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LacPavin_0818_WC40_scaffold_75050_prodigal-single.1__X__X__00253
Bact-VirLacPavin_0818_WC40_scaffold_75050_prodigal-single.1__X__X__00253
Identity
- Kingdom:
- phage
Quality
94.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-108
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5jozA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.65 | 49.0 | 3.55e-01 | 79.4% | 88.9% |
| 3qz4A00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.62 | 45.0 | 3.27e-01 | 76.6% | 95.1% |
| 3qeeB00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.61 | 44.0 | 3.25e-01 | 76.6% | 91.3% |
| 1st8A01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.60 | 45.0 | 3.20e-01 | 78.5% | 91.9% |
| 7pkwA01 | 3.10.450.540 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 42.0 | 4.28e-01 | 74.8% | 97.1% |
| 1khiA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 38.0 | 4.37e-01 | 99.1% | 94.7% |
| 3ovcA01 | 3.30.200.150 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › | 0.55 | 31.0 | 3.69e-01 | 86.0% | 83.1% |
| 1iz6A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 33.0 | 3.86e-01 | 99.1% | 91.3% |
| 1gydB00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.53 | 37.0 | 2.74e-01 | 72.9% | 70.2% |
| 4fm4B02 | 2.30.30.50 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 41.0 | 4.27e-01 | 94.4% | 91.1% |
| 5b4wA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 39.0 | 2.61e-01 | 80.4% | 73.3% |
| 1wnhA01 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 37.0 | 3.86e-01 | 78.5% | 87.0% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3733713 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.62 | 32.0 | 3.51e-01 | 99.1% | 58.9% |
| 3680814 | 5.1.4.15 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RPE65 | 0.58 | 41.0 | 2.88e-01 | 73.8% | 86.0% |
| 3352484 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.58 | 45.0 | 3.03e-01 | 81.3% | 40.3% |
| 3359021 | 5.1.5.86 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Kelch_1 | 0.58 | 44.0 | 3.11e-01 | 81.3% | 44.4% |
| 3940929 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.57 | 37.0 | 2.52e-01 | 73.8% | 17.5% |
| 4238063 | 5.1.4.15 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RPE65 | 0.57 | 43.0 | 2.94e-01 | 77.6% | 89.0% |
| 3480379 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.56 | 40.0 | 4.09e-01 | 84.1% | 75.2% |
| 3484308 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.56 | 43.0 | 2.80e-01 | 80.4% | 69.0% |
| 1498262 | 5.1.2.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_43 | 0.56 | 40.0 | 2.78e-01 | 74.8% | 55.1% |
| 3582326 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 42.0 | 3.24e-01 | 82.2% | 94.8% |
| 4990210 | 283.2.1.8 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › PF29994 | 0.54 | 41.0 | 4.33e-01 | 96.3% | 90.5% |
| 4960403 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.53 | 31.0 | 3.37e-01 | 100.0% | 67.8% |
| 3185466 | 4.1.1.225 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7025 | 0.53 | 39.0 | 3.20e-01 | 92.5% | 41.5% |
| 2388815 | 5.1.4.292 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, CAF1C_H4-bd, Beta-prop_EIPR1 | 0.50 | 31.0 | 3.39e-01 | 93.5% | 77.1% |
| 3401290 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.50 | 30.0 | 2.97e-01 | 96.3% | 52.5% |
| 3467519 | 2.1.1.229 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30940 | 0.50 | 28.0 | 2.88e-01 | 99.1% | 54.3% |