Back to structures

LacPavin_0818_WC40_scaffold_575784_prodigal-single.1__X__X__00097

Bact-Vir

LacPavin_0818_WC40_scaffold_575784_prodigal-single.1__X__X__00097

Identity

Kingdom:
phage

Quality

80.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-53
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4izbB02 1.10.12.10 Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 0.67 44.0 4.79e-01 76.9% 83.7%
2iskA01 3.40.109.10 Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase 0.65 59.0 3.90e-01 100.0% 44.6%
4fxdA04 3.90.1600.10 Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain 0.54 40.0 2.90e-01 80.8% 98.0%
1xriA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.51 33.0 2.46e-01 76.9% 22.5%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3654927 386.1.1.1 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.75 51.0 4.29e-01 71.2% 48.9%