←Back to structures
LacPavin_0818_WC40_scaffold_575784_prodigal-single.1__X__X__00429
Bact-VirLacPavin_0818_WC40_scaffold_575784_prodigal-single.1__X__X__00429
Identity
- Kingdom:
- phage
Quality
83.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 78-262
Domain cluster:
rep: OR420741.1__WOZ55670.1__CRP118_gp39__00039__D1-140
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05257.23 best | CHAP | 27.5 | 5.10e-06 | 48.6% | 97.5% |
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4fdyA02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.74 | 48.0 | 5.65e-01 | 99.5% | 91.0% |
| 2vobB02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.61 | 53.0 | 5.08e-01 | 98.9% | 79.4% |
| 3m1uA01 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.60 | 47.0 | 4.91e-01 | 97.8% | 88.3% |
| 4g54A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.59 | 36.0 | 4.29e-01 | 93.0% | 88.0% |
| 3a2yA00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.59 | 52.0 | 5.28e-01 | 98.4% | 95.1% |
| 3k8uA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.57 | 40.0 | 4.63e-01 | 85.9% | 100.0% |
| 4ry2A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.57 | 40.0 | 4.49e-01 | 98.9% | 93.6% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3279614 | 219.1.1.28 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP | 0.79 | 56.0 | 6.13e-01 | 97.8% | 85.8% |
| 4030940 | 219.1.1.28 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP | 0.69 | 51.0 | 5.59e-01 | 99.5% | 91.0% |
| 5018860 | 219.1.1.28 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP | 0.68 | 50.0 | 5.57e-01 | 98.4% | 92.7% |
| 1905738 | 219.1.1.28 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP | 0.68 | 50.0 | 5.60e-01 | 98.9% | 95.3% |
| 3393319 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.64 | 32.0 | 4.01e-01 | 87.0% | 78.2% |
| 3765289 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.62 | 31.0 | 4.15e-01 | 85.9% | 93.3% |
| 3881124 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.62 | 29.0 | 4.00e-01 | 84.9% | 88.9% |
| 3606829 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.61 | 52.0 | 5.07e-01 | 99.5% | 81.5% |
| 3261235 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.60 | 29.0 | 4.04e-01 | 82.7% | 96.5% |
| 3615154 | 219.1.1.28 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP | 0.59 | 53.0 | 5.34e-01 | 98.4% | 94.6% |
| 3936468 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 32.0 | 4.13e-01 | 87.0% | 93.0% |
| 3246086 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 30.0 | 3.96e-01 | 93.5% | 91.6% |
| 3702189 | 219.1.1.28 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP | 0.57 | 53.0 | 5.05e-01 | 98.4% | 92.4% |
| 3845425 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.57 | 28.0 | 3.80e-01 | 79.5% | 93.3% |
| 4030821 | 243.3.1.3 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY | 0.55 | 21.0 | 2.86e-01 | 94.6% | 63.2% |
| 3736175 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 25.0 | 3.56e-01 | 88.6% | 95.3% |