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LacPavin_0818_WC40_scaffold_575784_prodigal-single.1__X__X__00206

Bact-Vir

LacPavin_0818_WC40_scaffold_575784_prodigal-single.1__X__X__00206

Identity

Kingdom:
phage

Quality

95.1 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-92
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF22253.3 best DUF6948 62.2 5.80e-17 97.7% 97.7%
CATH (38)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4f7uF00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.85 57.0 6.24e-01 89.7% 82.2%
1m5q101 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.85 55.0 6.16e-01 90.8% 83.8%
4m7dA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.85 54.0 6.25e-01 88.5% 87.7%
5mkiH00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.85 53.0 5.91e-01 87.4% 78.9%
6asoH00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.84 50.0 5.10e-01 85.1% 62.7%
4c92F00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.83 60.0 6.38e-01 93.1% 84.4%
1b34B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.83 53.0 5.76e-01 92.0% 77.0%
4emhA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.82 54.0 6.47e-01 87.4% 98.3%
1ljoA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.82 55.0 5.92e-01 88.5% 80.0%
2ej9A02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.81 42.0 5.59e-01 86.2% 91.8%
4m78N00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.81 51.0 5.63e-01 90.8% 78.9%
1u1sA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.81 44.0 5.01e-01 89.7% 71.2%
4f7uG00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.81 54.0 6.07e-01 89.7% 88.2%
4c92G00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.80 57.0 6.07e-01 93.1% 85.3%
3pggA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.79 56.0 5.94e-01 89.7% 82.1%
4c92A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.78 63.0 5.45e-01 100.0% 56.9%
1kq1H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.78 43.0 4.86e-01 88.5% 71.2%
1d3bC00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.78 52.0 5.73e-01 89.7% 84.5%
3jb9F00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.77 52.0 5.41e-01 90.8% 74.4%
1y96A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.74 47.0 4.77e-01 90.8% 65.1%
4c92C00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.74 54.0 5.70e-01 88.5% 83.5%
3by7E00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.73 59.0 6.32e-01 100.0% 98.7%
2vc8A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.73 48.0 5.26e-01 89.7% 81.9%
4a53A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.72 42.0 4.86e-01 88.5% 80.6%
1d3bB00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.72 56.0 5.83e-01 90.8% 87.7%
4c92B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.72 50.0 4.64e-01 89.7% 59.0%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 39.0 4.35e-01 90.8% 74.2%
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.67 42.0 4.36e-01 89.7% 67.5%
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.67 40.0 4.54e-01 89.7% 82.3%
1y71A00 2.30.30.430 Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain 0.65 46.0 4.29e-01 100.0% 58.7%
2d9tA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 37.0 4.54e-01 88.5% 100.0%
2ldmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 35.0 4.25e-01 87.4% 86.8%
2digA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 39.0 4.24e-01 95.4% 76.5%
4a4kA02 2.30.30.1160 Mainly Beta › Roll › SH3 type barrels. › 0.62 54.0 4.78e-01 100.0% 85.0%
2fb7A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.58 44.0 4.58e-01 89.7% 87.5%
1igqB00 2.30.30.150 Mainly Beta › Roll › SH3 type barrels. › KorB, C-terminal domain 0.57 35.0 3.97e-01 94.3% 91.2%
2eqmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 34.0 4.02e-01 88.5% 98.1%
1vwxM01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.52 36.0 3.69e-01 100.0% 76.5%
ECOD (92)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5003274 4.1.1.222 beta barrels › SH3 › SH3 › SH3 › DUF6948 0.93 88.0 8.72e-01 100.0% 95.6%
3965254 4.1.1.222 beta barrels › SH3 › SH3 › SH3 › DUF6948 0.90 85.0 8.21e-01 100.0% 90.5%
4996021 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.87 58.0 6.03e-01 92.0% 73.8%
5002088 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.87 60.0 6.29e-01 94.3% 77.5%
5037228 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.86 54.0 6.19e-01 87.4% 84.6%
4948178 4.1.1.484 beta barrels › SH3 › SH3 › SH3 › Lsm_C 0.86 54.0 6.07e-01 88.5% 80.0%
2632533 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.86 60.0 6.69e-01 88.5% 89.9%
4971102 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.86 54.0 6.06e-01 88.5% 80.0%
4990775 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.86 53.0 5.76e-01 88.5% 73.3%
5026766 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.86 53.0 6.13e-01 88.5% 84.6%
1120986 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.86 55.0 6.22e-01 88.5% 85.1%
4934755 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.85 56.0 6.18e-01 90.8% 82.9%
4983255 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.85 56.0 6.06e-01 89.7% 78.7%
5042049 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.85 55.0 5.63e-01 90.8% 68.2%
4013632 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.85 57.0 6.03e-01 88.5% 76.9%
4987003 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.84 53.0 6.10e-01 88.5% 86.2%
3167630 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.84 60.0 6.25e-01 89.7% 80.0%
4948069 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.83 61.0 6.53e-01 96.6% 88.0%
5077846 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.83 54.0 5.82e-01 88.5% 77.3%
4990442 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.83 57.0 5.98e-01 90.8% 77.5%
5011460 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.82 54.0 5.97e-01 90.8% 82.9%
4932541 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.82 55.0 5.94e-01 89.7% 80.8%
1175040 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.82 54.0 6.48e-01 87.4% 98.3%
3598832 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.82 55.0 6.37e-01 89.7% 92.3%
5075579 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.82 57.0 5.93e-01 93.1% 77.5%
4532859 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.81 52.0 6.15e-01 87.4% 95.0%
4029204 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.80 54.0 5.49e-01 89.7% 70.6%
3598657 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 54.0 5.12e-01 89.7% 61.0%
3227009 4.1.1.71 beta barrels › SH3 › SH3 › SH3 › Gemin7 0.79 47.0 5.11e-01 86.2% 70.7%
3936053 4.1.1.71 beta barrels › SH3 › SH3 › SH3 › Gemin7 0.79 49.0 5.43e-01 88.5% 78.6%
3214326 4.1.1.81 beta barrels › SH3 › SH3 › SH3 › LSM14 0.79 51.0 5.69e-01 90.8% 82.9%
3502962 4.1.1.89 beta barrels › SH3 › SH3 › SH3 › SM-ATX 0.78 57.0 6.01e-01 88.5% 82.5%
3586008 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 52.0 5.74e-01 90.8% 84.3%
3616088 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 52.0 5.82e-01 92.0% 85.7%
3772638 4.1.1.71 beta barrels › SH3 › SH3 › SH3 › Gemin7 0.78 49.0 5.14e-01 89.7% 69.1%
5044296 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 57.0 6.07e-01 90.8% 85.9%
3626400 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.77 63.0 5.38e-01 100.0% 56.9%
2701178 4.1.1.71 beta barrels › SH3 › SH3 › SH3 › Gemin7 0.77 49.0 4.94e-01 89.7% 64.4%
3740204 4.1.1.71 beta barrels › SH3 › SH3 › SH3 › Gemin7 0.77 49.0 5.04e-01 90.8% 67.1%
3928928 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 51.0 5.45e-01 90.8% 78.7%
3793196 4.1.1.71 beta barrels › SH3 › SH3 › SH3 › Gemin7 0.76 48.0 4.82e-01 89.7% 62.2%
3812580 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.76 62.0 5.44e-01 100.0% 61.0%
3486357 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 59.0 6.14e-01 93.1% 88.7%
3927391 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.75 58.0 5.50e-01 93.1% 68.9%
4485354 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.75 50.0 4.89e-01 89.7% 63.8%
3915752 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.74 55.0 5.44e-01 90.8% 74.4%
3168781 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.74 56.0 5.23e-01 92.0% 65.7%
3619686 4.1.1.71 beta barrels › SH3 › SH3 › SH3 › Gemin7 0.73 45.0 5.47e-01 87.4% 98.2%
166026 4.1.1.81 beta barrels › SH3 › SH3 › SH3 › LSM14 0.73 48.0 5.26e-01 89.7% 81.9%
3258918 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.72 51.0 4.77e-01 90.8% 60.0%
3699736 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 58.0 5.69e-01 88.5% 78.7%
3999729 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.72 51.0 5.07e-01 90.8% 70.8%
5032402 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 56.0 5.66e-01 89.7% 83.5%
4380345 4.1.1.257 beta barrels › SH3 › SH3 › SH3 › Flag1_repress 0.72 48.0 4.92e-01 98.9% 70.6%
3706504 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.71 57.0 5.81e-01 95.4% 85.9%
3832288 4.1.1.81 beta barrels › SH3 › SH3 › SH3 › LSM14 0.70 57.0 5.65e-01 90.8% 82.2%
3271407 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 50.0 5.11e-01 95.4% 76.5%
3626383 4.1.1.81 beta barrels › SH3 › SH3 › SH3 › LSM14 0.70 54.0 5.26e-01 90.8% 74.7%
3232582 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 46.0 4.51e-01 90.8% 62.1%
3187241 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.69 59.0 5.43e-01 90.8% 77.3%
4976962 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 61.0 5.85e-01 96.6% 83.0%
3176686 4.1.1.81 beta barrels › SH3 › SH3 › SH3 › LSM14 0.69 58.0 5.93e-01 100.0% 92.9%
3625817 4.1.1.219 beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.69 44.0 4.62e-01 90.8% 71.2%
3788565 4.1.1.89 beta barrels › SH3 › SH3 › SH3 › SM-ATX 0.69 51.0 5.05e-01 89.7% 74.4%
3593948 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 55.0 5.56e-01 90.8% 85.9%
3168996 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.68 59.0 5.11e-01 90.8% 66.4%
3942526 4.1.1.257 beta barrels › SH3 › SH3 › SH3 › Flag1_repress 0.68 46.0 4.69e-01 100.0% 70.6%
3173156 4.1.1.344 beta barrels › SH3 › SH3 › SH3 › PF31193 0.68 44.0 4.60e-01 90.8% 71.2%
3455165 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.68 55.0 5.31e-01 90.8% 77.9%
3600405 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 57.0 5.68e-01 96.6% 86.7%
3820621 4.1.1.81 beta barrels › SH3 › SH3 › SH3 › LSM14 0.67 53.0 5.50e-01 90.8% 90.0%
4026408 4.1.1.219 beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.67 42.0 4.06e-01 90.8% 56.0%
4015057 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 57.0 5.40e-01 89.7% 84.0%
3368568 4.1.1.81 beta barrels › SH3 › SH3 › SH3 › LSM14 0.67 55.0 5.48e-01 95.4% 84.4%
4017204 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.66 57.0 5.42e-01 90.8% 83.0%
3722424 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.66 57.0 5.44e-01 92.0% 84.0%
3484138 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 56.0 5.42e-01 92.0% 86.7%
3328647 4.1.1.219 beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.66 43.0 4.41e-01 94.3% 68.2%
3272363 4.1.1.219 beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.66 45.0 4.36e-01 90.8% 64.2%
3610074 4.1.1.81 beta barrels › SH3 › SH3 › SH3 › LSM14 0.66 55.0 5.02e-01 92.0% 70.0%
3389662 4.1.1.219 beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.65 45.0 4.65e-01 90.8% 77.5%
3197566 4.1.1.89 beta barrels › SH3 › SH3 › SH3 › SM-ATX 0.64 54.0 5.14e-01 89.7% 80.0%
3786412 4.1.1.344 beta barrels › SH3 › SH3 › SH3 › PF31193 0.64 46.0 4.79e-01 92.0% 81.2%
3819397 4.1.1.219 beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.64 42.0 4.41e-01 90.8% 73.8%
3702167 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 55.0 4.99e-01 94.3% 71.3%
4019995 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.62 53.0 4.85e-01 90.8% 76.4%
4005412 3523.1.1.3 beta meanders › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › LptC 0.62 43.0 3.58e-01 82.8% 42.0%
3395150 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 37.0 4.29e-01 88.5% 86.7%
3721787 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 44.0 4.50e-01 90.8% 80.0%
3825252 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.57 44.0 4.36e-01 94.3% 77.8%
3163636 3523.1.1.3 beta meanders › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › LptC 0.55 43.0 3.49e-01 82.8% 50.0%
3684460 4.1.1.219 beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.52 45.0 4.42e-01 94.3% 90.5%