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LacPavin_0818_WC40_scaffold_575784_prodigal-single.1__X__X__00486
Bact-VirLacPavin_0818_WC40_scaffold_575784_prodigal-single.1__X__X__00486
Identity
- Kingdom:
- phage
Quality
50.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-89
Domain cluster:
rep: LC597490.1__BCO16078.1__X__00025__D258-356
CATH (82)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4nicA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.82 | 76.0 | 6.85e-01 | 100.0% | 99.1% |
| 2gfqA02 | 3.40.50.10700 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › AF0625-like | 0.80 | 63.0 | 6.33e-01 | 83.0% | 96.6% |
| 3kloA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.79 | 73.0 | 6.12e-01 | 100.0% | 84.0% |
| 3rkuA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.79 | 71.0 | 5.01e-01 | 100.0% | 85.8% |
| 1s8nA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.78 | 71.0 | 6.19e-01 | 100.0% | 90.2% |
| 4f6cB00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.78 | 69.0 | 4.50e-01 | 96.6% | 64.9% |
| 3r74B02 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.78 | 71.0 | 5.45e-01 | 100.0% | 97.9% |
| 4j1qA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.76 | 69.0 | 4.39e-01 | 100.0% | 28.3% |
| 1yqeA02 | 3.40.50.10700 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › AF0625-like | 0.76 | 66.0 | 6.45e-01 | 95.5% | 94.8% |
| 5im4F00 | 3.40.50.510 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component | 0.75 | 68.0 | 5.91e-01 | 100.0% | 80.9% |
| 3nbmA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.75 | 68.0 | 6.40e-01 | 100.0% | 97.1% |
| 4p0tB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.74 | 68.0 | 5.63e-01 | 100.0% | 92.0% |
| 2vosA01 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.74 | 66.0 | 4.58e-01 | 100.0% | 80.4% |
| 3dmyA03 | 3.40.50.261 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Succinyl-CoA synthetase domains | 0.74 | 66.0 | 5.41e-01 | 100.0% | 98.8% |
| 5lddC00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.74 | 66.0 | 5.37e-01 | 100.0% | 96.4% |
| 2nvwB01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.74 | 66.0 | 5.09e-01 | 100.0% | 80.1% |
| 4bmdA02 | 3.40.50.10190 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain | 0.73 | 63.0 | 6.09e-01 | 97.7% | 82.8% |
| 1pdoA00 | 3.40.50.510 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component | 0.72 | 64.0 | 5.69e-01 | 100.0% | 82.2% |
| 2mr5A00 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.72 | 64.0 | 5.60e-01 | 100.0% | 93.4% |
| 1atzB00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.72 | 64.0 | 5.04e-01 | 100.0% | 96.8% |
| 1gcuA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.72 | 64.0 | 5.46e-01 | 100.0% | 92.4% |
| 4g0mA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.72 | 62.0 | 5.45e-01 | 97.7% | 97.0% |
| 7bobA02 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.72 | 62.0 | 4.74e-01 | 95.5% | 100.0% |
| 2l2qA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.71 | 64.0 | 5.98e-01 | 100.0% | 91.7% |
| 1yt5A01 | 3.40.50.10330 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Probable inorganic polyphosphate/atp-NAD kinase; domain 1 | 0.71 | 64.0 | 5.65e-01 | 100.0% | 73.1% |
| 1zh8A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.71 | 63.0 | 5.41e-01 | 100.0% | 96.5% |
| 5e7qA01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.71 | 62.0 | 4.02e-01 | 96.6% | 23.9% |
| 4p1zA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.71 | 62.0 | 5.58e-01 | 100.0% | 87.4% |
| 2d5lA02 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.71 | 63.0 | 4.54e-01 | 100.0% | 84.9% |
| 2h0aA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.71 | 64.0 | 5.93e-01 | 100.0% | 89.3% |
| 2w42B01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.70 | 63.0 | 5.19e-01 | 100.0% | 73.4% |
| 7kx9A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.70 | 63.0 | 5.33e-01 | 100.0% | 81.9% |
| 3geeA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.70 | 63.0 | 5.50e-01 | 100.0% | 94.7% |
| 3lucA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.70 | 61.0 | 5.46e-01 | 100.0% | 95.3% |
| 4xfjB01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.69 | 57.0 | 4.56e-01 | 89.8% | 85.0% |
| 4mcjG00 | 3.40.50.450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.68 | 60.0 | 5.04e-01 | 98.9% | 83.8% |
| 1toaA02 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.68 | 60.0 | 5.32e-01 | 100.0% | 87.0% |
| 7jt8I02 | 3.90.190.20 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain | 0.68 | 52.0 | 4.47e-01 | 83.0% | 86.1% |
| 1gz0B02 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.68 | 60.0 | 4.91e-01 | 100.0% | 86.8% |
| 2jjqA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.67 | 59.0 | 4.57e-01 | 96.6% | 68.9% |
| 4qboA00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.67 | 55.0 | 5.46e-01 | 89.8% | 95.7% |
| 2yhaA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.67 | 59.0 | 5.13e-01 | 100.0% | 89.2% |
| 3fkdA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.67 | 60.0 | 4.51e-01 | 100.0% | 60.3% |
| 5kzkA02 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.67 | 59.0 | 4.92e-01 | 100.0% | 93.6% |
| 1ipaA02 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.67 | 59.0 | 4.96e-01 | 100.0% | 93.5% |
| 2orwB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 50.0 | 4.45e-01 | 84.1% | 55.9% |
| 2i6dA02 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.66 | 59.0 | 4.91e-01 | 100.0% | 94.9% |
| 2p11A01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.66 | 58.0 | 4.96e-01 | 100.0% | 97.2% |
| 3d7rA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.66 | 55.0 | 3.86e-01 | 93.2% | 75.0% |
| 3mweB01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.65 | 59.0 | 4.99e-01 | 96.6% | 89.9% |
| 5rl9B01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.65 | 48.0 | 4.07e-01 | 83.0% | 46.3% |
| 3qyfA01 | 3.40.50.10770 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Hypothetical protein VC1899 like domain (Restriction endonuclease-like) | 0.65 | 54.0 | 4.49e-01 | 93.2% | 92.1% |
| 2py6A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.65 | 55.0 | 5.04e-01 | 94.3% | 81.7% |
| 1j24A00 | 3.40.50.10130 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.65 | 51.0 | 4.55e-01 | 87.5% | 91.0% |
| 3fhlA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.65 | 56.0 | 4.92e-01 | 100.0% | 94.9% |
| 2p4gA00 | 3.40.430.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A | 0.65 | 48.0 | 3.51e-01 | 79.5% | 61.7% |
| 4atnA03 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.65 | 56.0 | 4.45e-01 | 96.6% | 76.9% |
| 1t6t200 | 3.40.1360.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dna Topoisomerase Vi A Subunit; Chain: A, domain 2 › | 0.64 | 50.0 | 4.67e-01 | 84.1% | 71.8% |
| 3g5jA00 | 3.40.250.10 | Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain | 0.64 | 52.0 | 4.63e-01 | 89.8% | 86.9% |
| 2avdA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.64 | 56.0 | 4.16e-01 | 96.6% | 71.2% |
| 2px0A02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 54.0 | 4.19e-01 | 100.0% | 43.8% |
| 3imkA00 | 3.40.50.450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.63 | 55.0 | 4.58e-01 | 100.0% | 74.1% |
| 4bxoA01 | 3.40.50.10130 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.62 | 56.0 | 4.85e-01 | 100.0% | 89.6% |
| 3e18A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.62 | 54.0 | 4.75e-01 | 100.0% | 96.3% |
| 2c4kA02 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.62 | 50.0 | 4.38e-01 | 88.6% | 72.6% |
| 3jx9A00 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.62 | 54.0 | 4.44e-01 | 98.9% | 75.1% |
| 2fokA03 | 3.40.91.30 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.62 | 52.0 | 4.19e-01 | 93.2% | 86.9% |
| 2p2sA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.62 | 53.0 | 4.67e-01 | 100.0% | 95.6% |
| 1mrzA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.61 | 47.0 | 3.93e-01 | 84.1% | 80.4% |
| 3flhB00 | 3.40.250.10 | Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain | 0.60 | 49.0 | 4.49e-01 | 90.9% | 67.8% |
| 2b8tA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 46.0 | 4.03e-01 | 84.1% | 59.7% |
| 4fb7A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.60 | 50.0 | 3.60e-01 | 93.2% | 95.1% |
| 3nhvC01 | 3.40.250.10 | Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain | 0.59 | 48.0 | 4.41e-01 | 90.9% | 68.3% |
| 1u6zA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.57 | 48.0 | 4.39e-01 | 95.5% | 95.8% |
| 7wbtA02 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.57 | 43.0 | 2.77e-01 | 80.7% | 33.0% |
| 7zllA01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.55 | 49.0 | 3.48e-01 | 100.0% | 42.7% |
| 1urmA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.55 | 48.0 | 3.95e-01 | 97.7% | 79.0% |
| 7d73E01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.55 | 48.0 | 3.64e-01 | 100.0% | 44.7% |
| 1y6zA02 | 3.40.50.11260 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 38.0 | 3.88e-01 | 88.6% | 76.7% |
| 1xngA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.53 | 47.0 | 3.40e-01 | 98.9% | 40.9% |
| 7k3zG01 | 3.50.7.10 | Alpha Beta › 3-Layer(bba) Sandwich › GroEL › GroEL | 0.52 | 45.0 | 3.47e-01 | 100.0% | 50.7% |
| 1kqpA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.51 | 41.0 | 3.01e-01 | 90.9% | 52.8% |
ECOD (91)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4969233 | 2007.1.3.73 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › DUF2325 | 0.86 | 79.0 | 7.55e-01 | 98.9% | 96.0% |
| 4936294 | 2007.1.3.73 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › DUF2325 | 0.85 | 78.0 | 7.21e-01 | 100.0% | 88.2% |
| 4681655 | 4978.1.1.2 ↗ | a/b three-layered sandwiches › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › DUF2325 | 0.84 | 76.0 | 7.40e-01 | 96.6% | 98.9% |
| 3667511 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.83 | 72.0 | 6.87e-01 | 92.0% | 95.0% |
| 3388239 | 2007.1.2.17 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › DUF2325 | 0.82 | 75.0 | 7.37e-01 | 100.0% | 98.9% |
| 3975014 | 2007.1.3.12 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › VpsT-like_REC | 0.81 | 74.0 | 6.08e-01 | 100.0% | 74.8% |
| 4615208 | 2007.2.2.7 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Phosphotyrosine protein phosphatases I-like › DUF2325 | 0.81 | 74.0 | 7.13e-01 | 100.0% | 99.0% |
| 5052194 | 2007.15.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › N-deoxyribosyltransferase › N-deoxyribosyltransferase | 0.81 | 65.0 | 5.73e-01 | 85.2% | 79.2% |
| 140201 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.81 | 75.0 | 6.72e-01 | 100.0% | 97.4% |
| 5018579 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.81 | 74.0 | 6.07e-01 | 100.0% | 81.9% |
| 4669960 | 4978.1.1.0 ↗ | a/b three-layered sandwiches › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins | 0.80 | 61.0 | 6.22e-01 | 79.5% | 96.5% |
| 3891379 | 2004.1.1.122 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › IIGP | 0.80 | 72.0 | 5.30e-01 | 100.0% | 75.9% |
| 4273752 | 4978.1.1.1 ↗ | a/b three-layered sandwiches › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › tRNA_deacylase | 0.79 | 61.0 | 6.10e-01 | 81.8% | 97.8% |
| 4125585 | 4978.1.1.1 ↗ | a/b three-layered sandwiches › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › tRNA_deacylase | 0.79 | 60.0 | 6.15e-01 | 80.7% | 95.3% |
| 5054319 | 4978.1.1.1 ↗ | a/b three-layered sandwiches › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › tRNA_deacylase | 0.78 | 60.0 | 6.02e-01 | 81.8% | 95.5% |
| 4933592 | 4978.1.1.1 ↗ | a/b three-layered sandwiches › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › tRNA_deacylase | 0.77 | 60.0 | 6.05e-01 | 83.0% | 95.5% |
| 5074902 | 4978.1.1.1 ↗ | a/b three-layered sandwiches › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › tRNA_deacylase | 0.77 | 65.0 | 6.45e-01 | 89.8% | 98.9% |
| 4637998 | 2007.2.2.7 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Phosphotyrosine protein phosphatases I-like › DUF2325 | 0.77 | 68.0 | 6.64e-01 | 96.6% | 97.9% |
| 4209208 | 2007.1.2.17 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › DUF2325 | 0.77 | 68.0 | 6.63e-01 | 96.6% | 97.9% |
| 4942994 | 4978.1.1.1 ↗ | a/b three-layered sandwiches › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › tRNA_deacylase | 0.77 | 64.0 | 6.43e-01 | 89.8% | 96.7% |
| 4192990 | 4978.1.1.1 ↗ | a/b three-layered sandwiches › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › tRNA_deacylase | 0.77 | 65.0 | 6.33e-01 | 90.9% | 94.7% |
| 4943603 | 4978.1.1.0 ↗ | a/b three-layered sandwiches › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins | 0.77 | 58.0 | 5.90e-01 | 79.5% | 98.8% |
| 5000466 | 4978.1.1.1 ↗ | a/b three-layered sandwiches › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › tRNA_deacylase | 0.77 | 59.0 | 5.92e-01 | 81.8% | 97.7% |
| 5037855 | 7539.1.1.1 ↗ | a/b three-layered sandwiches › Creatininase › Creatininase › Creatininase › Creatininase | 0.76 | 66.0 | 5.03e-01 | 98.9% | 91.6% |
| 4133393 | 2007.1.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › GATase | 0.76 | 69.0 | 5.14e-01 | 100.0% | 97.7% |
| 4451463 | 4978.1.1.1 ↗ | a/b three-layered sandwiches › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › tRNA_deacylase | 0.75 | 66.0 | 6.36e-01 | 95.5% | 92.9% |
| 5076533 | 4978.1.1.1 ↗ | a/b three-layered sandwiches › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › tRNA_deacylase | 0.75 | 62.0 | 6.08e-01 | 89.8% | 94.7% |
| 3388418 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.74 | 67.0 | 6.18e-01 | 97.7% | 88.2% |
| 4939281 | 2007.3.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains | 0.74 | 66.0 | 5.34e-01 | 100.0% | 93.5% |
| 5075460 | 2007.3.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains | 0.74 | 67.0 | 5.46e-01 | 100.0% | 97.5% |
| 4669975 | 2007.1.4.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Phosphofructokinase N-terminal domain | 0.73 | 64.0 | 6.24e-01 | 95.5% | 98.9% |
| 4667584 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.73 | 66.0 | 5.03e-01 | 100.0% | 95.0% |
| 4500471 | 4978.1.1.1 ↗ | a/b three-layered sandwiches › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › tRNA_deacylase | 0.72 | 65.0 | 5.87e-01 | 100.0% | 81.7% |
| 5027612 | 7592.1.1.0 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains | 0.72 | 59.0 | 5.43e-01 | 89.8% | 98.3% |
| 3947000 | 2004.1.1.120 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ResIII | 0.72 | 56.0 | 4.69e-01 | 84.1% | 64.7% |
| 3733361 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.71 | 64.0 | 5.63e-01 | 100.0% | 85.4% |
| 3592079 | 7590.1.1.0 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs | 0.71 | 63.0 | 5.13e-01 | 100.0% | 76.5% |
| 4060734 | 4978.1.1.1 ↗ | a/b three-layered sandwiches › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › tRNA_deacylase | 0.71 | 61.0 | 6.12e-01 | 94.3% | 96.7% |
| 3775740 | 2007.9.1.17 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › DUF4062 | 0.71 | 63.0 | 4.79e-01 | 100.0% | 98.6% |
| 3703556 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.71 | 55.0 | 4.29e-01 | 84.1% | 64.6% |
| 3854580 | 2007.9.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain | 0.71 | 62.0 | 4.76e-01 | 100.0% | 98.6% |
| 5029329 | 7592.1.1.0 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains | 0.71 | 57.0 | 5.31e-01 | 87.5% | 98.2% |
| 4954063 | 2007.1.4.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Phosphofructokinase N-terminal domain | 0.71 | 64.0 | 5.86e-01 | 100.0% | 82.6% |
| 5024272 | 7597.1.1.0 ↗ | a/b three-layered sandwiches › Endolysin C-terminal domain › Endolysin C-terminal domain › Endolysin C-terminal domain | 0.70 | 60.0 | 5.40e-01 | 95.5% | 91.2% |
| 4586283 | 4978.1.1.1 ↗ | a/b three-layered sandwiches › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › tRNA_deacylase | 0.70 | 62.0 | 4.83e-01 | 100.0% | 50.8% |
| 3165324 | 2003.1.10.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain | 0.70 | 50.0 | 5.52e-01 | 80.7% | 95.7% |
| 3223797 | 7590.1.1.2 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Piwi | 0.70 | 62.0 | 5.06e-01 | 100.0% | 77.0% |
| 4930485 | 2004.1.1.1204 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF1638 | 0.70 | 62.0 | 4.46e-01 | 100.0% | 97.6% |
| 4978721 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.69 | 50.0 | 4.56e-01 | 75.0% | 95.7% |
| 3235584 | 7590.1.1.2 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Piwi | 0.69 | 62.0 | 5.05e-01 | 100.0% | 78.2% |
| 3916545 | 7590.1.1.3 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Piwi,ArgoMid | 0.69 | 61.0 | 4.74e-01 | 100.0% | 63.1% |
| 5023706 | 2007.1.3.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Oxidored_q6 | 0.69 | 62.0 | 5.12e-01 | 100.0% | 86.5% |
| 4960026 | 4978.1.1.1 ↗ | a/b three-layered sandwiches › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › tRNA_deacylase | 0.69 | 61.0 | 5.86e-01 | 98.9% | 91.0% |
| 3609439 | 2005.1.1.8 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Arginosuc_synth | 0.69 | 55.0 | 4.42e-01 | 88.6% | 80.0% |
| 3583554 | 7590.1.1.9 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › PF29016 | 0.69 | 61.0 | 5.16e-01 | 100.0% | 89.3% |
| 5063868 | 2004.1.1.101 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MeaB | 0.68 | 61.0 | 4.33e-01 | 100.0% | 70.0% |
| 3611837 | 7590.1.1.0 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs | 0.68 | 60.0 | 5.03e-01 | 100.0% | 71.6% |
| 5049201 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.68 | 60.0 | 4.61e-01 | 100.0% | 86.7% |
| 4051570 | 2003.1.5.46 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS | 0.68 | 57.0 | 4.45e-01 | 92.0% | 70.0% |
| 4614160 | 2003.1.2.7 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2 | 0.68 | 61.0 | 3.88e-01 | 100.0% | 97.3% |
| 3988514 | 2003.1.1.71 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › CoA_binding_3 | 0.67 | 58.0 | 5.26e-01 | 95.5% | 92.5% |
| 4989973 | 2007.1.16.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Iron-sulphur enzyme Dph2 | 0.67 | 52.0 | 5.26e-01 | 92.0% | 83.3% |
| 3409128 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.67 | 52.0 | 4.08e-01 | 84.1% | 63.7% |
| 3622925 | 7590.1.1.2 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Piwi | 0.67 | 58.0 | 4.63e-01 | 100.0% | 65.8% |
| 4940782 | 2008.1.1.16 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat | 0.67 | 49.0 | 4.57e-01 | 79.5% | 93.0% |
| 4951053 | 2003.1.1.48 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › YjeF_N | 0.66 | 55.0 | 4.26e-01 | 92.0% | 68.0% |
| 1712146 | 2488.1.1.1 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › SpoU_methylase | 0.66 | 58.0 | 4.80e-01 | 100.0% | 88.3% |
| 3815695 | 2006.1.4.3 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › NYN | 0.65 | 52.0 | 4.50e-01 | 87.5% | 88.6% |
| 3220963 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.63 | 50.0 | 3.95e-01 | 87.5% | 96.3% |
| 5048302 | 2007.1.11.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › L-fucose isomerase, N-terminal and second domains | 0.62 | 53.0 | 4.70e-01 | 100.0% | 91.1% |
| 4959001 | 2004.1.1.343 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_14 | 0.61 | 48.0 | 3.70e-01 | 85.2% | 56.6% |
| 4952358 | 7570.1.1.0 ↗ | a/b three-layered sandwiches › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain | 0.61 | 48.0 | 4.28e-01 | 87.5% | 83.1% |
| 3717378 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.61 | 48.0 | 3.39e-01 | 86.4% | 52.5% |
| 4968084 | 2004.1.1.343 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_14 | 0.61 | 47.0 | 3.58e-01 | 85.2% | 52.3% |
| 3272042 | 2003.1.5.246 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_12, KR | 0.59 | 49.0 | 3.10e-01 | 96.6% | 34.4% |
| 4943645 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.59 | 43.0 | 3.96e-01 | 78.4% | 94.2% |
| 5058048 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.59 | 48.0 | 4.10e-01 | 97.7% | 55.0% |
| None | — | 0.58 | 46.0 | 3.41e-01 | 86.4% | 60.4% | |
| None | — | 0.58 | 52.0 | 4.32e-01 | 100.0% | 89.0% | |
| 3267396 | 2484.3.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Creatinase/prolidase N-terminal domain › Creatinase/prolidase N-terminal domain › Creatinase_N | 0.58 | 47.0 | 3.90e-01 | 89.8% | 78.2% |
| 3258547 | 2484.1.1.48 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II | 0.57 | 49.0 | 4.03e-01 | 97.7% | 78.8% |
| 3367466 | 2484.1.1.48 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II | 0.56 | 46.0 | 3.72e-01 | 94.3% | 78.4% |
| 1518874 | 7523.1.1.8 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_1 | 0.55 | 42.0 | 3.95e-01 | 83.0% | 92.8% |
| 3928549 | 7516.1.1.69 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_92 | 0.55 | 49.0 | 3.49e-01 | 100.0% | 37.8% |
| None | — | 0.55 | 45.0 | 3.44e-01 | 89.8% | 74.6% | |
| 3399047 | 7516.1.1.69 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_92 | 0.53 | 46.0 | 3.34e-01 | 100.0% | 37.8% |
| 3718183 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.53 | 42.0 | 3.15e-01 | 92.0% | 69.1% |
| 3693181 | 375.1.1.54 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Thr_synth_N | 0.52 | 43.0 | 3.15e-01 | 100.0% | 32.9% |
| 4386055 | 2005.1.1.47 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase, tRNA_Me_trans | 0.52 | 47.0 | 3.37e-01 | 100.0% | 40.8% |
| 3735862 | 2003.4.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Tryptophan synthase beta subunit-like PLP-dependent enzymes › Tryptophan synthase beta subunit-like PLP-dependent enzymes › Thr_synth_N | 0.52 | 42.0 | 3.14e-01 | 100.0% | 32.9% |
| 1181023 | 7516.1.1.6 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_8 | 0.51 | 43.0 | 4.01e-01 | 100.0% | 90.6% |
D2
medium
residues 140-255_273-289