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LacPavin_0818_WC40_scaffold_75050_prodigal-single.1__X__X__00074
Bact-VirLacPavin_0818_WC40_scaffold_75050_prodigal-single.1__X__X__00074
Identity
- Kingdom:
- phage
Quality
58.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 92-163
Domain cluster:
representative
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3dupA02 | 3.30.750.160 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › | 0.66 | 49.0 | 4.34e-01 | 86.1% | 54.7% |
| 1bjaA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 48.0 | 4.43e-01 | 84.7% | 86.3% |
| 1y0uA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 46.0 | 4.28e-01 | 80.6% | 66.3% |
| 1lnwF01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 46.0 | 3.93e-01 | 86.1% | 66.9% |
| 2phcB01 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.59 | 51.0 | 4.89e-01 | 95.8% | 92.8% |
| 3ecoB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 45.0 | 3.77e-01 | 86.1% | 51.9% |
| 5zyrA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 45.0 | 3.60e-01 | 87.5% | 43.7% |
| 2ns6A00 | 3.30.930.30 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › | 0.57 | 50.0 | 3.78e-01 | 100.0% | 97.3% |
| 2bgcA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 46.0 | 4.20e-01 | 91.7% | 81.2% |
| 3k4oA00 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.57 | 36.0 | 2.51e-01 | 70.8% | 17.3% |
| 3e9lA02 | 1.20.80.40 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › Prp8 RNase H domain, fingers region | 0.57 | 41.0 | 3.83e-01 | 98.6% | 60.0% |
| 2lm0A01 | 1.20.1270.290 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.56 | 41.0 | 3.76e-01 | 98.6% | 58.3% |
| 2x4hA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 45.0 | 3.78e-01 | 91.7% | 76.7% |
| 3f6tA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.54 | 45.0 | 3.64e-01 | 94.4% | 65.5% |
| 5y2vC01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 43.0 | 4.16e-01 | 90.3% | 82.4% |
| 2esnA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 43.0 | 4.06e-01 | 90.3% | 77.5% |
| 3szpA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 43.0 | 4.04e-01 | 91.7% | 77.5% |
| 1e25A00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.52 | 40.0 | 2.76e-01 | 84.7% | 49.3% |
| 4xt1A00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.52 | 41.0 | 2.79e-01 | 87.5% | 34.7% |
| 6g1dA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 43.0 | 4.18e-01 | 95.8% | 89.0% |
| 2vlaA03 | 1.10.10.2090 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.52 | 44.0 | 3.85e-01 | 100.0% | 96.7% |
| 4id8A00 | 3.30.70.20 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 36.0 | 3.72e-01 | 93.1% | 80.0% |
| 5ljmA00 | 1.20.58.2190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 43.0 | 3.28e-01 | 100.0% | 69.0% |
| 4hv0C00 | 1.10.1220.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like | 0.51 | 39.0 | 3.74e-01 | 86.1% | 96.6% |
| 2v4jA04 | 3.30.70.20 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 41.0 | 4.01e-01 | 93.1% | 82.1% |
| 2yykA01 | 1.10.3140.10 | Mainly Alpha › Orthogonal Bundle › 4-hydroxybutyryl-coa dehydratase, domain 1 › 4-hydroxybutyryl-coa dehydratase, domain 1 | 0.51 | 39.0 | 3.24e-01 | 84.7% | 67.9% |
| 7cfmR01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.51 | 41.0 | 2.94e-01 | 97.2% | 96.2% |
| 2mhhA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.50 | 39.0 | 3.63e-01 | 87.5% | 79.2% |
ECOD (37)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3262307 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.61 | 39.0 | 4.33e-01 | 79.2% | 83.6% |
| 3627133 | 101.1.2.309 ↗ | alpha arrays › HTH › HTH › winged helix domain › GPAT_C | 0.59 | 50.0 | 3.74e-01 | 95.8% | 43.7% |
| 4232234 | 101.1.2.309 ↗ | alpha arrays › HTH › HTH › winged helix domain › GPAT_C | 0.59 | 49.0 | 3.67e-01 | 94.4% | 45.3% |
| 4560206 | 101.1.2.309 ↗ | alpha arrays › HTH › HTH › winged helix domain › GPAT_C | 0.58 | 45.0 | 4.24e-01 | 86.1% | 93.3% |
| 3984604 | 7558.1.1.10 ↗ | a/b three-layered sandwiches › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › GPAT_C | 0.58 | 47.0 | 4.41e-01 | 94.4% | 90.5% |
| 3164063 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.58 | 48.0 | 4.92e-01 | 100.0% | 95.7% |
| 4969567 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 45.0 | 4.36e-01 | 87.5% | 81.2% |
| 4987026 | 205.1.1.0 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin | 0.58 | 42.0 | 4.00e-01 | 98.6% | 65.9% |
| 4028199 | 3860.1.1.155 ↗ | alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm › RIFIN | 0.58 | 39.0 | 2.80e-01 | 100.0% | 23.2% |
| 139099 | 7531.1.1.1 ↗ | a/b three-layered sandwiches › Carbamate kinase-like › Carbamate kinase-like › Carbamate kinase-like › AA_kinase | 0.57 | 36.0 | 2.51e-01 | 70.8% | 17.3% |
| 4938467 | 205.1.1.33 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_10 | 0.57 | 45.0 | 4.59e-01 | 100.0% | 91.4% |
| 5062774 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 50.0 | 3.85e-01 | 100.0% | 92.1% |
| 5004297 | 4275.1.1.0 ↗ | alpha arrays › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like | 0.55 | 42.0 | 3.74e-01 | 94.4% | 56.2% |
| 4310372 | 101.1.2.309 ↗ | alpha arrays › HTH › HTH › winged helix domain › GPAT_C | 0.55 | 46.0 | 3.50e-01 | 95.8% | 48.1% |
| 4933930 | 101.1.2.30 ↗ | alpha arrays › HTH › HTH › winged helix domain › TrmB | 0.55 | 46.0 | 4.51e-01 | 95.8% | 85.0% |
| 4964823 | 101.1.2.929 ↗ | alpha arrays › HTH › HTH › winged helix domain › HVO_2833_C | 0.55 | 44.0 | 3.18e-01 | 90.3% | 67.0% |
| 3252459 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.55 | 42.0 | 3.15e-01 | 84.7% | 60.0% |
| 5017858 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.55 | 43.0 | 3.46e-01 | 86.1% | 52.4% |
| 3267934 | 3525.1.1.1 ↗ | alpha arrays › Bromodomain-containing protein 4 ET domain › Bromodomain-containing protein 4 ET domain › Bromodomain-containing protein 4 ET domain › BET | 0.54 | 42.0 | 4.41e-01 | 98.6% | 96.9% |
| 3501177 | 205.1.1.0 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin | 0.54 | 36.0 | 3.86e-01 | 98.6% | 85.0% |
| 4050309 | 101.1.2.169 ↗ | alpha arrays › HTH › HTH › winged helix domain › PheRS_DBD3 | 0.53 | 40.0 | 4.03e-01 | 100.0% | 80.0% |
| 4605698 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.53 | 48.0 | 4.44e-01 | 100.0% | 79.6% |
| 3456656 | 3525.1.1.1 ↗ | alpha arrays › Bromodomain-containing protein 4 ET domain › Bromodomain-containing protein 4 ET domain › Bromodomain-containing protein 4 ET domain › BET | 0.53 | 42.0 | 4.37e-01 | 98.6% | 98.5% |
| 3957678 | 205.1.1.20 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_15 | 0.53 | 36.0 | 3.80e-01 | 93.1% | 83.3% |
| 3718509 | 2004.1.1.71 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › IPPT | 0.53 | 43.0 | 2.88e-01 | 100.0% | 20.6% |
| 3989440 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.53 | 44.0 | 4.13e-01 | 95.8% | 81.1% |
| 5013911 | 1075.5.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › MatE | 0.53 | 41.0 | 2.93e-01 | 86.1% | 83.0% |
| 4370713 | 131.1.1.4 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD,HD_assoc | 0.52 | 46.0 | 2.91e-01 | 100.0% | 19.0% |
| 1503525 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.52 | 41.0 | 2.79e-01 | 87.5% | 34.7% |
| 3945660 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.52 | 42.0 | 4.03e-01 | 93.1% | 82.4% |
| 4181610 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 45.0 | 3.91e-01 | 100.0% | 88.7% |
| 4586833 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.52 | 47.0 | 4.29e-01 | 100.0% | 78.7% |
| 3968802 | 3831.1.1.1 ↗ | alpha bundles › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › LprI | 0.51 | 43.0 | 3.97e-01 | 98.6% | 70.4% |
| 3781664 | 226.1.1.0 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain | 0.51 | 43.0 | 3.26e-01 | 98.6% | 72.8% |
| 4228409 | 109.4.1.920 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_Maestro_2 | 0.51 | 42.0 | 2.76e-01 | 97.2% | 19.7% |
| 4025595 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.51 | 40.0 | 4.18e-01 | 90.3% | 95.4% |
| 4939027 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.50 | 43.0 | 3.69e-01 | 98.6% | 63.3% |
D2
high
residues 201-285
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3go5A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 41.0 | 4.51e-01 | 71.8% | 72.9% |
| 1cukA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 37.0 | 4.11e-01 | 70.6% | 77.3% |
| 3fssA01 | 2.30.29.120 | Mainly Beta › Roll › PH-domain like › | 0.58 | 52.0 | 4.47e-01 | 100.0% | 94.1% |
| 2eqsA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 39.0 | 3.91e-01 | 70.6% | 68.5% |
| 1z1bA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.57 | 31.0 | 3.55e-01 | 78.8% | 75.4% |
| 1yw5A01 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.53 | 31.0 | 3.50e-01 | 94.1% | 77.8% |
| 4rbnA01 | 3.10.450.330 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 35.0 | 3.09e-01 | 97.6% | 47.3% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4023576 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.64 | 44.0 | 4.27e-01 | 70.6% | 67.4% |
| 3875189 | 2.1.1.177 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1_RRP5 | 0.63 | 44.0 | 4.15e-01 | 75.3% | 61.0% |
| 4027740 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.63 | 43.0 | 4.09e-01 | 71.8% | 60.0% |
| 4930465 | 4294.1.1.0 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like | 0.61 | 35.0 | 4.08e-01 | 100.0% | 80.0% |
| 3899842 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 40.0 | 4.10e-01 | 71.8% | 69.4% |
| 5081146 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 38.0 | 3.81e-01 | 71.8% | 62.9% |
| 4004358 | 252.2.1.3 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › Arm-DNA-bind_1 | 0.59 | 32.0 | 3.84e-01 | 76.5% | 86.0% |
| 3207719 | 2002.1.1.262 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › SGT1 | 0.56 | 42.0 | 3.37e-01 | 100.0% | 38.9% |
| 3178269 | 206.1.2.4 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › SAICAR synthase › Ins_P5_2-kin | 0.56 | 42.0 | 2.97e-01 | 81.2% | 92.4% |
| 4021277 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.55 | 41.0 | 2.69e-01 | 78.8% | 35.9% |
| 4179501 | 292.2.1.4 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › Polo_box_2 | 0.55 | 44.0 | 4.03e-01 | 95.3% | 65.0% |
| 4991717 | 2488.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot | 0.54 | 45.0 | 3.90e-01 | 97.6% | 80.0% |
| 3222419 | 331.23.1.0 ↗ | a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain | 0.54 | 30.0 | 3.14e-01 | 100.0% | 57.3% |
| 4284025 | 206.1.2.4 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › SAICAR synthase › Ins_P5_2-kin | 0.53 | 40.0 | 2.86e-01 | 81.2% | 92.2% |
| 1320090 | 206.1.1.24 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › HipA_C,Couple_hipA | 0.51 | 44.0 | 2.87e-01 | 100.0% | 52.9% |
D3
high
residues 706-861
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2xmoA02 | 1.10.246.180 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.68 | 35.0 | 4.63e-01 | 87.8% | 89.5% |
| 4wz9A02 | 1.10.390.10 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 | 0.65 | 53.0 | 4.46e-01 | 85.9% | 74.8% |
| 4ioeA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.64 | 32.0 | 4.18e-01 | 97.4% | 85.1% |
| 6bmeA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.63 | 41.0 | 4.49e-01 | 96.2% | 79.5% |
| 4dxwA02 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.61 | 42.0 | 4.89e-01 | 99.4% | 98.2% |
| 5e3xA00 | 1.10.1370.30 | Mainly Alpha › Orthogonal Bundle › Neurolysin; domain 3 › | 0.60 | 51.0 | 3.62e-01 | 92.9% | 50.1% |
| 4od4A02 | 1.20.120.1780 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › UbiA prenyltransferase | 0.58 | 31.0 | 3.47e-01 | 85.3% | 64.7% |
| 1j1vA00 | 1.10.1750.10 | Mainly Alpha › Orthogonal Bundle › Chromosomal Replication Initiator Protein Dnaa; Chain: A; › DnaA protein, C-terminal DNA-binding domain | 0.55 | 33.0 | 4.18e-01 | 88.5% | 100.0% |
| 2xubA05 | 6.10.140.1450 | Special › Helix non-globular › Helix Hairpins › | 0.54 | 32.0 | 3.95e-01 | 96.8% | 94.8% |
| 3g2eB00 | 3.40.920.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III | 0.53 | 40.0 | 3.82e-01 | 78.8% | 78.4% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5024540 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.82 | 72.0 | 7.50e-01 | 94.9% | 97.9% |
| 3589463 | 2498.1.1.29 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M78 | 0.81 | 75.0 | 7.56e-01 | 96.2% | 100.0% |
| None | — | 0.72 | 51.0 | 4.43e-01 | 72.4% | 72.2% | |
| 4952523 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.71 | 63.0 | 5.34e-01 | 93.6% | 63.7% |
| 5004191 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.68 | 53.0 | 4.79e-01 | 81.4% | 85.2% |
| 4630084 | 192.10.1.0 ↗ | alpha bundles › Long alpha-hairpin › DnaK suppressor protein DksA, alpha-hairpin domain › DnaK suppressor protein DksA, alpha-hairpin domain | 0.66 | 33.0 | 4.25e-01 | 94.9% | 82.2% |
| 3928509 | 2498.1.1.9 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M1 | 0.66 | 54.0 | 4.30e-01 | 85.9% | 77.0% |
| 5045924 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.65 | 53.0 | 4.85e-01 | 84.6% | 73.0% |
| 3239825 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.64 | 52.0 | 4.50e-01 | 85.9% | 70.8% |
| 3589965 | 2498.1.1.29 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M78 | 0.64 | 51.0 | 5.53e-01 | 83.3% | 97.0% |
| 3414358 | 2498.1.1.9 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M1 | 0.64 | 54.0 | 4.57e-01 | 87.8% | 69.0% |
| 5057982 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.63 | 52.0 | 4.79e-01 | 85.9% | 77.9% |
| 3969025 | 2498.1.1.65 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › MATCAP | 0.63 | 54.0 | 3.97e-01 | 91.7% | 59.2% |
| 5063756 | 2498.1.1.9 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M1 | 0.62 | 51.0 | 4.58e-01 | 85.3% | 71.9% |
| 5045375 | 2498.1.1.9 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M1 | 0.62 | 51.0 | 4.42e-01 | 86.5% | 73.6% |
| 5064807 | 2498.1.1.9 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M1 | 0.61 | 51.0 | 4.48e-01 | 87.8% | 72.0% |
| 3291494 | 2498.1.1.9 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M1 | 0.60 | 49.0 | 4.17e-01 | 85.9% | 66.1% |
| 3224086 | 188.1.1.1 ↗ | alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Hormone_recep | 0.59 | 47.0 | 4.04e-01 | 85.9% | 82.0% |
| 3956826 | 150.8.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › PPE › PPE | 0.59 | 33.0 | 3.20e-01 | 95.5% | 49.4% |
| 5073599 | 4156.1.1.1 ↗ | alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 | 0.56 | 38.0 | 4.11e-01 | 89.7% | 82.3% |
| 4954771 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.55 | 43.0 | 4.22e-01 | 82.7% | 93.5% |
| 3733319 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.54 | 33.0 | 3.75e-01 | 88.5% | 81.7% |
| 3262272 | 101.1.10.6 ↗ | alpha arrays › HTH › HTH › Cyclin-like › RB_A | 0.54 | 45.0 | 3.99e-01 | 90.4% | 74.2% |
| 3991252 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.53 | 41.0 | 4.02e-01 | 81.4% | 79.4% |
D4
medium
residues 429-517
Domain cluster:
representative
CATH (40)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2fwrA01 | 3.40.1170.30 | Alpha Beta › 3-Layer(aba) Sandwich › MutS, DNA mismatch repair protein, domain I › | 0.80 | 47.0 | 5.84e-01 | 82.0% | 93.0% |
| 4uoiC00 | 3.30.160.890 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Hepatitis C virus envelope glycoprotein E1, chain C | 0.76 | 20.0 | 2.70e-01 | 73.0% | 39.2% |
| 3va7A05 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.67 | 54.0 | 5.28e-01 | 91.0% | 87.0% |
| 2dy1A03 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.66 | 45.0 | 4.76e-01 | 74.2% | 81.6% |
| 4gvbA00 | 3.30.70.440 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Killer toxin KP6 alpha-subunit | 0.65 | 42.0 | 4.45e-01 | 75.3% | 75.3% |
| 2dt9A01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.63 | 49.0 | 5.21e-01 | 85.4% | 100.0% |
| 1zhvA00 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.63 | 49.0 | 4.27e-01 | 83.1% | 91.0% |
| 6fyqA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.62 | 48.0 | 3.87e-01 | 83.1% | 51.7% |
| 5o5cB02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.62 | 47.0 | 4.27e-01 | 83.1% | 65.6% |
| 6torA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.62 | 50.0 | 4.33e-01 | 89.9% | 60.4% |
| 4ritA01 | 3.90.1150.170 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.61 | 48.0 | 3.63e-01 | 86.5% | 37.8% |
| 3aawA02 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.60 | 49.0 | 4.03e-01 | 88.8% | 95.2% |
| 5g4iB01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.60 | 49.0 | 4.07e-01 | 89.9% | 53.1% |
| 3n5mB01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.60 | 48.0 | 3.92e-01 | 89.9% | 50.6% |
| 3ezjA03 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.60 | 37.0 | 4.35e-01 | 74.2% | 98.2% |
| 3oksA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.59 | 47.0 | 3.86e-01 | 88.8% | 47.2% |
| 3l44A01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.59 | 48.0 | 3.88e-01 | 91.0% | 48.1% |
| 4q6rA02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.59 | 46.0 | 4.08e-01 | 86.5% | 58.0% |
| 3nuiA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.58 | 46.0 | 3.96e-01 | 86.5% | 59.6% |
| 7ykvB02 | 3.10.310.30 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.58 | 47.0 | 4.52e-01 | 89.9% | 77.2% |
| 1zodA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.58 | 46.0 | 4.07e-01 | 89.9% | 62.4% |
| 3dxvA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.58 | 46.0 | 3.98e-01 | 89.9% | 55.9% |
| 5i92F01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.58 | 46.0 | 3.78e-01 | 89.9% | 49.4% |
| 8dy9I01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.56 | 45.0 | 3.50e-01 | 89.9% | 91.3% |
| 3nx3A01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.55 | 42.0 | 3.71e-01 | 89.9% | 53.2% |
| 3dodB01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.55 | 44.0 | 3.67e-01 | 89.9% | 51.2% |
| 3wpwA00 | 3.30.1330.60 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain | 0.55 | 38.0 | 3.26e-01 | 73.0% | 89.9% |
| 6j9eJ00 | 3.30.160.560 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.55 | 34.0 | 3.79e-01 | 85.4% | 83.3% |
| 2dmwA01 | 3.30.450.50 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin domain | 0.54 | 42.0 | 3.87e-01 | 84.3% | 99.1% |
| 2ehbD00 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.54 | 39.0 | 3.57e-01 | 78.7% | 84.9% |
| 3cjnA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 45.0 | 3.86e-01 | 95.5% | 62.3% |
| 3ossD00 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.53 | 39.0 | 3.28e-01 | 78.7% | 73.9% |
| 2e9hA01 | 3.30.30.170 | Alpha Beta › 2-Layer Sandwich › Defensin A-like › | 0.53 | 44.0 | 4.19e-01 | 97.8% | 85.8% |
| 4huzA01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.53 | 36.0 | 3.05e-01 | 73.0% | 73.5% |
| 2kkhA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 36.0 | 3.81e-01 | 74.2% | 84.0% |
| 5b7gA00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.53 | 44.0 | 3.37e-01 | 100.0% | 72.3% |
| 1weyA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.52 | 37.0 | 3.60e-01 | 75.3% | 67.3% |
| 1s12A00 | 3.30.70.1490 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp | 0.51 | 40.0 | 3.96e-01 | 85.4% | 80.9% |
| 6mv2A01 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 38.0 | 3.74e-01 | 83.1% | 95.1% |
| 2cjgA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.51 | 45.0 | 3.78e-01 | 100.0% | 73.4% |
ECOD (46)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4991995 | 3696.1.1.2 ↗ | a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › XPB_DRD | 0.81 | 51.0 | 5.87e-01 | 84.3% | 87.7% |
| 3470093 | 3696.1.1.1 ↗ | a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › HARP | 0.77 | 52.0 | 5.89e-01 | 84.3% | 93.8% |
| 3533206 | 3696.1.1.1 ↗ | a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › HARP | 0.77 | 51.0 | 5.84e-01 | 87.6% | 93.8% |
| 3409500 | 3696.1.1.1 ↗ | a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › HARP | 0.73 | 51.0 | 5.64e-01 | 87.6% | 92.9% |
| 3505715 | 304.24.1.3 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_III | 0.68 | 46.0 | 4.86e-01 | 74.2% | 77.5% |
| 3738385 | 304.24.1.3 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_III | 0.68 | 47.0 | 4.78e-01 | 74.2% | 74.1% |
| 4079590 | 306.6.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › PH0987 N-terminal domain-like › PH0987 N-terminal domain-like › CT_C_D | 0.67 | 55.0 | 5.30e-01 | 91.0% | 87.0% |
| 4012791 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.66 | 45.0 | 4.69e-01 | 74.2% | 78.8% |
| 3409366 | 5104.1.1.2 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › CDC45 | 0.65 | 56.0 | 4.81e-01 | 96.6% | 60.7% |
| 3998708 | 5104.1.1.2 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › CDC45 | 0.64 | 56.0 | 4.74e-01 | 98.9% | 62.7% |
| 3619710 | 5104.1.1.0 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases | 0.64 | 56.0 | 4.73e-01 | 98.9% | 61.3% |
| 4926952 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.63 | 41.0 | 4.45e-01 | 74.2% | 82.9% |
| 3549717 | 3016.1.1.2 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_3 | 0.62 | 50.0 | 3.83e-01 | 89.9% | 39.1% |
| 3926837 | 7577.1.1.2 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_3 | 0.62 | 50.0 | 3.23e-01 | 89.9% | 19.6% |
| 3766630 | 7577.1.1.2 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_3 | 0.62 | 50.0 | 3.20e-01 | 89.9% | 18.7% |
| 4581355 | 3016.1.1.2 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_3 | 0.61 | 50.0 | 4.03e-01 | 89.9% | 48.6% |
| 3403707 | 3016.1.1.2 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_3 | 0.61 | 49.0 | 4.52e-01 | 89.9% | 72.5% |
| 1891414 | 3016.1.1.2 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_3 | 0.60 | 49.0 | 4.63e-01 | 89.9% | 78.7% |
| 4978015 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.60 | 47.0 | 4.61e-01 | 86.5% | 82.0% |
| 2092727 | 3016.1.1.2 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_3 | 0.60 | 47.0 | 4.39e-01 | 86.5% | 75.2% |
| 2388907 | 5104.1.1.2 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › CDC45 | 0.60 | 50.0 | 4.41e-01 | 97.8% | 61.3% |
| 4978828 | 3016.1.1.2 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_3 | 0.60 | 48.0 | 4.65e-01 | 88.8% | 83.0% |
| 4054900 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.59 | 51.0 | 4.25e-01 | 95.5% | 63.9% |
| 4945822 | 5104.1.1.0 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases | 0.59 | 49.0 | 4.39e-01 | 91.0% | 84.0% |
| 2465371 | 3016.1.1.2 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_3 | 0.59 | 47.0 | 4.33e-01 | 89.9% | 72.1% |
| 3959503 | 3016.1.1.2 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_3 | 0.58 | 47.0 | 4.24e-01 | 91.0% | 66.4% |
| 1192836 | 3016.1.1.2 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_3 | 0.58 | 46.0 | 4.28e-01 | 89.9% | 71.7% |
| 2870509 | 3016.1.1.2 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_3 | 0.58 | 46.0 | 4.34e-01 | 89.9% | 75.2% |
| 3740219 | 5104.1.1.3 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA2 | 0.58 | 46.0 | 4.09e-01 | 91.0% | 85.0% |
| 5074169 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.55 | 40.0 | 3.63e-01 | 75.3% | 95.8% |
| 3648069 | 223.2.1.3 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Clat_adaptor_s | 0.55 | 44.0 | 3.64e-01 | 88.8% | 71.2% |
| 4994703 | 4955.1.1.0 ↗ | a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit | 0.55 | 44.0 | 4.47e-01 | 87.6% | 96.5% |
| 5009572 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.55 | 38.0 | 3.42e-01 | 73.0% | 51.1% |
| 3597966 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 46.0 | 4.59e-01 | 100.0% | 91.6% |
| 4928701 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.54 | 33.0 | 3.19e-01 | 89.9% | 51.4% |
| 4669668 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.53 | 39.0 | 3.76e-01 | 77.5% | 69.0% |
| 5013026 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.53 | 39.0 | 3.19e-01 | 77.5% | 40.6% |
| 4944313 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.53 | 39.0 | 3.41e-01 | 77.5% | 92.6% |
| 4955747 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.53 | 39.0 | 3.70e-01 | 79.8% | 90.0% |
| 3622943 | 101.1.2.28 ↗ | alpha arrays › HTH › HTH › winged helix domain › eIF-5_eIF-2B | 0.53 | 39.0 | 4.16e-01 | 80.9% | 97.3% |
| 5006953 | 873.1.1.12 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › PF27313 | 0.53 | 36.0 | 3.51e-01 | 70.8% | 66.0% |
| 5075473 | 241.6.1.2 ↗ | a+b two layers › Type III secretory system chaperone-like › Arp2/3 complex subunits › Arp2/3 complex subunits › ARPC4 | 0.52 | 44.0 | 3.67e-01 | 94.4% | 80.6% |
| 3885751 | 331.4.1.1 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › KA1 | 0.52 | 38.0 | 3.73e-01 | 77.5% | 94.7% |
| None | — | 0.52 | 39.0 | 3.56e-01 | 80.9% | 72.5% | |
| 4029381 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.51 | 43.0 | 3.48e-01 | 95.5% | 75.6% |
| 5047936 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.50 | 40.0 | 3.69e-01 | 88.8% | 100.0% |
D5
medium
residues 526-654