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LacPavin_0818_WC40_scaffold_575784_prodigal-single.1__X__X__00487
Bact-VirLacPavin_0818_WC40_scaffold_575784_prodigal-single.1__X__X__00487
Identity
- Kingdom:
- phage
Quality
89.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-87
Domain cluster:
rep: MT670419.1__QNO00340.1__phiPsa315_106__00106__D4-67
CATH (47)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6my0A02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.81 | 51.0 | 5.57e-01 | 74.0% | 76.9% |
| 3h8zA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.79 | 49.0 | 5.38e-01 | 75.3% | 76.6% |
| 2heqA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.78 | 52.0 | 6.11e-01 | 70.1% | 98.1% |
| 5kcoA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 55.0 | 6.18e-01 | 81.8% | 100.0% |
| 2cudA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.74 | 52.0 | 5.18e-01 | 72.7% | 72.2% |
| 1ts9A00 | 2.30.30.210 | Mainly Beta › Roll › SH3 type barrels. › Ribonuclease P/MRP, subunit p29 | 0.74 | 49.0 | 4.53e-01 | 76.6% | 54.1% |
| 1ug1A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.73 | 51.0 | 4.77e-01 | 71.4% | 64.1% |
| 4k7cA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.73 | 56.0 | 3.51e-01 | 81.8% | 91.1% |
| 1jb0E00 | 2.30.30.50 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 53.0 | 5.58e-01 | 75.3% | 97.1% |
| 4iimA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.73 | 49.0 | 5.59e-01 | 71.4% | 94.7% |
| 1gcqB00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.72 | 49.0 | 5.58e-01 | 70.1% | 94.7% |
| 1ov3A02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.72 | 49.0 | 5.61e-01 | 70.1% | 98.2% |
| 4x9cD00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 47.0 | 5.18e-01 | 76.6% | 85.0% |
| 1lckA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.72 | 49.0 | 5.55e-01 | 71.4% | 94.9% |
| 1ex4B02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.72 | 47.0 | 5.32e-01 | 77.9% | 88.1% |
| 1m9sA03 | 2.30.30.170 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 56.0 | 5.74e-01 | 84.4% | 98.7% |
| 4cc2A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.72 | 49.0 | 5.36e-01 | 71.4% | 93.7% |
| 2pqhB00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.71 | 49.0 | 5.27e-01 | 71.4% | 84.6% |
| 2fhdA02 | 2.30.30.810 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 51.0 | 5.30e-01 | 75.3% | 84.7% |
| 6ghmC02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.71 | 51.0 | 5.50e-01 | 75.3% | 96.9% |
| 1m9sA04 | 2.30.30.170 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 59.0 | 5.68e-01 | 90.9% | 94.2% |
| 4epcA02 | 2.30.30.170 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 53.0 | 5.48e-01 | 80.5% | 100.0% |
| 7afrX02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.69 | 47.0 | 5.18e-01 | 76.6% | 90.0% |
| 6uy8A01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.68 | 49.0 | 5.42e-01 | 75.3% | 98.3% |
| 2egeA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.68 | 48.0 | 4.92e-01 | 74.0% | 86.7% |
| 2k5fA01 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.68 | 49.0 | 4.81e-01 | 75.3% | 79.5% |
| 1udlA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.68 | 55.0 | 5.09e-01 | 88.3% | 82.7% |
| 1x43A01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.68 | 47.0 | 5.11e-01 | 72.7% | 93.5% |
| 2dlpA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.67 | 48.0 | 4.69e-01 | 75.3% | 71.8% |
| 2l3rA02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 48.0 | 4.94e-01 | 75.3% | 86.3% |
| 1awoA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.66 | 45.0 | 5.06e-01 | 74.0% | 96.5% |
| 1kq1H00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 43.0 | 4.60e-01 | 76.6% | 80.3% |
| 2egcA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.63 | 45.0 | 4.61e-01 | 75.3% | 80.0% |
| 4g54A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.63 | 41.0 | 3.50e-01 | 76.6% | 40.8% |
| 4h75A00 | 2.80.10.70 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › Spindlin/Ssty | 0.63 | 45.0 | 3.35e-01 | 75.3% | 31.2% |
| 2w1zA02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.58 | 45.0 | 3.73e-01 | 84.4% | 95.0% |
| 7e52A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.57 | 42.0 | 3.57e-01 | 79.2% | 93.8% |
| 5egwA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.56 | 49.0 | 3.20e-01 | 97.4% | 73.8% |
| 5j60B02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.56 | 42.0 | 3.63e-01 | 79.2% | 94.2% |
| 6epkA02 | 3.30.67.10 | Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 | 0.56 | 37.0 | 3.83e-01 | 80.5% | 73.2% |
| 2x4jA01 | 2.30.30.600 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 41.0 | 3.80e-01 | 94.8% | 60.8% |
| 1ei5A03 | 2.40.128.50 | Mainly Beta › Beta Barrel › Lipocalin › | 0.54 | 38.0 | 3.51e-01 | 74.0% | 98.0% |
| 4h0oA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.54 | 31.0 | 2.38e-01 | 87.0% | 23.0% |
| 3p54A02 | 3.30.67.10 | Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 | 0.53 | 36.0 | 3.76e-01 | 77.9% | 76.1% |
| 1okeB02 | 3.30.67.10 | Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 | 0.52 | 35.0 | 3.51e-01 | 79.2% | 70.1% |
| 1nr0A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 42.0 | 2.82e-01 | 90.9% | 97.7% |
| 3ifvC00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.50 | 41.0 | 3.03e-01 | 94.8% | 84.2% |
ECOD (83)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3500542 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.85 | 57.0 | 5.34e-01 | 75.3% | 58.9% |
| 3925408 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.83 | 52.0 | 6.33e-01 | 79.2% | 98.0% |
| 3586469 | 4.1.1.287 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5641 | 0.80 | 57.0 | 5.46e-01 | 75.3% | 65.9% |
| 4964768 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.80 | 55.0 | 6.17e-01 | 75.3% | 91.7% |
| 540 | 4.1.1.8 ↗ | beta barrels › SH3 › SH3 › SH3 › IN_DBD_C | 0.80 | 46.0 | 5.73e-01 | 70.1% | 93.8% |
| 4027263 | 4.1.1.104 ↗ | beta barrels › SH3 › SH3 › SH3 › KN17_SH3 | 0.79 | 54.0 | 4.58e-01 | 75.3% | 45.0% |
| 3370389 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.79 | 57.0 | 6.17e-01 | 75.3% | 93.8% |
| 3505711 | 4.1.1.287 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5641 | 0.79 | 56.0 | 5.44e-01 | 76.6% | 67.1% |
| 3333152 | 4.1.1.118 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_15 | 0.79 | 57.0 | 5.65e-01 | 75.3% | 72.5% |
| 598 | 4.1.1.68 ↗ | beta barrels › SH3 › SH3 › SH3 › YorP | 0.79 | 56.0 | 5.84e-01 | 75.3% | 80.3% |
| 4400641 | 4.1.1.397 ↗ | beta barrels › SH3 › SH3 › SH3 › PF29622 | 0.78 | 57.0 | 5.61e-01 | 75.3% | 93.8% |
| 3501560 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.78 | 56.0 | 5.33e-01 | 75.3% | 73.3% |
| 3750163 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.78 | 56.0 | 5.88e-01 | 75.3% | 82.9% |
| 2575643 | 4.1.1.8 ↗ | beta barrels › SH3 › SH3 › SH3 › IN_DBD_C | 0.77 | 47.0 | 5.00e-01 | 75.3% | 69.6% |
| 5037939 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.77 | 53.0 | 4.10e-01 | 75.3% | 35.5% |
| 3237640 | 4.1.1.287 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5641 | 0.76 | 55.0 | 4.83e-01 | 76.6% | 52.7% |
| 3503780 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.76 | 56.0 | 6.01e-01 | 76.6% | 90.8% |
| 3503782 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.76 | 53.0 | 5.91e-01 | 72.7% | 93.3% |
| 3846069 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.76 | 52.0 | 5.63e-01 | 71.4% | 84.6% |
| 4119802 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.76 | 53.0 | 5.71e-01 | 72.7% | 86.2% |
| 3723061 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 56.0 | 4.58e-01 | 77.9% | 96.3% |
| 3747208 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.75 | 51.0 | 5.07e-01 | 70.1% | 67.5% |
| 3542245 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.75 | 52.0 | 5.43e-01 | 71.4% | 78.6% |
| 3561013 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.75 | 55.0 | 5.57e-01 | 79.2% | 78.7% |
| 3599257 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 54.0 | 5.86e-01 | 76.6% | 92.3% |
| 3708644 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 55.0 | 4.78e-01 | 77.9% | 94.8% |
| 3623786 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.74 | 51.0 | 5.53e-01 | 72.7% | 84.6% |
| 3903323 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.74 | 52.0 | 5.28e-01 | 75.3% | 74.7% |
| 3914833 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.74 | 50.0 | 5.24e-01 | 70.1% | 80.0% |
| 3899829 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.74 | 52.0 | 5.26e-01 | 72.7% | 74.7% |
| 3573775 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.74 | 50.0 | 5.39e-01 | 70.1% | 83.1% |
| 2410170 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.74 | 51.0 | 5.58e-01 | 71.4% | 96.8% |
| 3920897 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.74 | 50.0 | 5.09e-01 | 70.1% | 77.3% |
| 3886646 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.74 | 51.0 | 5.54e-01 | 72.7% | 86.2% |
| 3537941 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.73 | 51.0 | 4.93e-01 | 71.4% | 69.4% |
| 3933965 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.73 | 50.0 | 5.68e-01 | 71.4% | 94.8% |
| 4602101 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.73 | 51.0 | 5.51e-01 | 72.7% | 95.4% |
| 3270547 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.73 | 51.0 | 5.49e-01 | 72.7% | 86.2% |
| 3748846 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.73 | 52.0 | 5.63e-01 | 77.9% | 89.2% |
| 4056584 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.73 | 59.0 | 5.82e-01 | 93.5% | 83.7% |
| 3929784 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 45.0 | 5.54e-01 | 70.1% | 98.0% |
| 3885695 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.72 | 51.0 | 5.03e-01 | 72.7% | 70.0% |
| 3900208 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.72 | 51.0 | 5.57e-01 | 75.3% | 89.1% |
| 3523046 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.72 | 51.0 | 4.91e-01 | 75.3% | 65.9% |
| 4226934 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.72 | 49.0 | 5.24e-01 | 76.6% | 83.1% |
| 3998645 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.72 | 52.0 | 5.59e-01 | 77.9% | 89.2% |
| 3269589 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.72 | 50.0 | 5.28e-01 | 72.7% | 80.0% |
| 1482194 | 4.1.1.96 ↗ | beta barrels › SH3 › SH3 › SH3 › Hfq | 0.72 | 47.0 | 5.18e-01 | 76.6% | 85.0% |
| 3267416 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.72 | 52.0 | 5.19e-01 | 76.6% | 73.8% |
| 3217113 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.71 | 51.0 | 5.54e-01 | 76.6% | 89.2% |
| 3914346 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.71 | 52.0 | 4.95e-01 | 76.6% | 65.6% |
| 4610859 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.71 | 50.0 | 5.40e-01 | 75.3% | 87.7% |
| 3561462 | 148.1.3.384 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › SH3_2 | 0.70 | 60.0 | 4.62e-01 | 97.4% | 42.4% |
| 4930563 | 4.1.1.40 ↗ | beta barrels › SH3 › SH3 › SH3 › FeoA | 0.70 | 50.0 | 5.23e-01 | 75.3% | 88.6% |
| 4660084 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.69 | 47.0 | 4.93e-01 | 76.6% | 78.3% |
| 4033110 | 4.1.1.40 ↗ | beta barrels › SH3 › SH3 › SH3 › FeoA | 0.69 | 50.0 | 5.06e-01 | 75.3% | 89.3% |
| 4973749 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 44.0 | 4.58e-01 | 76.6% | 70.0% |
| 4952214 | 4.1.1.40 ↗ | beta barrels › SH3 › SH3 › SH3 › FeoA | 0.69 | 49.0 | 5.03e-01 | 75.3% | 90.7% |
| 4940673 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 46.0 | 5.10e-01 | 76.6% | 88.3% |
| 5042313 | 4.1.1.40 ↗ | beta barrels › SH3 › SH3 › SH3 › FeoA | 0.69 | 49.0 | 5.01e-01 | 75.3% | 88.0% |
| 3525376 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.68 | 48.0 | 5.22e-01 | 74.0% | 89.2% |
| 3396740 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 50.0 | 4.64e-01 | 76.6% | 86.3% |
| 3567457 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.68 | 50.0 | 5.27e-01 | 77.9% | 91.4% |
| 3592766 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 55.0 | 4.52e-01 | 88.3% | 59.3% |
| 3519861 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 45.0 | 5.07e-01 | 75.3% | 88.3% |
| 3480204 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.68 | 50.0 | 5.39e-01 | 77.9% | 93.8% |
| 4215561 | 219.1.1.17 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1_2 | 0.68 | 60.0 | 3.71e-01 | 98.7% | 84.5% |
| 524 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.68 | 55.0 | 5.09e-01 | 88.3% | 82.7% |
| 3700872 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 55.0 | 5.33e-01 | 88.3% | 97.6% |
| 3482677 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 50.0 | 5.22e-01 | 77.9% | 87.1% |
| 3625909 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.67 | 51.0 | 5.03e-01 | 79.2% | 85.0% |
| 3995092 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.67 | 48.0 | 3.57e-01 | 76.6% | 32.0% |
| 3259043 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.66 | 49.0 | 5.18e-01 | 79.2% | 88.6% |
| 25838 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.65 | 49.0 | 4.92e-01 | 79.2% | 79.7% |
| 4359892 | 4.1.1.96 ↗ | beta barrels › SH3 › SH3 › SH3 › Hfq | 0.65 | 43.0 | 4.25e-01 | 77.9% | 65.0% |
| 3392327 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.64 | 49.0 | 3.43e-01 | 83.1% | 83.6% |
| 3940173 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.63 | 49.0 | 3.49e-01 | 83.1% | 88.0% |
| 5063537 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.63 | 44.0 | 4.98e-01 | 94.8% | 95.0% |
| 5045214 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 43.0 | 4.54e-01 | 76.6% | 84.3% |
| 4009391 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 46.0 | 4.60e-01 | 85.7% | 93.8% |
| 3736152 | 4.1.1.25 ↗ | beta barrels › SH3 › SH3 › SH3 › PAZ | 0.59 | 45.0 | 4.02e-01 | 81.8% | 83.5% |
| 3772106 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.57 | 49.0 | 3.46e-01 | 93.5% | 66.7% |
| 1868638 | 2003.1.2.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox | 0.54 | 40.0 | 3.52e-01 | 79.2% | 94.9% |
D2
high
residues 100-211
Domain cluster:
representative
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2h36X00 | 3.30.160.300 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.64 | 45.0 | 4.62e-01 | 74.1% | 75.0% |
| 1xn5A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.63 | 43.0 | 4.04e-01 | 70.5% | 69.6% |
| 3oh8A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.61 | 43.0 | 4.02e-01 | 72.3% | 79.3% |
| 7wa9A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.61 | 44.0 | 4.10e-01 | 75.0% | 78.7% |
| 3cnwA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.61 | 43.0 | 4.01e-01 | 73.2% | 75.9% |
| 2kf2A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.60 | 43.0 | 3.78e-01 | 74.1% | 67.7% |
| 6v04A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.60 | 43.0 | 4.12e-01 | 74.1% | 79.5% |
| 3wa5B00 | 2.60.120.1690 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 38.0 | 3.68e-01 | 78.6% | 57.3% |
| 1t17A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.59 | 41.0 | 3.79e-01 | 73.2% | 76.4% |
| 3rd6A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.58 | 42.0 | 3.88e-01 | 75.0% | 80.6% |
| 4esqA00 | 3.40.1000.70 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › PknH-like extracellular domain | 0.57 | 41.0 | 3.46e-01 | 74.1% | 69.6% |
| 2hesX00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.57 | 43.0 | 3.17e-01 | 80.4% | 95.1% |
| 3p51A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.57 | 41.0 | 3.81e-01 | 75.9% | 78.6% |
| 2mj7A00 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.55 | 40.0 | 3.76e-01 | 76.8% | 69.5% |
| 7snsB01 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 40.0 | 3.56e-01 | 75.9% | 82.7% |
| 3hlzB01 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.55 | 37.0 | 3.53e-01 | 70.5% | 63.6% |
| 2ix2B00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.55 | 40.0 | 3.12e-01 | 82.1% | 35.1% |
| 1pzdA02 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.54 | 39.0 | 3.93e-01 | 75.0% | 89.6% |
| 3vskA03 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.54 | 41.0 | 2.88e-01 | 80.4% | 76.3% |
| 4ztkA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.54 | 41.0 | 3.14e-01 | 81.2% | 71.3% |
| 2g30A02 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.53 | 39.0 | 3.86e-01 | 76.8% | 85.3% |
| 2hngA00 | 3.10.420.10 | Alpha Beta › Roll › Bacterial Protein-export protein SecB › SecB-like | 0.53 | 37.0 | 3.55e-01 | 80.4% | 64.0% |
| 3n0qA01 | 3.90.380.10 | Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 | 0.52 | 44.0 | 3.29e-01 | 91.1% | 75.5% |
| 2ldkA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 41.0 | 3.61e-01 | 85.7% | 83.7% |
| 6j8yC00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.52 | 39.0 | 3.03e-01 | 82.1% | 35.3% |
| 8f5pE01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 39.0 | 2.71e-01 | 80.4% | 96.9% |
| 4kqdB00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.52 | 36.0 | 3.59e-01 | 71.4% | 81.9% |
| 6twjA02 | 3.90.230.10 | Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily | 0.52 | 40.0 | 3.22e-01 | 83.0% | 70.0% |
| 6j8yA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.51 | 39.0 | 3.03e-01 | 82.1% | 36.6% |
| 7qu9A01 | 3.60.120.10 | Alpha Beta › 4-Layer Sandwich › Anthranilate synthase › Anthranilate synthase | 0.51 | 46.0 | 3.08e-01 | 100.0% | 79.2% |
| 2d4rA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 43.0 | 3.96e-01 | 92.0% | 95.9% |
| 4ydzA00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 41.0 | 3.93e-01 | 99.1% | 74.1% |
| 1x53A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.50 | 42.0 | 4.04e-01 | 91.1% | 91.6% |
| 4dkmA00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.50 | 44.0 | 3.64e-01 | 100.0% | 92.0% |
| 3h3hB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 35.0 | 3.43e-01 | 71.4% | 67.5% |
| 1dmlA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.50 | 38.0 | 2.94e-01 | 82.1% | 34.5% |
ECOD (54)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5051779 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.67 | 47.0 | 4.76e-01 | 71.4% | 77.3% |
| 4966638 | 881.1.1.44 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DUF6517 | 0.67 | 49.0 | 4.06e-01 | 76.8% | 52.8% |
| 3962288 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.66 | 48.0 | 4.56e-01 | 74.1% | 70.8% |
| 5004871 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.66 | 43.0 | 4.72e-01 | 73.2% | 81.1% |
| 3329883 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.66 | 33.0 | 3.40e-01 | 74.1% | 48.2% |
| 5009702 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.66 | 47.0 | 4.36e-01 | 74.1% | 78.6% |
| 3223629 | 331.15.1.0 ↗ | a+b two layers › TBP-like › Anti-CRISPR protein AcrID1 › Anti-CRISPR protein AcrID1 | 0.65 | 44.0 | 4.94e-01 | 74.1% | 90.6% |
| 3243860 | 331.15.1.4 ↗ | a+b two layers › TBP-like › Anti-CRISPR protein AcrID1 › Anti-CRISPR protein AcrID1 › FTH | 0.65 | 45.0 | 4.01e-01 | 75.9% | 51.0% |
| 3702663 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.65 | 45.0 | 4.08e-01 | 70.5% | 63.4% |
| 5040875 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.64 | 46.0 | 4.12e-01 | 74.1% | 68.4% |
| 3288437 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.63 | 46.0 | 4.20e-01 | 75.9% | 76.0% |
| 5021930 | 4312.1.1.22 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › PF27370 | 0.63 | 38.0 | 4.03e-01 | 79.5% | 67.0% |
| 3949576 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.63 | 45.0 | 4.00e-01 | 74.1% | 70.0% |
| 3960453 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.63 | 45.0 | 4.12e-01 | 74.1% | 77.2% |
| 4966099 | 331.3.1.5 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc | 0.62 | 44.0 | 3.90e-01 | 72.3% | 77.5% |
| 5038407 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.62 | 44.0 | 4.04e-01 | 74.1% | 75.3% |
| 3702434 | 331.3.1.3 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START | 0.62 | 44.0 | 3.44e-01 | 74.1% | 53.8% |
| 4302852 | 331.22.1.2 ↗ | a+b two layers › TBP-like › Outer membrane protein assembly factor BamC › Outer membrane protein assembly factor BamC › PF29358 | 0.62 | 42.0 | 3.60e-01 | 70.5% | 50.3% |
| 3477607 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.62 | 42.0 | 2.56e-01 | 70.5% | 96.9% |
| 4987226 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.61 | 44.0 | 4.02e-01 | 75.0% | 74.0% |
| 4928129 | 331.3.1.5 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc | 0.61 | 43.0 | 4.00e-01 | 73.2% | 77.2% |
| 3961758 | 331.3.1.7 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › COXG | 0.61 | 43.0 | 3.93e-01 | 73.2% | 75.3% |
| 4993408 | 331.3.1.9 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 | 0.60 | 43.0 | 3.86e-01 | 75.0% | 70.0% |
| 4992003 | 331.3.1.7 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › COXG | 0.60 | 43.0 | 4.04e-01 | 74.1% | 80.0% |
| 3713198 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.60 | 41.0 | 3.76e-01 | 71.4% | 65.2% |
| 3600592 | 223.2.1.20 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_1 | 0.59 | 42.0 | 3.53e-01 | 72.3% | 56.7% |
| 3947246 | 331.3.1.19 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VanA_C | 0.59 | 48.0 | 4.01e-01 | 89.3% | 89.0% |
| 5078475 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.58 | 43.0 | 3.98e-01 | 77.7% | 64.1% |
| 3884984 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.58 | 41.0 | 3.95e-01 | 71.4% | 76.0% |
| 3702931 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.58 | 48.0 | 4.24e-01 | 88.4% | 88.1% |
| 3678165 | 304.112.1.1 ↗ | a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain › ArgoL1 | 0.57 | 40.0 | 3.35e-01 | 71.4% | 56.8% |
| 3954338 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.57 | 42.0 | 3.64e-01 | 78.6% | 68.1% |
| 3230405 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.57 | 41.0 | 2.80e-01 | 75.9% | 49.5% |
| 5062234 | 331.9.1.0 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain | 0.56 | 43.0 | 4.29e-01 | 82.1% | 78.3% |
| 3602292 | 504.1.1.0 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB | 0.56 | 33.0 | 3.59e-01 | 75.0% | 69.5% |
| 1140712 | 331.9.1.2 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › B2-adapt-app_C | 0.55 | 40.0 | 3.88e-01 | 76.8% | 74.6% |
| 3506274 | 331.2.1.7 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM1_C_vert_fung | 0.55 | 38.0 | 3.75e-01 | 73.2% | 72.8% |
| 4984607 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.54 | 43.0 | 4.68e-01 | 86.6% | 98.9% |
| 3242479 | 2484.1.1.190 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FBA_2 | 0.54 | 39.0 | 2.94e-01 | 75.0% | 30.2% |
| 3967521 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.54 | 44.0 | 4.06e-01 | 89.3% | 96.7% |
| 3624850 | 331.9.1.9 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › PF26171 | 0.54 | 39.0 | 4.00e-01 | 75.0% | 83.8% |
| 3782242 | 331.9.1.4 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › Coatomer_g_Cpla | 0.53 | 38.0 | 3.88e-01 | 74.1% | 88.2% |
| 5009499 | 331.3.1.7 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › COXG | 0.53 | 44.0 | 4.16e-01 | 89.3% | 94.1% |
| 6331 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.53 | 44.0 | 4.21e-01 | 89.3% | 91.7% |
| 3352272 | 331.9.1.2 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › B2-adapt-app_C | 0.53 | 39.0 | 3.89e-01 | 76.8% | 85.2% |
| 3536489 | 331.9.1.5 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › AP4E_app_platf | 0.53 | 38.0 | 3.93e-01 | 75.0% | 84.8% |
| 3931614 | 331.9.1.2 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › B2-adapt-app_C | 0.53 | 38.0 | 3.85e-01 | 76.8% | 85.2% |
| 3763927 | 331.9.1.9 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › PF26171 | 0.52 | 38.0 | 3.84e-01 | 75.0% | 83.5% |
| 3941583 | 331.3.1.26 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF2867 | 0.52 | 44.0 | 4.05e-01 | 92.9% | 94.7% |
| 5050481 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.52 | 37.0 | 3.51e-01 | 74.1% | 76.3% |
| 3291529 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.52 | 37.0 | 3.76e-01 | 73.2% | 76.9% |
| 3726153 | 304.112.1.1 ↗ | a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain › ArgoL1 | 0.52 | 37.0 | 3.09e-01 | 73.2% | 54.4% |
| 3256904 | 227.1.1.12 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 | 0.51 | 39.0 | 3.79e-01 | 83.0% | 72.8% |
| 3287572 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.51 | 38.0 | 3.30e-01 | 82.1% | 60.0% |
D3
high
residues 229-345
Domain cluster:
rep: MH884511.1__AYP68649.1__EalM132_00137__00135__D328-433
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF10263.16 best | SprT-like | 28.2 | 2.10e-06 | 88.9% | 60.8% |
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4jiuA00 | 3.30.2010.10 | Alpha Beta › 2-Layer Sandwich › Zincin-like › "Metalloproteases (""zincins""), catalytic domain" | 0.83 | 63.0 | 6.69e-01 | 96.6% | 88.6% |
| 4wz9A02 | 1.10.390.10 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 | 0.70 | 65.0 | 4.94e-01 | 100.0% | 65.0% |
| 7y7oA01 | 3.40.390.30 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › "Metalloproteases (""zincins""), catalytic domain" | 0.68 | 61.0 | 5.76e-01 | 100.0% | 95.1% |
| 3e11A00 | 3.30.2010.20 | Alpha Beta › 2-Layer Sandwich › Zincin-like › | 0.67 | 57.0 | 5.85e-01 | 96.6% | 95.6% |
| 1oj4A01 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.67 | 49.0 | 4.42e-01 | 100.0% | 55.2% |
| 3hbvP01 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.67 | 54.0 | 5.09e-01 | 85.5% | 74.6% |
| 2gs8A01 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.66 | 46.0 | 3.99e-01 | 100.0% | 47.2% |
| 3hulB01 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.66 | 46.0 | 4.15e-01 | 100.0% | 53.5% |
| 4p52A01 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.63 | 47.0 | 4.13e-01 | 100.0% | 51.7% |
| 1j7nA01 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.61 | 54.0 | 4.39e-01 | 98.3% | 80.6% |
| 4hacB01 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.61 | 47.0 | 4.09e-01 | 99.1% | 53.6% |
| 1lmlA01 | 3.10.170.20 | Alpha Beta › Roll › Elastase; domain 1 › | 0.60 | 46.0 | 4.05e-01 | 80.3% | 72.4% |
| 3c4nA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.60 | 44.0 | 3.54e-01 | 77.8% | 95.3% |
| 1c0pA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.60 | 46.0 | 3.87e-01 | 82.1% | 93.0% |
| 6q3wD01 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.59 | 48.0 | 4.07e-01 | 100.0% | 53.5% |
| 2xlpB01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.58 | 52.0 | 3.74e-01 | 99.1% | 82.0% |
| 2ab0A00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.58 | 52.0 | 4.39e-01 | 98.3% | 92.8% |
| 8gf5C01 | 3.30.70.470 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 48.0 | 4.56e-01 | 98.3% | 87.3% |
| 4paaA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.54 | 45.0 | 3.52e-01 | 88.9% | 80.8% |
| 7dfeA01 | 1.10.274.60 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, repetitive domain | 0.54 | 38.0 | 3.78e-01 | 95.7% | 68.5% |
| 3kmuA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.53 | 39.0 | 3.43e-01 | 76.1% | 79.9% |
| 2qcuB01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.53 | 44.0 | 3.59e-01 | 92.3% | 93.4% |
| 1k9fA01 | 3.30.379.10 | Alpha Beta › 2-Layer Sandwich › Chitobiase; domain 2 › Chitobiase/beta-hexosaminidase domain 2-like | 0.52 | 45.0 | 4.48e-01 | 100.0% | 90.4% |
| 1o22A00 | 3.90.1000.10 | Alpha Beta › Alpha-Beta Complex › Orphan Protein Tm0875; Chain: A; › Hypothetical protein TM0875 | 0.52 | 42.0 | 3.96e-01 | 89.7% | 96.6% |
| 3r7wA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 40.0 | 3.49e-01 | 82.9% | 95.1% |
| 3c18A01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.51 | 32.0 | 3.27e-01 | 74.4% | 61.7% |
| 1gqiA01 | 3.30.379.10 | Alpha Beta › 2-Layer Sandwich › Chitobiase; domain 2 › Chitobiase/beta-hexosaminidase domain 2-like | 0.51 | 44.0 | 4.27e-01 | 99.1% | 86.3% |
| 2dx6A00 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.50 | 38.0 | 3.48e-01 | 81.2% | 85.4% |
ECOD (48)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4967994 | 2498.1.1.17 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YgjP-like | 0.84 | 59.0 | 6.63e-01 | 96.6% | 93.3% |
| 1030676 | 2498.1.1.17 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YgjP-like | 0.83 | 63.0 | 6.69e-01 | 96.6% | 88.6% |
| 4988454 | 2498.1.1.17 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YgjP-like | 0.82 | 64.0 | 6.93e-01 | 98.3% | 95.0% |
| 4942840 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.81 | 61.0 | 6.40e-01 | 96.6% | 86.7% |
| 5011816 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.76 | 67.0 | 6.49e-01 | 94.0% | 84.6% |
| 3435061 | 2498.1.1.72 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › BSP | 0.76 | 70.0 | 5.56e-01 | 99.1% | 57.3% |
| 4991663 | 2498.1.1.49 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › PhageMetallopep | 0.76 | 67.0 | 6.53e-01 | 96.6% | 87.2% |
| 5080625 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.76 | 56.0 | 5.65e-01 | 100.0% | 77.4% |
| 3242920 | 2498.1.1.39 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › SprT-like | 0.76 | 69.0 | 6.28e-01 | 100.0% | 76.0% |
| 5057982 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.75 | 70.0 | 5.80e-01 | 100.0% | 65.1% |
| 3390011 | 2498.1.1.39 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › SprT-like | 0.74 | 66.0 | 5.34e-01 | 100.0% | 52.9% |
| 4083592 | 212.1.1.3 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › GHMP_kinases_N | 0.74 | 52.0 | 4.60e-01 | 100.0% | 50.9% |
| 4969796 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.74 | 50.0 | 5.35e-01 | 100.0% | 80.0% |
| 3193512 | 2498.1.1.72 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › BSP | 0.73 | 67.0 | 5.30e-01 | 100.0% | 64.3% |
| 3509435 | 2498.1.1.39 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › SprT-like | 0.72 | 64.0 | 6.19e-01 | 95.7% | 97.7% |
| 5061806 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.72 | 65.0 | 6.55e-01 | 99.1% | 97.4% |
| 5065493 | 2498.1.1.10 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M48 | 0.69 | 63.0 | 6.01e-01 | 100.0% | 93.3% |
| 5058128 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.68 | 62.0 | 5.28e-01 | 100.0% | 70.5% |
| 3731317 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.68 | 62.0 | 4.89e-01 | 100.0% | 59.6% |
| 4986343 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.68 | 59.0 | 4.71e-01 | 95.7% | 87.7% |
| 4511318 | 2498.1.1.26 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M56 | 0.68 | 63.0 | 4.81e-01 | 100.0% | 51.6% |
| 4279213 | 2498.1.1.22 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YbeY | 0.67 | 60.0 | 5.82e-01 | 96.6% | 93.1% |
| 5076658 | 2498.1.1.26 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M56 | 0.67 | 62.0 | 4.79e-01 | 100.0% | 52.4% |
| 3240437 | 2498.1.1.93 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › PF29156 | 0.67 | 61.0 | 4.57e-01 | 100.0% | 63.2% |
| 3281177 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.66 | 60.0 | 5.10e-01 | 98.3% | 90.3% |
| 3995417 | 2498.1.1.93 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › PF29156 | 0.66 | 58.0 | 4.30e-01 | 99.1% | 68.9% |
| 4961903 | 2498.1.1.29 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M78 | 0.65 | 56.0 | 5.24e-01 | 96.6% | 76.4% |
| 5001215 | 212.1.1.3 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › GHMP_kinases_N | 0.65 | 49.0 | 4.31e-01 | 100.0% | 54.1% |
| 3285500 | 2498.1.1.1 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M10 | 0.65 | 58.0 | 5.13e-01 | 97.4% | 68.5% |
| 4486950 | 2498.1.1.10 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M48 | 0.65 | 59.0 | 4.13e-01 | 99.1% | 58.9% |
| 4965419 | 2498.1.1.165 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › DUF7089 | 0.65 | 59.0 | 4.53e-01 | 100.0% | 84.2% |
| 4301891 | 2498.1.1.10 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M48 | 0.65 | 59.0 | 4.34e-01 | 99.1% | 55.9% |
| 4961836 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.64 | 55.0 | 5.17e-01 | 96.6% | 76.4% |
| 3290701 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.64 | 54.0 | 5.05e-01 | 96.6% | 73.8% |
| 3290622 | 2498.1.1.48 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M91 | 0.64 | 59.0 | 5.12e-01 | 100.0% | 93.7% |
| 5046934 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.64 | 55.0 | 5.36e-01 | 95.7% | 99.2% |
| 3719352 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.63 | 48.0 | 3.67e-01 | 82.1% | 90.5% |
| 3514744 | 2498.1.1.11 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M48,Peptidase_M48_N | 0.62 | 57.0 | 3.91e-01 | 100.0% | 43.8% |
| 3613037 | 2004.1.1.208 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_33 | 0.62 | 48.0 | 3.73e-01 | 82.1% | 90.0% |
| 5057933 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.62 | 53.0 | 5.07e-01 | 100.0% | 81.5% |
| 5057374 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.61 | 55.0 | 5.24e-01 | 99.1% | 91.1% |
| 11480 | 2498.1.1.34 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › ATLF | 0.61 | 54.0 | 4.30e-01 | 98.3% | 75.5% |
| 5084004 | 212.1.1.0 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like | 0.60 | 52.0 | 4.32e-01 | 100.0% | 54.9% |
| 4965315 | 212.1.1.3 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › GHMP_kinases_N | 0.60 | 49.0 | 4.04e-01 | 100.0% | 49.0% |
| 3636118 | 212.1.1.4 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › GHMP_kinases_N,GalKase_gal_bdg | 0.55 | 51.0 | 3.97e-01 | 100.0% | 47.8% |
| 4051075 | 2498.2.1.2 ↗ | mixed a+b and a/b › Zincin-like › beta-N-acetylhexosaminidase-like domain › beta-N-acetylhexosaminidase-like domain › Glyco_hydro_67N | 0.54 | 44.0 | 4.29e-01 | 100.0% | 80.8% |
| None | — | 0.53 | 41.0 | 2.78e-01 | 83.8% | 52.9% | |
| 3545094 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 39.0 | 3.37e-01 | 82.9% | 90.8% |