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LacPavin_0818_WC40_scaffold_407201_prodigal-single.1__X__X__00182
Bact-VirLacPavin_0818_WC40_scaffold_407201_prodigal-single.1__X__X__00182
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-123
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3be3A00 | 2.30.30.320 | Mainly Beta › Roll › SH3 type barrels. › DUF1653-like domain | 0.79 | 36.0 | 4.33e-01 | 100.0% | 64.5% |
| 2ckkA02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 34.0 | 4.60e-01 | 100.0% | 87.7% |
| 5ycqA00 | 2.30.30.390 | Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain | 0.67 | 31.0 | 3.67e-01 | 100.0% | 62.3% |
| 4iupA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 32.0 | 3.84e-01 | 98.2% | 83.3% |
| 4b6mB00 | 2.30.30.190 | Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain | 0.55 | 33.0 | 3.84e-01 | 100.0% | 84.8% |
| 2gu1A01 | 3.10.450.350 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 33.0 | 3.70e-01 | 93.8% | 84.1% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3530890 | 2004.1.1.402 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CABIT | 0.76 | 48.0 | 5.38e-01 | 100.0% | 80.7% |
| 4643742 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 38.0 | 4.27e-01 | 100.0% | 72.9% |
| 3491987 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 35.0 | 4.58e-01 | 84.8% | 100.0% |
| 4932514 | 4.23.1.2 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 | 0.61 | 38.0 | 3.80e-01 | 100.0% | 59.2% |
| 3848483 | 4.1.1.248 ↗ | beta barrels › SH3 › SH3 › SH3 › CABIT | 0.60 | 47.0 | 5.07e-01 | 100.0% | 94.9% |
| 3495496 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 35.0 | 4.04e-01 | 96.4% | 85.0% |
| 3650296 | 4.1.1.94 ↗ | beta barrels › SH3 › SH3 › SH3 › SAWADEE | 0.57 | 34.0 | 3.67e-01 | 100.0% | 68.4% |
| 3614906 | 4.26.1.8 ↗ | beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 › Saf4_Yju2 | 0.50 | 31.0 | 3.71e-01 | 100.0% | 100.0% |