.0 | 2.95e-01 | 78.8% | 65.1% |
| 5jtwA06 | 6.20.50.160 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.52 | 38.0 | 3.26e-01 | 90.9% | 45.2% |
| 4rx6D00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 43.0 | 3.12e-01 | 100.0% | 96.3% |
| 7xlqD01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.52 | 35.0 | 2.62e-01 | 81.8% | 20.2% |
| 5h9fJ00 | 3.30.70.2660 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 36.0 | 2.35e-01 | 100.0% | 75.3% |
| 2psmC01 | 2.20.28.230 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.50 | 34.0 | 3.33e-01 | 97.0% | 73.1% |
ECOD (66)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3584211 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.86 | 70.0 | 4.62e-01 | 100.0% | 22.8% |
| 3200725 | 10.32.1.252 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF7371 | 0.80 | 64.0 | 3.96e-01 | 100.0% | 16.7% |
| 4244412 | 11.1.1.929 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF28202 | 0.79 | 66.0 | 4.29e-01 | 100.0% | 61.3% |
| 5070602 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.79 | 63.0 | 4.15e-01 | 100.0% | 22.1% |
| 3960795 | 706.2.1.0 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G | 0.78 | 62.0 | 5.72e-01 | 93.9% | 68.9% |
| 4238279 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.76 | 62.0 | 4.33e-01 | 97.0% | 36.5% |
| 3190573 | 706.2.1.0 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G | 0.76 | 63.0 | 5.43e-01 | 100.0% | 60.0% |
| 3929202 | 2484.5.1.3 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH_2 | 0.75 | 58.0 | 4.23e-01 | 93.9% | 29.5% |
| 3561019 | 2484.5.1.3 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH_2 | 0.75 | 59.0 | 4.03e-01 | 93.9% | 25.4% |
| 5044368 | 327.17.1.9 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › S-adenosylmethionine synthetase › S-adenosylmethionine synthetase › OsmC | 0.74 | 60.0 | 4.05e-01 | 100.0% | 23.6% |
| 4996356 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.73 | 60.0 | 4.05e-01 | 100.0% | 24.3% |
| 3316930 | 67.1.1.0 ↗ | beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain | 0.73 | 54.0 | 4.46e-01 | 84.8% | 43.1% |
| 5074340 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.71 | 59.0 | 3.97e-01 | 100.0% | 23.6% |
| 3210524 | 73.1.1.0 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain | 0.70 | 57.0 | 4.46e-01 | 97.0% | 82.5% |
| 5075107 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.69 | 50.0 | 3.39e-01 | 100.0% | 19.3% |
| 3170704 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.69 | 56.0 | 3.17e-01 | 100.0% | 8.0% |
| 3578502 | 2006.1.6.39 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › Mat89Bb | 0.69 | 56.0 | 3.31e-01 | 93.9% | 49.8% |
| 2755357 | 232.1.1.3 ↗ | a+b duplicates or obligate multimers › Pentein › Pentein › Pentein › PAD | 0.68 | 52.0 | 3.02e-01 | 100.0% | 9.2% |
| 3462646 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.68 | 51.0 | 3.81e-01 | 90.9% | 30.0% |
| 4887778 | 232.1.1.3 ↗ | a+b duplicates or obligate multimers › Pentein › Pentein › Pentein › PAD | 0.68 | 53.0 | 3.17e-01 | 100.0% | 11.8% |
| 3754362 | 3426.1.1.0 ↗ | beta meanders › Telethonin › Telethonin › Telethonin | 0.67 | 54.0 | 4.53e-01 | 100.0% | 53.3% |
| 3307357 | 7575.1.1.0 ↗ | a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like | 0.66 | 46.0 | 4.66e-01 | 81.8% | 77.1% |
| 3401054 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.65 | 47.0 | 3.89e-01 | 100.0% | 38.8% |
| 5010745 | 3781.2.1.1 ↗ | a+b two layers › Ribosomal protein L11/L12e N-terminal domain-like › ssDNA-binding protein ThermoDBP-related › ssDNA-binding protein ThermoDBP-related › ThermoDBP-RP_arch | 0.64 | 48.0 | 3.55e-01 | 97.0% | 27.5% |
| 4938611 | 295.1.1.53 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › DUF3467 | 0.64 | 47.0 | 3.87e-01 | 81.8% | 42.2% |
| 3663353 | 222.1.1.20 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › MFE-2_hydrat-2_N | 0.63 | 51.0 | 3.28e-01 | 100.0% | 17.8% |
| 5029369 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 49.0 | 3.90e-01 | 97.0% | 65.9% |
| 5857 | 512.1.1.1 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st | 0.62 | 51.0 | 3.89e-01 | 100.0% | 45.9% |
| 3285688 | 512.1.1.1 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st | 0.61 | 49.0 | 3.68e-01 | 100.0% | 42.1% |
| 3505969 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 44.0 | 3.02e-01 | 100.0% | 19.3% |
| 5054385 | 512.1.1.1 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st | 0.61 | 51.0 | 4.07e-01 | 100.0% | 61.4% |
| 3746356 | 10.2.1.5 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide | 0.60 | 46.0 | 2.90e-01 | 100.0% | 47.8% |
| 5054289 | 512.1.1.0 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) | 0.60 | 38.0 | 3.13e-01 | 97.0% | 27.7% |
| 4942971 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.60 | 47.0 | 3.17e-01 | 100.0% | 73.2% |
| 3958972 | 512.1.1.0 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) | 0.60 | 41.0 | 3.08e-01 | 100.0% | 24.2% |
| 3926977 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.59 | 47.0 | 3.36e-01 | 100.0% | 26.0% |
| 5074002 | 512.1.1.1 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st | 0.59 | 40.0 | 3.07e-01 | 90.9% | 24.2% |
| 4449302 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 38.0 | 2.67e-01 | 100.0% | 17.1% |
| 3497884 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.59 | 40.0 | 2.98e-01 | 84.8% | 22.9% |
| 5009735 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.59 | 43.0 | 2.75e-01 | 87.9% | 13.5% |
| 4947504 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.59 | 47.0 | 2.93e-01 | 100.0% | 71.4% |
| 4944655 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.59 | 49.0 | 3.32e-01 | 93.9% | 60.7% |
| 3212196 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.59 | 46.0 | 3.33e-01 | 100.0% | 28.7% |
| 4971337 | 512.1.1.1 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st | 0.58 | 47.0 | 3.65e-01 | 100.0% | 45.9% |
| 5022054 | 512.1.1.1 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st | 0.58 | 46.0 | 3.43e-01 | 100.0% | 40.0% |
| 4934996 | 512.1.1.1 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st | 0.57 | 40.0 | 3.02e-01 | 90.9% | 24.2% |
| 5011691 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 42.0 | 3.11e-01 | 97.0% | 100.0% |
| 4336917 | 2003.1.5.179 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PF30636 | 0.56 | 44.0 | 2.80e-01 | 97.0% | 17.4% |
| 2431038 | 11.1.1.14 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Glyco_hydro_2 | 0.56 | 41.0 | 4.14e-01 | 100.0% | 97.3% |
| 5013602 | 512.1.1.1 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st | 0.55 | 45.0 | 3.40e-01 | 100.0% | 45.6% |
| 3640508 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.55 | 41.0 | 2.52e-01 | 93.9% | 11.1% |
| 3827633 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.55 | 45.0 | 3.15e-01 | 97.0% | 32.3% |
| 5066049 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.55 | 45.0 | 2.73e-01 | 100.0% | 70.0% |
| 3576134 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 41.0 | 3.81e-01 | 90.9% | 64.0% |
| 3516949 | 221.3.1.0 ↗ | a+b two layers › beta-Grasp › Immunoglobulin-binding domains › Immunoglobulin-binding domains | 0.55 | 47.0 | 4.41e-01 | 97.0% | 80.0% |
| 4033381 | 3218.1.1.1 ↗ | a+b duplicates or obligate multimers › small terminase oligomerization domain › small terminase oligomerization domain › small terminase oligomerization domain › Terminase_2 | 0.55 | 38.0 | 3.08e-01 | 100.0% | 30.0% |
| 4961364 | 2003.1.5.179 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PF30636 | 0.55 | 38.0 | 2.67e-01 | 100.0% | 18.9% |
| 3993483 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.53 | 41.0 | 3.11e-01 | 93.9% | 83.8% |
| 3265117 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 35.0 | 2.79e-01 | 93.9% | 27.0% |
| 5075687 | 512.1.1.1 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st | 0.53 | 42.0 | 3.29e-01 | 100.0% | 47.1% |
| 4941422 | 328.1.1.0 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like | 0.52 | 43.0 | 2.82e-01 | 100.0% | 20.6% |
| 5067017 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.52 | 40.0 | 2.64e-01 | 100.0% | 89.0% |
| 3324151 | 231.1.1.2 ↗ | a+b two layers › MocoBD/DmpA-related › MocoBD/DmpA-related › Molybdenum cofactor-binding domain › MoCoBD_2 | 0.51 | 38.0 | 2.46e-01 | 87.9% | 13.2% |
| 4029363 | 304.20.1.2 ↗ | a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › Nrap_D3 | 0.51 | 35.0 | 2.54e-01 | 100.0% | 20.0% |
| 3852918 | 4290.1.1.8 ↗ | alpha duplicates or obligate multimers › HP0242-like › HP0242-like › HP0242-like › Dynactin_p62 | 0.50 | 37.0 | 3.11e-01 | 81.8% | 91.3% |
| 3472858 | 145.1.1.32 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box_4 | 0.50 | 35.0 | 3.14e-01 | 97.0% | 43.8% |