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LacPavin_0818_WC40_scaffold_575784_prodigal-single.1__X__X__00451
Bact-VirLacPavin_0818_WC40_scaffold_575784_prodigal-single.1__X__X__00451
Identity
- Kingdom:
- phage
Quality
92.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-82
Domain cluster:
rep: JN175269.1__AEO14585.1__MT_57039__00038__D2-85
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF10544.16 best | T5orf172 | 21.8 | 3.00e-04 | 88.9% | 74.5% |
| PF13455.13 | MUG113 | 26.1 | 1.40e-05 | 76.5% | 80.8% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ttcA01 | 3.90.870.30 | Alpha Beta › Alpha-Beta Complex › DHBP synthase › | 0.54 | 37.0 | 2.83e-01 | 71.6% | 43.9% |
| 2va8A03 | 1.10.3380.30 | Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › | 0.53 | 40.0 | 3.04e-01 | 85.2% | 64.9% |
| 4petA01 | 3.40.190.170 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bacterial extracellular solute-binding protein, family 7 | 0.52 | 36.0 | 2.78e-01 | 75.3% | 63.3% |
| 2m8hA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.50 | 37.0 | 3.47e-01 | 79.0% | 80.2% |