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LacPavin_0818_WC40_scaffold_575784_prodigal-single.1__X__X__00090
Bact-VirLacPavin_0818_WC40_scaffold_575784_prodigal-single.1__X__X__00090
Identity
- Kingdom:
- phage
Quality
62.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 12-76
D2
medium
residues 149-290
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2d2sA01 | 1.20.58.1210 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Exo84p, N-terminal helical domain | 0.66 | 27.0 | 3.01e-01 | 85.2% | 44.8% |
| 4ap2B01 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.56 | 31.0 | 3.23e-01 | 100.0% | 56.7% |
| 1nklA00 | 1.10.225.10 | Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like | 0.54 | 28.0 | 3.57e-01 | 77.5% | 87.2% |
| 7q1bA01 | 3.40.800.20 | Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Histone deacetylase domain | 0.51 | 41.0 | 3.11e-01 | 87.3% | 88.8% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3262554 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.63 | 33.0 | 4.32e-01 | 77.5% | 94.7% |
| 3805874 | 2007.3.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Ligase_CoA | 0.50 | 44.0 | 4.03e-01 | 96.5% | 98.9% |
| 3227955 | 2484.8.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Separase pseudo-protease domain (PPD) › Separase pseudo-protease domain (PPD) › Peptidase_C50 | 0.50 | 35.0 | 2.90e-01 | 71.1% | 95.4% |
D3
medium
residues 563-637
D4
medium
residues 667-722
Domain cluster:
representative
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1paqA00 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.71 | 60.0 | 4.41e-01 | 100.0% | 38.5% |
| 6vq6G02 | 1.20.1460.10 | Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › subunit c (vma5p) of the yeast v-atpase, domain 2 | 0.67 | 47.0 | 3.26e-01 | 75.0% | 84.2% |
| 4xvxA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.66 | 46.0 | 3.39e-01 | 73.2% | 27.9% |
| 1nt2B02 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.66 | 44.0 | 4.20e-01 | 73.2% | 58.2% |
| 3l8rA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.64 | 55.0 | 4.61e-01 | 100.0% | 85.3% |
| 1cf7A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 54.0 | 5.16e-01 | 100.0% | 98.5% |
| 2yevC00 | 6.10.280.110 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.63 | 44.0 | 4.30e-01 | 75.0% | 88.9% |
| 1wa8A00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.63 | 46.0 | 3.85e-01 | 78.6% | 80.8% |
| 3favD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.63 | 43.0 | 3.91e-01 | 73.2% | 97.4% |
| 2kmuA00 | 1.10.10.1460 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.62 | 46.0 | 4.68e-01 | 92.9% | 85.7% |
| 2lsoA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 51.0 | 4.53e-01 | 92.9% | 90.4% |
| 3ckdA02 | 1.20.58.360 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Shigella T3SS effector IpaH defines | 0.62 | 55.0 | 4.27e-01 | 100.0% | 93.5% |
| 3b0pA02 | 1.20.120.1460 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.62 | 49.0 | 4.50e-01 | 87.5% | 76.0% |
| 4y66F01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 51.0 | 4.89e-01 | 96.4% | 100.0% |
| 2i7uA00 | 6.10.250.1010 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.62 | 42.0 | 4.10e-01 | 73.2% | 64.5% |
| 2ii2A02 | 1.10.220.10 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin | 0.62 | 50.0 | 5.03e-01 | 92.9% | 98.3% |
| 5jrcA00 | 1.20.58.2140 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 53.0 | 3.76e-01 | 100.0% | 54.8% |
| 2vs0A00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.61 | 40.0 | 3.56e-01 | 78.6% | 46.3% |
| 3rklA00 | 6.10.140.1640 | Special › Helix non-globular › Helix Hairpins › | 0.60 | 43.0 | 3.86e-01 | 76.8% | 62.5% |
| 4mduA02 | 1.10.220.10 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin | 0.60 | 48.0 | 4.36e-01 | 92.9% | 78.0% |
| 1n00A03 | 1.10.220.10 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin | 0.59 | 48.0 | 4.44e-01 | 91.1% | 76.7% |
| 3k3oA02 | 1.20.58.1360 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 50.0 | 4.46e-01 | 98.2% | 94.0% |
| 4d7rA01 | 1.10.220.20 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › | 0.58 | 48.0 | 4.34e-01 | 98.2% | 69.5% |
| 4dyqA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.58 | 47.0 | 4.03e-01 | 100.0% | 54.4% |
| 2k4jA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 44.0 | 3.78e-01 | 91.1% | 70.5% |
| 2b3tB01 | 6.10.140.1980 | Special › Helix non-globular › Helix Hairpins › | 0.57 | 41.0 | 3.92e-01 | 76.8% | 66.2% |
| 3d36B02 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.55 | 37.0 | 3.68e-01 | 73.2% | 83.6% |
| 3m03B00 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.54 | 43.0 | 3.75e-01 | 94.6% | 55.8% |
| 2itbB00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.53 | 46.0 | 3.16e-01 | 98.2% | 67.2% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3798195 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 62.0 | 5.47e-01 | 100.0% | 87.1% |
| 4990517 | 7573.1.1.1 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran | 0.69 | 58.0 | 3.93e-01 | 100.0% | 92.4% |
| 2429535 | 5071.1.1.1 ↗ | alpha bundles › cytochrome bc1 complex 11 kDa protein-like › Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) › Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) › UCR_hinge | 0.66 | 43.0 | 3.95e-01 | 73.2% | 50.7% |
| 4042824 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.63 | 42.0 | 3.72e-01 | 76.8% | 48.8% |
| 3950977 | 5058.1.1.9 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Colicin_V | 0.62 | 51.0 | 3.89e-01 | 100.0% | 83.9% |
| 3174373 | 101.1.2.780 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF31199 | 0.62 | 51.0 | 4.76e-01 | 100.0% | 89.3% |
| 5039854 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.62 | 42.0 | 3.84e-01 | 71.4% | 100.0% |
| 4081214 | 605.1.1.290 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › Phage_Nu1 | 0.60 | 42.0 | 3.94e-01 | 73.2% | 60.0% |
| 3993978 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.60 | 43.0 | 4.03e-01 | 76.8% | 88.6% |
| 3491287 | 176.1.1.1 ↗ | alpha arrays › Annexin › Annexin › Annexin › Annexin | 0.58 | 46.0 | 4.37e-01 | 92.9% | 71.4% |
| 3424878 | 5071.1.1.1 ↗ | alpha bundles › cytochrome bc1 complex 11 kDa protein-like › Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) › Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) › UCR_hinge | 0.58 | 39.0 | 3.71e-01 | 71.4% | 60.9% |
| 4933826 | 5058.1.1.16 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › MS_channel_1st_1 | 0.57 | 38.0 | 2.96e-01 | 87.5% | 33.1% |
| 3479797 | 176.1.1.0 ↗ | alpha arrays › Annexin › Annexin › Annexin | 0.57 | 47.0 | 4.20e-01 | 96.4% | 80.0% |
| 5053090 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.56 | 39.0 | 3.90e-01 | 75.0% | 70.0% |
| 3705426 | 601.1.2.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) | 0.55 | 45.0 | 3.44e-01 | 92.9% | 67.4% |
| 5061885 | 298.2.1.0 ↗ | a+b two layers › FwdE/GAPDH domain-like › FwdE-like › FwdE-like | 0.51 | 34.0 | 2.42e-01 | 71.4% | 27.1% |
D5
medium
residues 723-814
Domain cluster:
representative
CATH (52)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1mzhA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.66 | 50.0 | 3.75e-01 | 81.5% | 65.8% |
| 3d3aA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.64 | 52.0 | 3.68e-01 | 87.0% | 80.7% |
| 1s2uB00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.61 | 48.0 | 3.42e-01 | 85.9% | 73.7% |
| 6s9vB01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.60 | 53.0 | 3.61e-01 | 100.0% | 92.8% |
| 4ix1A00 | 3.40.50.12500 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.60 | 45.0 | 3.39e-01 | 80.4% | 93.2% |
| 5tnvA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.60 | 50.0 | 3.55e-01 | 94.6% | 81.7% |
| 2gduA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.60 | 52.0 | 3.59e-01 | 100.0% | 93.7% |
| 4dnhA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.60 | 51.0 | 3.45e-01 | 97.8% | 67.8% |
| 1xw8A00 | 3.20.20.370 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase/deacetylase | 0.59 | 51.0 | 3.84e-01 | 95.7% | 94.3% |
| 1aa1B02 | 3.20.20.110 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Ribulose bisphosphate carboxylase, large subunit, C-terminal domain | 0.59 | 52.0 | 3.66e-01 | 100.0% | 89.9% |
| 3rcnA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.59 | 49.0 | 3.37e-01 | 92.4% | 85.2% |
| 2eplX02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.59 | 49.0 | 3.42e-01 | 91.3% | 85.1% |
| 1t70A00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.59 | 49.0 | 3.60e-01 | 92.4% | 96.5% |
| 6jebA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.59 | 50.0 | 3.39e-01 | 95.7% | 78.9% |
| 1telA02 | 3.20.20.110 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Ribulose bisphosphate carboxylase, large subunit, C-terminal domain | 0.59 | 51.0 | 3.72e-01 | 100.0% | 88.7% |
| 6lcjD01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.59 | 49.0 | 3.49e-01 | 93.5% | 91.1% |
| 3nwrA02 | 3.20.20.110 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Ribulose bisphosphate carboxylase, large subunit, C-terminal domain | 0.58 | 51.0 | 3.68e-01 | 100.0% | 90.2% |
| 7wdtA03 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.58 | 50.0 | 3.33e-01 | 95.7% | 95.6% |
| 4wjmA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.58 | 50.0 | 3.48e-01 | 95.7% | 88.1% |
| 1yhtA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.58 | 50.0 | 3.44e-01 | 97.8% | 87.2% |
| 1c7sA03 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.58 | 50.0 | 3.25e-01 | 100.0% | 94.0% |
| 5diyA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.58 | 48.0 | 3.40e-01 | 92.4% | 83.4% |
| 2j62A02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.58 | 50.0 | 3.56e-01 | 100.0% | 91.5% |
| 3kzsA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.58 | 46.0 | 3.50e-01 | 88.0% | 77.9% |
| 1nowA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.58 | 49.0 | 3.35e-01 | 95.7% | 89.7% |
| 1mi3A00 | 3.20.20.100 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain | 0.58 | 51.0 | 3.54e-01 | 100.0% | 80.9% |
| 3qyqA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.57 | 49.0 | 3.54e-01 | 95.7% | 81.3% |
| 8c5iA01 | 3.60.110.10 | Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase | 0.57 | 46.0 | 3.22e-01 | 89.1% | 78.8% |
| 2pjuA02 | 3.40.50.10660 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › PrpR receptor domain-like | 0.57 | 40.0 | 4.13e-01 | 72.8% | 84.1% |
| 6yhhA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.57 | 50.0 | 3.43e-01 | 100.0% | 88.4% |
| 1yi8B01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.57 | 47.0 | 3.64e-01 | 92.4% | 81.5% |
| 3ctpA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.56 | 42.0 | 3.80e-01 | 79.3% | 86.7% |
| 6eztA03 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.56 | 47.0 | 3.23e-01 | 96.7% | 91.3% |
| 1d5aA02 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.56 | 43.0 | 3.34e-01 | 84.8% | 90.3% |
| 7dvbA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.55 | 47.0 | 3.22e-01 | 97.8% | 81.6% |
| 3tghA00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.55 | 46.0 | 3.30e-01 | 95.7% | 85.1% |
| 1gg4A01 | 3.90.190.20 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain | 0.55 | 44.0 | 3.96e-01 | 89.1% | 73.5% |
| 5swuA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.55 | 45.0 | 3.42e-01 | 94.6% | 73.7% |
| 4qarA00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.54 | 44.0 | 3.54e-01 | 91.3% | 99.0% |
| 3wuyA00 | 3.60.110.10 | Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase | 0.54 | 43.0 | 3.08e-01 | 88.0% | 82.9% |
| 5oesA04 | 3.40.50.1760 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glutathione synthase, substrate-binding domain superfamily, eukaryotic | 0.54 | 39.0 | 3.63e-01 | 78.3% | 88.7% |
| 4xglA01 | 3.40.50.11980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 44.0 | 3.89e-01 | 93.5% | 68.8% |
| 4qdiA03 | 3.90.190.20 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain | 0.53 | 43.0 | 3.76e-01 | 90.2% | 61.5% |
| 1uqtA01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.53 | 41.0 | 3.11e-01 | 85.9% | 94.7% |
| 2ghrA01 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.52 | 42.0 | 3.16e-01 | 89.1% | 95.6% |
| 3iayA03 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.52 | 41.0 | 3.24e-01 | 88.0% | 99.1% |
| 1ez4B01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 43.0 | 3.76e-01 | 92.4% | 93.2% |
| 7lhsB01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.51 | 41.0 | 3.29e-01 | 89.1% | 67.3% |
| 2ixdA00 | 3.40.50.10320 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › LmbE-like | 0.51 | 40.0 | 3.09e-01 | 88.0% | 60.3% |
| 1noyB02 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.51 | 41.0 | 3.19e-01 | 92.4% | 99.1% |
| 4jyjB00 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.50 | 40.0 | 2.96e-01 | 89.1% | 70.9% |
| 3cr8C02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.50 | 40.0 | 3.18e-01 | 88.0% | 57.6% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4862450 | 2002.1.1.33 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_20 | 0.60 | 50.0 | 3.51e-01 | 94.6% | 88.6% |
| 3895966 | 2002.1.1.150 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › NAGidase | 0.59 | 51.0 | 3.23e-01 | 100.0% | 67.0% |
| 4500386 | 2002.1.1.87 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Melibiase | 0.58 | 51.0 | 3.60e-01 | 100.0% | 88.1% |
| 4984677 | 2007.1.14.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like | 0.58 | 45.0 | 4.10e-01 | 84.8% | 84.6% |
| 5041951 | 2007.24.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › AtpF-like › AtpF-like › ATP-synt_F | 0.58 | 44.0 | 4.30e-01 | 82.6% | 98.1% |
| 3474528 | 323.1.1.29 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › DMAP_binding | 0.58 | 49.0 | 3.69e-01 | 95.7% | 47.5% |
| 2049239 | 2002.1.1.150 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › NAGidase | 0.58 | 50.0 | 3.61e-01 | 100.0% | 89.9% |
| 2813607 | 2002.1.1.33 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_20 | 0.57 | 48.0 | 3.26e-01 | 95.7% | 92.2% |
| 2581410 | 2002.1.1.150 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › NAGidase | 0.57 | 47.0 | 3.42e-01 | 92.4% | 89.7% |
| 5083481 | 2002.1.1.161 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_97 | 0.57 | 49.0 | 3.77e-01 | 96.7% | 95.0% |
| 5074840 | 2002.1.1.57 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › URO-D | 0.57 | 49.0 | 3.35e-01 | 97.8% | 81.1% |
| 4299161 | 7512.1.1.23 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_52 | 0.57 | 48.0 | 4.24e-01 | 92.4% | 84.2% |
| 3939359 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.56 | 46.0 | 3.40e-01 | 92.4% | 84.5% |
| None | — | 0.56 | 49.0 | 3.17e-01 | 100.0% | 97.0% | |
| 3629876 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.56 | 46.0 | 3.38e-01 | 92.4% | 92.9% |
| 2706000 | 2002.1.1.150 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › NAGidase | 0.55 | 47.0 | 3.05e-01 | 95.7% | 61.7% |
| 3280635 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.55 | 45.0 | 3.40e-01 | 92.4% | 98.0% |
| 5018108 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.55 | 45.0 | 3.69e-01 | 89.1% | 78.2% |
| 3208915 | 2002.1.1.150 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › NAGidase | 0.55 | 46.0 | 3.23e-01 | 95.7% | 86.8% |
| 3791615 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.55 | 45.0 | 3.13e-01 | 92.4% | 72.2% |
| 2878231 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.54 | 45.0 | 3.24e-01 | 93.5% | 93.0% |
| 3465523 | 207.1.1.96 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_At1g61320_AtMIF1 | 0.53 | 38.0 | 2.92e-01 | 75.0% | 54.0% |
| 4285177 | 2002.3.1.4 ↗ | a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › LamB_YcsF | 0.53 | 44.0 | 3.25e-01 | 93.5% | 77.7% |
| 5021440 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.52 | 46.0 | 3.40e-01 | 100.0% | 96.8% |