←Back to structures
LacPavin_0818_WC40_scaffold_75050_prodigal-single.1__X__X__00275
Bact-VirLacPavin_0818_WC40_scaffold_75050_prodigal-single.1__X__X__00275
Identity
- Kingdom:
- phage
Quality
95.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-91
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wzoA01 | 2.30.30.370 | Mainly Beta › Roll › SH3 type barrels. › FAH | 0.73 | 35.0 | 4.75e-01 | 72.1% | 97.5% |
| 1wjrA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 50.0 | 4.40e-01 | 87.2% | 79.5% |
| 3j7yD02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 43.0 | 4.45e-01 | 75.6% | 95.1% |
| 1udlA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.57 | 41.0 | 3.99e-01 | 76.7% | 82.7% |
| 1tj6A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 39.0 | 3.63e-01 | 73.3% | 81.7% |
| 2a7yA00 | 2.30.30.440 | Mainly Beta › Roll › SH3 type barrels. › Domain of unknown function DUF1918 | 0.56 | 40.0 | 4.18e-01 | 76.7% | 86.3% |
| 2rqrA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.55 | 40.0 | 3.54e-01 | 75.6% | 73.1% |
| 2p3yA04 | 2.60.120.600 | Mainly Beta › Sandwich › Jelly Rolls › Domain of unknown function DUF1214, C-terminal domain | 0.53 | 36.0 | 2.91e-01 | 70.9% | 86.3% |
| 2dmoA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.52 | 36.0 | 3.96e-01 | 98.8% | 92.6% |
| 2g5dA01 | 2.40.40.10 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain | 0.51 | 40.0 | 3.06e-01 | 84.9% | 73.1% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4508544 | 4.1.1.27 ↗ | beta barrels › SH3 › SH3 › SH3 › NHase_beta_C | 0.71 | 50.0 | 4.61e-01 | 72.1% | 91.4% |
| 3678872 | 4.1.1.239 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O | 0.70 | 48.0 | 5.13e-01 | 70.9% | 100.0% |
| 3926175 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 47.0 | 4.78e-01 | 73.3% | 76.5% |
| 3688068 | 4.1.1.51 ↗ | beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor | 0.66 | 47.0 | 3.92e-01 | 75.6% | 68.7% |
| 3808601 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 48.0 | 4.88e-01 | 80.2% | 98.8% |
| 4574546 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.60 | 43.0 | 4.77e-01 | 80.2% | 98.5% |
| 3252839 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 47.0 | 5.01e-01 | 82.6% | 94.7% |
| 3855972 | 4.1.1.253 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4537 | 0.60 | 43.0 | 4.84e-01 | 83.7% | 98.5% |
| 3716195 | 6.1.1.0 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil | 0.59 | 45.0 | 3.84e-01 | 83.7% | 98.0% |
| 4133335 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.59 | 40.0 | 4.67e-01 | 86.0% | 100.0% |
| 4021478 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 40.0 | 4.07e-01 | 70.9% | 81.2% |
| 3443610 | 6.1.1.34 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › DUF7910 | 0.55 | 42.0 | 3.63e-01 | 82.6% | 100.0% |
| 5010031 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.55 | 46.0 | 4.11e-01 | 87.2% | 86.1% |
| 3256720 | 11.1.4.34 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › SdrD_B | 0.54 | 37.0 | 3.34e-01 | 72.1% | 58.3% |
| 4598590 | 4.1.1.303 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus | 0.53 | 39.0 | 4.21e-01 | 82.6% | 97.1% |
| 3515762 | 4.1.1.303 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus | 0.53 | 41.0 | 4.37e-01 | 83.7% | 100.0% |
| 3437523 | 4.1.1.303 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus | 0.52 | 39.0 | 4.19e-01 | 81.4% | 100.0% |