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LacPavin_0818_WC40_scaffold_86355_prodigal-single.1__X__X__00032
Bact-VirLacPavin_0818_WC40_scaffold_86355_prodigal-single.1__X__X__00032
Identity
- Kingdom:
- phage
Quality
78.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 15-60_98-122_204-258
Domain cluster:
rep: IMGVR_UViG_3300028840_006907-3300028840-Ga0309773_1000015542__D55-77_97-171
CATH (59)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2covG00 | 2.60.40.2450 | Mainly Beta › Sandwich › Immunoglobulin-like › Beta-1,3-xylanase, CBM31 domain | 0.77 | 43.0 | 5.03e-01 | 100.0% | 77.3% |
| 3cu7A05 | 2.60.40.1930 | Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain | 0.77 | 49.0 | 5.36e-01 | 100.0% | 77.4% |
| 7q61A01 | 2.60.40.1940 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.75 | 52.0 | 5.57e-01 | 100.0% | 81.7% |
| 2pn5A03 | 2.60.40.1940 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.75 | 49.0 | 5.33e-01 | 100.0% | 79.0% |
| 6rptC00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.73 | 50.0 | 5.30e-01 | 100.0% | 78.6% |
| 2oz4A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.72 | 43.0 | 4.88e-01 | 100.0% | 77.3% |
| 4i0kA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.72 | 43.0 | 4.90e-01 | 100.0% | 78.9% |
| 5hccB03 | 2.60.40.1940 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.72 | 56.0 | 5.73e-01 | 100.0% | 84.3% |
| 3lcyA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.72 | 42.0 | 4.78e-01 | 100.0% | 76.3% |
| 2b39A03 | 2.60.40.1940 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.71 | 54.0 | 5.44e-01 | 100.0% | 78.4% |
| 5aa7A00 | 2.70.50.50 | Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › chitin-binding protein cbp21 | 0.70 | 42.0 | 4.08e-01 | 100.0% | 52.8% |
| 5jtwA03 | 2.60.40.1940 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.70 | 54.0 | 5.45e-01 | 100.0% | 79.5% |
| 2zwsA02 | 2.60.40.2300 | Mainly Beta › Sandwich › Immunoglobulin-like › Neutral/alkaline non-lysosomal ceramidase, C-terminal domain | 0.70 | 54.0 | 5.34e-01 | 100.0% | 75.4% |
| 1kv3A03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.70 | 52.0 | 5.36e-01 | 100.0% | 82.1% |
| 4oy7E00 | 2.70.50.50 | Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › chitin-binding protein cbp21 | 0.70 | 50.0 | 4.33e-01 | 100.0% | 48.2% |
| 2qkdA01 | 2.20.25.420 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain | 0.70 | 28.0 | 4.33e-01 | 95.2% | 95.8% |
| 4ak2A01 | 2.60.40.2720 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.69 | 42.0 | 4.41e-01 | 100.0% | 65.8% |
| 4a02A00 | 2.70.50.50 | Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › chitin-binding protein cbp21 | 0.68 | 48.0 | 4.40e-01 | 100.0% | 54.8% |
| 7jooC01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.67 | 46.0 | 5.23e-01 | 99.2% | 91.8% |
| 3pv7A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.67 | 44.0 | 4.94e-01 | 100.0% | 88.3% |
| 5vt8C01 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.67 | 40.0 | 4.44e-01 | 100.0% | 74.3% |
| 1l9mA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.67 | 49.0 | 4.75e-01 | 100.0% | 68.3% |
| 5d6hA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.66 | 47.0 | 4.71e-01 | 100.0% | 72.2% |
| 5ftzA00 | 2.70.50.50 | Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › chitin-binding protein cbp21 | 0.66 | 47.0 | 4.27e-01 | 100.0% | 54.1% |
| 6bxuA02 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.66 | 40.0 | 4.51e-01 | 100.0% | 78.9% |
| 4kkpA02 | 2.60.40.3880 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.66 | 44.0 | 4.68e-01 | 100.0% | 77.0% |
| 5cyxA01 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.64 | 37.0 | 4.41e-01 | 100.0% | 85.4% |
| 2r39A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 41.0 | 4.37e-01 | 100.0% | 73.4% |
| 3o4oC02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 41.0 | 4.42e-01 | 100.0% | 75.7% |
| 1w8oA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 41.0 | 4.53e-01 | 100.0% | 80.4% |
| 5vh2A02 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.63 | 40.0 | 4.32e-01 | 100.0% | 76.0% |
| 4depC02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 38.0 | 4.19e-01 | 100.0% | 74.5% |
| 1hxmB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 48.0 | 4.91e-01 | 100.0% | 82.4% |
| 3mnmA00 | 2.60.40.1230 | Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain | 0.62 | 41.0 | 4.36e-01 | 100.0% | 75.9% |
| 5wjmA02 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.62 | 38.0 | 4.05e-01 | 100.0% | 70.0% |
| 4wiqA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 39.0 | 4.18e-01 | 100.0% | 74.5% |
| 4ncdA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 47.0 | 4.86e-01 | 100.0% | 85.6% |
| 4kc3B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 39.0 | 4.39e-01 | 100.0% | 84.2% |
| 2wliA02 | 2.60.40.1400 | Mainly Beta › Sandwich › Immunoglobulin-like › G protein-activated inward rectifier potassium channel 1 | 0.61 | 47.0 | 4.37e-01 | 100.0% | 64.6% |
| 4ympA00 | 2.60.40.1850 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 35.0 | 3.73e-01 | 100.0% | 63.4% |
| 4fqpA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 36.0 | 4.08e-01 | 100.0% | 79.3% |
| 3oq3B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 39.0 | 4.33e-01 | 100.0% | 83.0% |
| 1gyvA00 | 2.60.40.1230 | Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain | 0.60 | 42.0 | 4.28e-01 | 100.0% | 75.0% |
| 4apxB02 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.59 | 42.0 | 4.35e-01 | 100.0% | 78.0% |
| 1n9pA00 | 2.60.40.1400 | Mainly Beta › Sandwich › Immunoglobulin-like › G protein-activated inward rectifier potassium channel 1 | 0.59 | 48.0 | 4.14e-01 | 100.0% | 55.8% |
| 2wllA02 | 2.60.40.1400 | Mainly Beta › Sandwich › Immunoglobulin-like › G protein-activated inward rectifier potassium channel 1 | 0.58 | 48.0 | 4.62e-01 | 100.0% | 76.6% |
| 1na8B00 | 2.60.40.1230 | Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain | 0.58 | 41.0 | 3.93e-01 | 100.0% | 62.8% |
| 1zvnA01 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.58 | 39.0 | 4.45e-01 | 100.0% | 93.6% |
| 3hxlA05 | 3.30.360.90 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › | 0.58 | 28.0 | 3.76e-01 | 100.0% | 85.5% |
| 1p5vA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 39.0 | 4.29e-01 | 100.0% | 86.4% |
| 1s7mA03 | 2.20.25.140 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.56 | 15.0 | 2.78e-01 | 79.4% | 85.7% |
| 4bhuA00 | 2.60.40.3490 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 43.0 | 4.31e-01 | 100.0% | 78.9% |
| 7me5A01 | 2.60.40.2170 | Mainly Beta › Sandwich › Immunoglobulin-like › Wnt, WIF domain | 0.55 | 39.0 | 3.86e-01 | 100.0% | 68.7% |
| 3uoaB02 | 2.60.40.3360 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 41.0 | 4.04e-01 | 100.0% | 75.0% |
| 4b9iA00 | 2.60.40.3480 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 44.0 | 4.43e-01 | 100.0% | 91.2% |
| 3fcsA03 | 2.60.40.1510 | Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 3 | 0.53 | 44.0 | 4.25e-01 | 100.0% | 79.9% |
| 4hsqA01 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 45.0 | 4.35e-01 | 100.0% | 84.7% |
| 3a21A03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.50 | 34.0 | 3.81e-01 | 91.3% | 87.1% |
| 5mw5A01 | 2.60.40.3510 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 43.0 | 4.08e-01 | 100.0% | 78.1% |
ECOD (98)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4988123 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.83 | 52.0 | 5.46e-01 | 100.0% | 68.7% |
| 5059974 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.82 | 49.0 | 5.59e-01 | 100.0% | 78.9% |
| 3406851 | 11.1.1.239 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › MG3 | 0.82 | 49.0 | 5.56e-01 | 100.0% | 78.9% |
| 5067394 | 11.1.1.246 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_7 | 0.82 | 46.0 | 5.37e-01 | 100.0% | 77.8% |
| 4955094 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.81 | 46.0 | 4.93e-01 | 100.0% | 64.5% |
| 5039567 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.81 | 52.0 | 5.67e-01 | 100.0% | 78.1% |
| 5044833 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.80 | 52.0 | 5.75e-01 | 100.0% | 82.0% |
| 4952328 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.80 | 48.0 | 4.76e-01 | 100.0% | 57.7% |
| 5060172 | 11.1.1.246 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_7 | 0.80 | 48.0 | 5.41e-01 | 100.0% | 77.0% |
| 5060711 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.79 | 43.0 | 5.17e-01 | 100.0% | 78.8% |
| 4969269 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.79 | 50.0 | 5.52e-01 | 100.0% | 80.0% |
| 5060580 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.78 | 55.0 | 5.91e-01 | 100.0% | 82.7% |
| 5075556 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.78 | 49.0 | 5.46e-01 | 100.0% | 79.0% |
| 4999322 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.78 | 50.0 | 5.61e-01 | 100.0% | 82.0% |
| 4981224 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.78 | 43.0 | 5.15e-01 | 100.0% | 80.0% |
| 5063659 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.78 | 49.0 | 5.35e-01 | 100.0% | 76.2% |
| 5077840 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.78 | 47.0 | 5.84e-01 | 97.6% | 96.2% |
| 5001414 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.77 | 50.0 | 5.54e-01 | 100.0% | 82.0% |
| 1807145 | 11.1.1.102 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › A2M_BRD | 0.76 | 49.0 | 5.28e-01 | 100.0% | 74.5% |
| 5061246 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.76 | 47.0 | 5.32e-01 | 100.0% | 82.1% |
| 1822588 | 11.1.1.239 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › MG3 | 0.75 | 49.0 | 5.27e-01 | 100.0% | 76.9% |
| 5041035 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.75 | 46.0 | 5.14e-01 | 100.0% | 78.0% |
| 4973284 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.74 | 48.0 | 5.17e-01 | 100.0% | 75.5% |
| 5039695 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.74 | 54.0 | 5.24e-01 | 100.0% | 67.9% |
| 4934785 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.74 | 52.0 | 5.47e-01 | 100.0% | 79.8% |
| 4968160 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.74 | 46.0 | 5.55e-01 | 100.0% | 97.5% |
| 4929255 | 11.1.1.65 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CopC | 0.73 | 46.0 | 4.96e-01 | 100.0% | 72.7% |
| 4934612 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.73 | 51.0 | 5.34e-01 | 100.0% | 78.3% |
| 4956408 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.73 | 46.0 | 5.11e-01 | 100.0% | 80.0% |
| 4941435 | 11.1.1.39 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_1 | 0.73 | 47.0 | 5.21e-01 | 100.0% | 82.0% |
| 4933011 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.72 | 42.0 | 4.88e-01 | 100.0% | 80.0% |
| 5060059 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.72 | 48.0 | 5.12e-01 | 100.0% | 78.2% |
| 4933928 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.71 | 45.0 | 5.05e-01 | 100.0% | 81.8% |
| 4944246 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.70 | 48.0 | 5.21e-01 | 100.0% | 82.9% |
| 3929336 | 11.1.1.606 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › BBS2_GAE | 0.70 | 45.0 | 4.99e-01 | 100.0% | 81.0% |
| 4980867 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.70 | 45.0 | 4.91e-01 | 100.0% | 78.1% |
| 5080816 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.70 | 53.0 | 5.22e-01 | 100.0% | 73.3% |
| 5014293 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.70 | 44.0 | 4.88e-01 | 100.0% | 80.0% |
| 3992964 | 11.1.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin | 0.69 | 40.0 | 4.72e-01 | 100.0% | 83.5% |
| 3253618 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.69 | 41.0 | 5.01e-01 | 100.0% | 92.5% |
| 4931900 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.69 | 50.0 | 5.09e-01 | 100.0% | 75.2% |
| 5068126 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.69 | 46.0 | 4.88e-01 | 100.0% | 77.3% |
| 5030512 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.68 | 43.0 | 4.76e-01 | 99.2% | 79.0% |
| 3496538 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.68 | 51.0 | 5.22e-01 | 99.2% | 80.8% |
| 3996462 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.68 | 38.0 | 4.46e-01 | 100.0% | 77.8% |
| 4675131 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.67 | 52.0 | 4.79e-01 | 100.0% | 63.7% |
| 3884425 | 11.1.1.566 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › MOV-10_Ig-like | 0.67 | 46.0 | 4.64e-01 | 100.0% | 70.4% |
| 4938171 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.66 | 43.0 | 4.81e-01 | 100.0% | 83.0% |
| 5045594 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.66 | 41.0 | 4.40e-01 | 100.0% | 72.4% |
| 4981173 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.66 | 44.0 | 4.79e-01 | 100.0% | 81.0% |
| 3171913 | 11.1.1.44 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Alpha_adaptinC2 | 0.66 | 42.0 | 4.48e-01 | 100.0% | 72.7% |
| 5080009 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.66 | 44.0 | 4.65e-01 | 100.0% | 76.4% |
| 3503353 | 11.1.1.75 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › He_PIG | 0.66 | 41.0 | 4.27e-01 | 100.0% | 65.8% |
| 3217893 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.65 | 41.0 | 3.72e-01 | 100.0% | 47.9% |
| 5080735 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.65 | 41.0 | 5.04e-01 | 97.6% | 100.0% |
| 5061413 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.65 | 45.0 | 4.86e-01 | 100.0% | 84.8% |
| 3628540 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.65 | 37.0 | 4.43e-01 | 88.1% | 86.3% |
| 3994281 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 46.0 | 4.78e-01 | 100.0% | 79.2% |
| 5028964 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 43.0 | 4.64e-01 | 100.0% | 80.0% |
| 5018129 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 42.0 | 4.57e-01 | 100.0% | 81.9% |
| 5038238 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 41.0 | 4.58e-01 | 100.0% | 84.0% |
| 3398615 | 11.1.1.44 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Alpha_adaptinC2 | 0.63 | 43.0 | 4.33e-01 | 100.0% | 68.5% |
| 3475449 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 40.0 | 4.57e-01 | 100.0% | 90.0% |
| 3250796 | 11.1.1.895 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF29538 | 0.62 | 50.0 | 4.91e-01 | 100.0% | 79.3% |
| 3222012 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 44.0 | 4.46e-01 | 100.0% | 73.6% |
| 5019878 | 11.8.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Osmotin-like › Osmotin-like | 0.62 | 40.0 | 4.10e-01 | 100.0% | 66.7% |
| 3619256 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 37.0 | 4.18e-01 | 98.4% | 77.9% |
| 4941719 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 45.0 | 4.67e-01 | 100.0% | 81.7% |
| 3272455 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.61 | 40.0 | 3.87e-01 | 100.0% | 58.6% |
| 5043955 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 43.0 | 4.49e-01 | 99.2% | 80.0% |
| 4985979 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 43.0 | 4.52e-01 | 100.0% | 80.9% |
| 3479689 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 35.0 | 4.28e-01 | 88.1% | 94.7% |
| 5024963 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 45.0 | 4.45e-01 | 100.0% | 74.6% |
| 4956125 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 45.0 | 4.72e-01 | 100.0% | 87.0% |
| 3933398 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 38.0 | 4.26e-01 | 99.2% | 84.2% |
| 5062045 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 43.0 | 4.55e-01 | 100.0% | 85.5% |
| 4931946 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 46.0 | 4.58e-01 | 100.0% | 79.2% |
| 4013560 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 48.0 | 4.75e-01 | 100.0% | 83.1% |
| 3741544 | 11.1.1.44 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Alpha_adaptinC2 | 0.59 | 41.0 | 4.24e-01 | 100.0% | 77.4% |
| 5019498 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 40.0 | 4.30e-01 | 100.0% | 82.9% |
| 5041119 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 43.0 | 4.65e-01 | 100.0% | 88.2% |
| 3203718 | 11.1.5.105 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › DUF7077 | 0.59 | 45.0 | 4.60e-01 | 100.0% | 82.4% |
| 4968512 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 41.0 | 4.52e-01 | 100.0% | 91.0% |
| 4969082 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 42.0 | 4.43e-01 | 100.0% | 82.6% |
| 3535271 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 43.0 | 4.26e-01 | 100.0% | 72.6% |
| 4993748 | 11.1.1.531 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF11 | 0.58 | 45.0 | 4.47e-01 | 99.2% | 77.7% |
| 3925906 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 41.0 | 4.05e-01 | 100.0% | 68.1% |
| 4991748 | 11.1.1.531 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF11 | 0.58 | 44.0 | 4.18e-01 | 100.0% | 68.3% |
| 3566294 | 11.1.1.477 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Frem_N | 0.58 | 39.0 | 4.20e-01 | 100.0% | 80.0% |
| 3628355 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.57 | 29.0 | 2.17e-01 | 88.9% | 19.4% |
| 5018035 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 42.0 | 4.27e-01 | 100.0% | 76.8% |
| 5069371 | 11.1.1.138 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › NPCBM_assoc | 0.57 | 41.0 | 4.24e-01 | 100.0% | 79.2% |
| 3624851 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 43.0 | 4.10e-01 | 100.0% | 67.3% |
| 5035123 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 44.0 | 4.32e-01 | 100.0% | 77.0% |
| 3574276 | 11.1.4.112 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › DUF3694 | 0.56 | 48.0 | 4.63e-01 | 100.0% | 82.9% |
| 1070299 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.53 | 44.0 | 4.43e-01 | 100.0% | 91.2% |
| 3474405 | 11.1.1.550 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin_3 | 0.52 | 40.0 | 4.28e-01 | 100.0% | 93.6% |
| 5054514 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 42.0 | 4.17e-01 | 100.0% | 85.4% |
D2
high
residues 126-198
Domain cluster:
rep: OK040790.1__UDL15888.1__SEA_PUMPERNICKEL_97__00097__D598-675
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1v0fB03 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.80 | 73.0 | 6.93e-01 | 100.0% | 92.9% |
| 2v31A01 | 2.40.30.180 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Ubiquitin-activating enzyme E1, FCCH domain | 0.79 | 71.0 | 6.44e-01 | 100.0% | 78.4% |
| 4b3fX02 | 2.40.30.270 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.70 | 63.0 | 5.71e-01 | 100.0% | 83.7% |
| 8b6zA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.69 | 63.0 | 6.05e-01 | 100.0% | 98.8% |
| 3gqbA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.67 | 54.0 | 5.52e-01 | 100.0% | 94.4% |
| 4dk0A02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.67 | 60.0 | 5.59e-01 | 100.0% | 93.3% |
| 6tdyD01 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.66 | 58.0 | 5.77e-01 | 100.0% | 97.3% |
| 3w1eA03 | 2.40.10.410 | Mainly Beta › Beta Barrel › Thrombin, subunit H › FlgT, C-terminal domain | 0.63 | 56.0 | 5.29e-01 | 100.0% | 95.5% |
| 4xotA03 | 2.40.30.250 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.63 | 53.0 | 5.13e-01 | 100.0% | 83.7% |
| 3mlpA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 52.0 | 4.30e-01 | 100.0% | 51.9% |
| 2vrsA03 | 2.60.90.40 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › | 0.60 | 51.0 | 4.31e-01 | 100.0% | 69.7% |
| 4l8jA02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.58 | 49.0 | 4.62e-01 | 100.0% | 93.7% |
| 4ay0B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 45.0 | 4.41e-01 | 100.0% | 79.3% |
| 2cxkA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 49.0 | 4.68e-01 | 100.0% | 79.3% |
| 3gg8C03 | 2.40.33.10 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.57 | 50.0 | 4.63e-01 | 100.0% | 91.8% |
| 2zuvA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 47.0 | 4.29e-01 | 100.0% | 75.5% |
| 2n01B00 | 2.60.40.2500 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 45.0 | 4.00e-01 | 100.0% | 62.3% |
| 2bseA00 | 2.60.40.1830 | Mainly Beta › Sandwich › Immunoglobulin-like › Phage tail base-plate Siphoviridae RBP, head domain | 0.54 | 45.0 | 4.10e-01 | 100.0% | 69.2% |
| 4a0tA03 | 2.60.320.30 | Mainly Beta › Sandwich › mini-chromosome maintenance (MCM) complex, domain 2 › | 0.54 | 45.0 | 4.30e-01 | 100.0% | 91.1% |
| 7plsA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.53 | 44.0 | 4.13e-01 | 100.0% | 76.3% |
| 1iarB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 46.0 | 4.26e-01 | 100.0% | 84.4% |
| 1cx1A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 43.0 | 3.54e-01 | 100.0% | 92.2% |
| 7aj6H01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 42.0 | 3.72e-01 | 98.6% | 81.5% |
| 5h4cB00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 43.0 | 3.66e-01 | 100.0% | 90.4% |
| 3c7fA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 42.0 | 3.59e-01 | 100.0% | 93.7% |
| 4es8B01 | 2.60.120.1240 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 43.0 | 3.28e-01 | 100.0% | 96.4% |
| 2g3mA04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.51 | 37.0 | 3.54e-01 | 98.6% | 66.3% |
ECOD (48)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3488003 | 1.1.7.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › E1_FCCH | 0.85 | 79.0 | 7.45e-01 | 100.0% | 92.9% |
| 3332862 | 1.1.7.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › E1_FCCH | 0.83 | 76.0 | 6.93e-01 | 100.0% | 81.1% |
| 4028468 | 1.1.7.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › E1_FCCH | 0.83 | 77.0 | 6.70e-01 | 100.0% | 71.4% |
| 1030933 | 1.1.7.29 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › End_beta_barrel | 0.80 | 73.0 | 6.81e-01 | 100.0% | 88.8% |
| 199114 | 1.1.7.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › E1_FCCH | 0.79 | 71.0 | 6.13e-01 | 100.0% | 67.9% |
| 3607489 | 1.1.7.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_8 | 0.68 | 59.0 | 5.45e-01 | 98.6% | 94.7% |
| 4943366 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.67 | 58.0 | 5.60e-01 | 100.0% | 84.7% |
| 4173804 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.66 | 59.0 | 5.52e-01 | 100.0% | 93.3% |
| 3180314 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.64 | 56.0 | 5.40e-01 | 100.0% | 95.3% |
| 1113011 | 1.1.7.52 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HK620_9_C | 0.64 | 55.0 | 5.37e-01 | 100.0% | 92.6% |
| 4943168 | 1.1.7.144 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › AAA_11 | 0.64 | 58.0 | 5.30e-01 | 100.0% | 78.9% |
| 3213748 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 50.0 | 4.36e-01 | 100.0% | 59.1% |
| 3845669 | 11.1.1.396 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Anth_Ig | 0.58 | 49.0 | 4.59e-01 | 98.6% | 85.3% |
| 3265105 | 11.1.1.802 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF8390 | 0.58 | 50.0 | 4.67e-01 | 100.0% | 76.8% |
| 3273204 | 11.1.1.802 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF8390 | 0.58 | 50.0 | 4.66e-01 | 100.0% | 77.9% |
| 3665562 | 12.1.1.63 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Raffinose_syn | 0.58 | 42.0 | 4.00e-01 | 98.6% | 63.2% |
| 4960841 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.57 | 46.0 | 3.59e-01 | 100.0% | 37.8% |
| 3260084 | 11.1.1.29 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG | 0.57 | 50.0 | 4.21e-01 | 100.0% | 66.4% |
| 3270789 | 11.1.1.29 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG | 0.57 | 48.0 | 4.55e-01 | 100.0% | 76.7% |
| 3275146 | 11.1.1.802 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF8390 | 0.57 | 49.0 | 4.64e-01 | 100.0% | 81.1% |
| 3385472 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 47.0 | 4.52e-01 | 100.0% | 95.6% |
| 3256018 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 46.0 | 4.43e-01 | 100.0% | 78.9% |
| 4946539 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.56 | 44.0 | 4.41e-01 | 97.3% | 86.7% |
| 3249574 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 47.0 | 4.50e-01 | 98.6% | 85.6% |
| 3273402 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 48.0 | 4.57e-01 | 100.0% | 83.3% |
| 3889990 | 11.1.1.396 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Anth_Ig | 0.55 | 46.0 | 3.96e-01 | 95.9% | 62.6% |
| 3250649 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 49.0 | 4.30e-01 | 98.6% | 71.4% |
| 3251949 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 46.0 | 4.40e-01 | 94.5% | 81.2% |
| 2430480 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.54 | 45.0 | 3.87e-01 | 98.6% | 77.3% |
| 3643659 | 12.1.1.63 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Raffinose_syn | 0.54 | 40.0 | 3.70e-01 | 100.0% | 60.0% |
| 3275384 | 11.1.1.29 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG | 0.54 | 45.0 | 4.25e-01 | 100.0% | 75.6% |
| 3753826 | 11.1.1.396 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Anth_Ig | 0.54 | 45.0 | 4.26e-01 | 95.9% | 85.6% |
| 3970514 | 11.1.1.1065 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF25971 | 0.54 | 46.0 | 4.22e-01 | 100.0% | 75.0% |
| 3487304 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 47.0 | 3.84e-01 | 100.0% | 66.2% |
| 3333822 | 10.32.1.38 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Malectin_like | 0.53 | 45.0 | 3.55e-01 | 100.0% | 82.9% |
| 5012887 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 44.0 | 3.96e-01 | 100.0% | 65.2% |
| 3555135 | 11.1.1.126 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › IL4Ra_N | 0.53 | 46.0 | 4.09e-01 | 100.0% | 73.6% |
| 3742853 | 4081.1.1.7 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Ribophorin_I | 0.53 | 45.0 | 3.44e-01 | 100.0% | 40.0% |
| 3994570 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.52 | 43.0 | 3.60e-01 | 100.0% | 60.7% |
| 3691730 | 6.1.1.37 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › DUF7908 | 0.52 | 37.0 | 3.13e-01 | 78.1% | 97.7% |
| 3735977 | 11.1.1.14 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Glyco_hydro_2 | 0.51 | 43.0 | 3.92e-01 | 98.6% | 88.6% |
| 5041423 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.51 | 41.0 | 3.55e-01 | 98.6% | 77.8% |
| 3403486 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 43.0 | 3.84e-01 | 100.0% | 83.6% |
| 3880869 | 11.1.1.260 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG_2 | 0.51 | 43.0 | 3.91e-01 | 100.0% | 80.0% |
| 4926998 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 40.0 | 3.53e-01 | 100.0% | 56.7% |
| 1862383 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 42.0 | 3.46e-01 | 100.0% | 56.3% |
| 1862363 | 11.1.1.260 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG_2 | 0.50 | 41.0 | 3.60e-01 | 100.0% | 66.4% |
| None | — | 0.50 | 42.0 | 3.47e-01 | 100.0% | 57.0% |
D3
medium
residues 697-789_979-1072
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6oqrA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.73 | 29.0 | 4.14e-01 | 96.3% | 75.6% |
| 3gqbA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.72 | 29.0 | 4.60e-01 | 96.8% | 98.6% |
| 2kr7A02 | 2.40.10.330 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.65 | 21.0 | 3.68e-01 | 84.0% | 91.2% |
| 6hhuA01 | 2.60.40.1220 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.63 | 26.0 | 3.87e-01 | 92.0% | 88.5% |
| 2ra1A04 | 2.60.40.1220 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.63 | 28.0 | 3.74e-01 | 94.1% | 77.3% |
| 4dqlB01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.62 | 35.0 | 4.58e-01 | 96.8% | 97.2% |
| 3fawA01 | 2.60.40.1220 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 26.0 | 3.60e-01 | 94.7% | 77.2% |
| 1ddgA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.61 | 36.0 | 4.62e-01 | 97.3% | 96.5% |
| 5gxuB01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.61 | 38.0 | 4.65e-01 | 97.3% | 95.1% |
| 4i86A00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.60 | 28.0 | 3.76e-01 | 93.6% | 80.4% |
| 2v31A01 | 2.40.30.180 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Ubiquitin-activating enzyme E1, FCCH domain | 0.60 | 29.0 | 3.93e-01 | 97.9% | 88.7% |
| 3kyfA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.58 | 30.0 | 3.77e-01 | 91.4% | 79.5% |
| 2e8yA01 | 2.60.40.2320 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 26.0 | 3.35e-01 | 93.6% | 73.3% |
| 3hrpA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 26.0 | 3.39e-01 | 96.8% | 78.9% |
| 4j27A02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.54 | 23.0 | 3.09e-01 | 94.1% | 75.3% |
| 1lp9E02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 24.0 | 3.29e-01 | 92.5% | 92.5% |
| 1kjzA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.51 | 25.0 | 3.51e-01 | 80.2% | 94.6% |
| 2vrsA03 | 2.60.90.40 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › | 0.50 | 29.0 | 3.29e-01 | 97.9% | 75.8% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3944437 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.74 | 33.0 | 5.04e-01 | 97.3% | 100.0% |
| 3389361 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.66 | 34.0 | 4.76e-01 | 98.4% | 100.0% |
| 5035362 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.64 | 32.0 | 4.36e-01 | 95.7% | 95.6% |
| 3964292 | 1.1.13.38 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_BR0599 | 0.64 | 33.0 | 4.19e-01 | 100.0% | 83.6% |
| 4505321 | 284.4.1.0 ↗ | a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain | 0.64 | 21.0 | 3.58e-01 | 79.7% | 92.7% |
| 4955177 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.63 | 28.0 | 3.71e-01 | 100.0% | 74.3% |
| 3611892 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.62 | 31.0 | 3.15e-01 | 95.7% | 47.4% |
| 3265288 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 29.0 | 3.65e-01 | 97.3% | 80.0% |
| 3276828 | 11.1.1.698 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_TgrO1 | 0.58 | 26.0 | 3.62e-01 | 96.8% | 87.1% |
| 5019984 | 12.1.1.114 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › DUF2341 | 0.57 | 30.0 | 3.95e-01 | 96.8% | 94.7% |
| 4617893 | 11.1.1.185 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DBB | 0.57 | 25.0 | 3.08e-01 | 96.3% | 62.5% |
| 4942630 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 30.0 | 3.94e-01 | 97.9% | 94.0% |
| 3369936 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 28.0 | 3.64e-01 | 96.8% | 82.9% |
| 135892 | 11.1.1.29 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG | 0.56 | 26.0 | 3.39e-01 | 96.8% | 78.9% |
| 5018861 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 27.0 | 3.49e-01 | 93.6% | 84.8% |
| 2793480 | 11.1.1.245 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_6 | 0.53 | 23.0 | 3.20e-01 | 97.9% | 83.3% |
| 4981697 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 26.0 | 3.37e-01 | 96.8% | 84.0% |
| 5049496 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.52 | 27.0 | 3.03e-01 | 99.5% | 61.4% |
| 3273842 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 23.0 | 3.16e-01 | 81.8% | 87.1% |
| 4945637 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 25.0 | 3.24e-01 | 97.9% | 84.0% |
D4
medium
residues 790-810_903-967
Domain cluster:
representative
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6oqrA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.71 | 54.0 | 5.39e-01 | 88.4% | 76.7% |
| 6tdyD01 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.70 | 56.0 | 5.98e-01 | 94.2% | 98.7% |
| 2zzeA03 | 2.40.30.130 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.69 | 57.0 | 5.45e-01 | 97.7% | 77.6% |
| 6f2mA02 | 2.40.30.290 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.69 | 62.0 | 6.22e-01 | 100.0% | 100.0% |
| 3kw3B01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.69 | 58.0 | 4.84e-01 | 91.9% | 81.0% |
| 5gxuB01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.68 | 59.0 | 5.27e-01 | 95.3% | 92.6% |
| 4g6iB01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.68 | 61.0 | 6.08e-01 | 98.8% | 98.9% |
| 4dqlB01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.67 | 57.0 | 5.28e-01 | 93.0% | 96.3% |
| 1fx0B01 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.67 | 56.0 | 5.86e-01 | 94.2% | 98.7% |
| 5yycA01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.67 | 57.0 | 4.90e-01 | 93.0% | 76.3% |
| 3cpxA02 | 2.40.30.40 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 | 0.66 | 46.0 | 5.12e-01 | 84.9% | 100.0% |
| 1ylnA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.65 | 52.0 | 4.70e-01 | 84.9% | 72.8% |
| 4lusB01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.65 | 56.0 | 4.65e-01 | 94.2% | 69.8% |
| 3hurA01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.64 | 54.0 | 4.39e-01 | 91.9% | 64.6% |
| 2it1A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.63 | 37.0 | 4.14e-01 | 96.5% | 78.7% |
| 1v0fB03 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.62 | 53.0 | 5.34e-01 | 97.7% | 96.5% |
| 3gs9A01 | 6.20.110.10 | Special › Other non-globular › Thrombin, subunit H › | 0.61 | 46.0 | 4.81e-01 | 80.2% | 89.9% |
| 1kjzA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.61 | 47.0 | 4.59e-01 | 81.4% | 81.5% |
| 4zgnB00 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.61 | 46.0 | 4.37e-01 | 81.4% | 76.7% |
| 3zugB02 | 2.40.30.30 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like | 0.61 | 52.0 | 4.44e-01 | 96.5% | 67.6% |
| 3m1uA01 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.59 | 53.0 | 4.26e-01 | 100.0% | 59.1% |
| 1uisA00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.59 | 43.0 | 3.19e-01 | 76.7% | 89.7% |
| 3zn6A02 | 2.60.40.3410 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 46.0 | 4.61e-01 | 86.0% | 97.7% |
| 2o8lA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.56 | 44.0 | 4.24e-01 | 87.2% | 88.1% |
| 3qfgA00 | 2.60.40.1240 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 47.0 | 4.01e-01 | 95.3% | 85.5% |
| 2fn0B00 | 3.60.120.10 | Alpha Beta › 4-Layer Sandwich › Anthranilate synthase › Anthranilate synthase | 0.55 | 44.0 | 2.90e-01 | 88.4% | 39.6% |
| 7nn3B01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.55 | 39.0 | 2.73e-01 | 75.6% | 46.3% |
| 7plsA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.55 | 41.0 | 4.10e-01 | 97.7% | 78.5% |
| 3nrlA00 | 2.40.10.390 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.54 | 40.0 | 4.39e-01 | 96.5% | 100.0% |
| 3n6rA03 | 3.30.700.30 | Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › | 0.52 | 39.0 | 3.47e-01 | 81.4% | 87.2% |
| 1f0lA03 | 2.60.40.700 | Mainly Beta › Sandwich › Immunoglobulin-like › Diphtheria toxin, receptor-binding domain | 0.52 | 42.0 | 3.59e-01 | 93.0% | 61.0% |
| 4oumA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 40.0 | 3.58e-01 | 87.2% | 93.2% |
| 2q3xA00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.51 | 42.0 | 3.65e-01 | 93.0% | 90.8% |
| 3q48A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 39.0 | 4.05e-01 | 89.5% | 89.2% |
ECOD (79)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4026674 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.79 | 67.0 | 6.96e-01 | 97.7% | 96.2% |
| 3944437 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.75 | 65.0 | 6.74e-01 | 97.7% | 100.0% |
| 3712506 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.74 | 65.0 | 6.53e-01 | 100.0% | 95.3% |
| 5079674 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.74 | 60.0 | 6.37e-01 | 97.7% | 100.0% |
| 3850571 | 1.1.7.114 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › CATSPERB_head | 0.73 | 65.0 | 6.42e-01 | 96.5% | 98.9% |
| 4999166 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.72 | 58.0 | 6.20e-01 | 96.5% | 100.0% |
| 4518787 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.72 | 59.0 | 6.24e-01 | 90.7% | 100.0% |
| 3600462 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.72 | 58.0 | 5.99e-01 | 96.5% | 93.8% |
| 3561733 | 5.1.3.253 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › CATSPERB_head | 0.71 | 64.0 | 6.30e-01 | 97.7% | 96.7% |
| 3838931 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.71 | 54.0 | 5.83e-01 | 90.7% | 100.0% |
| 5046975 | 1.1.7.21 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RIBIOP_C | 0.70 | 57.0 | 5.95e-01 | 97.7% | 95.0% |
| 4496887 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.70 | 58.0 | 5.31e-01 | 97.7% | 69.1% |
| 4949140 | 1.1.7.13 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › TrmO | 0.70 | 58.0 | 5.78e-01 | 89.5% | 100.0% |
| 4366786 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.70 | 61.0 | 5.65e-01 | 97.7% | 92.7% |
| 4066146 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.70 | 57.0 | 5.29e-01 | 93.0% | 71.4% |
| 4883586 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.69 | 57.0 | 5.74e-01 | 88.4% | 88.4% |
| 5024154 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.69 | 58.0 | 5.86e-01 | 97.7% | 91.8% |
| 4147655 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.69 | 57.0 | 5.39e-01 | 97.7% | 76.0% |
| 4945251 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.69 | 57.0 | 5.40e-01 | 96.5% | 76.0% |
| 4338601 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.69 | 55.0 | 5.42e-01 | 97.7% | 81.1% |
| 4072878 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.69 | 58.0 | 6.06e-01 | 98.8% | 100.0% |
| 5000763 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.68 | 59.0 | 5.88e-01 | 95.3% | 100.0% |
| 5079180 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.68 | 60.0 | 5.93e-01 | 97.7% | 91.1% |
| 3596767 | 1.1.15.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like | 0.68 | 55.0 | 5.25e-01 | 88.4% | 95.0% |
| 4322439 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.68 | 54.0 | 5.00e-01 | 96.5% | 67.3% |
| 5044652 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.67 | 56.0 | 5.68e-01 | 97.7% | 91.8% |
| 4934153 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.67 | 58.0 | 5.66e-01 | 97.7% | 86.3% |
| 4995187 | 1.1.7.14 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › CTP-dep_RFKase | 0.67 | 57.0 | 5.12e-01 | 95.3% | 100.0% |
| 4995639 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.66 | 56.0 | 5.77e-01 | 94.2% | 98.8% |
| 4366483 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.66 | 57.0 | 5.74e-01 | 95.3% | 95.3% |
| 4638448 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.65 | 57.0 | 5.36e-01 | 96.5% | 80.0% |
| 4045917 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.65 | 57.0 | 5.14e-01 | 96.5% | 72.2% |
| 4245518 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.64 | 49.0 | 5.18e-01 | 89.5% | 96.0% |
| 4395103 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.64 | 56.0 | 5.54e-01 | 100.0% | 93.3% |
| 4529321 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.63 | 55.0 | 5.02e-01 | 96.5% | 80.0% |
| 4060488 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.63 | 52.0 | 5.34e-01 | 100.0% | 97.5% |
| 4581061 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.63 | 55.0 | 5.10e-01 | 96.5% | 82.7% |
| 3709965 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.63 | 56.0 | 5.16e-01 | 97.7% | 88.2% |
| 4328622 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.63 | 55.0 | 4.98e-01 | 96.5% | 79.1% |
| 4155389 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.63 | 55.0 | 5.05e-01 | 97.7% | 79.1% |
| 4159958 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.63 | 54.0 | 4.99e-01 | 95.3% | 81.8% |
| 4402448 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.63 | 54.0 | 4.88e-01 | 96.5% | 83.3% |
| 4952455 | 1.1.8.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › eIF2_C | 0.63 | 47.0 | 4.71e-01 | 80.2% | 83.1% |
| 4945827 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.63 | 47.0 | 4.68e-01 | 80.2% | 82.2% |
| 4215826 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.62 | 54.0 | 4.99e-01 | 96.5% | 80.9% |
| 4496370 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.62 | 53.0 | 4.74e-01 | 96.5% | 73.6% |
| 4391325 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.62 | 53.0 | 4.92e-01 | 96.5% | 82.7% |
| 4289955 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.60 | 51.0 | 4.72e-01 | 97.7% | 80.9% |
| 5038999 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.58 | 42.0 | 3.33e-01 | 96.5% | 33.5% |
| 3995394 | 11.1.1.12 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Filamin | 0.58 | 45.0 | 4.33e-01 | 83.7% | 92.0% |
| 5036977 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.57 | 42.0 | 3.37e-01 | 97.7% | 37.2% |
| 4928022 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 46.0 | 4.33e-01 | 91.9% | 80.7% |
| 3257735 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 45.0 | 4.18e-01 | 88.4% | 80.0% |
| 4957575 | 1.16.1.0 ↗ | beta barrels › cradle loop barrel › Baseplate wedge protein gp6 domain I › Baseplate wedge protein gp6 domain I | 0.56 | 43.0 | 4.43e-01 | 91.9% | 90.0% |
| 3264985 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 41.0 | 4.21e-01 | 88.4% | 85.0% |
| 3936263 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 44.0 | 4.07e-01 | 88.4% | 87.0% |
| 3392702 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.55 | 45.0 | 3.41e-01 | 97.7% | 36.3% |
| 3684935 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 44.0 | 3.92e-01 | 86.0% | 60.8% |
| 4059476 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 43.0 | 3.96e-01 | 88.4% | 68.3% |
| 3934321 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.55 | 40.0 | 3.12e-01 | 96.5% | 32.1% |
| 3730028 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 43.0 | 4.25e-01 | 86.0% | 81.1% |
| 3914116 | 11.1.1.711 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › FN3_IL27B_N | 0.54 | 43.0 | 4.29e-01 | 88.4% | 82.2% |
| 3738494 | 11.2.1.70 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2_Mug190_3rd | 0.54 | 39.0 | 3.35e-01 | 77.9% | 68.0% |
| 3389168 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.54 | 44.0 | 3.44e-01 | 93.0% | 45.9% |
| 3632354 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 41.0 | 4.10e-01 | 87.2% | 81.1% |
| 3267585 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 36.0 | 3.91e-01 | 75.6% | 88.6% |
| 5031981 | 4081.1.1.7 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Ribophorin_I | 0.53 | 40.0 | 3.30e-01 | 97.7% | 41.7% |
| 4992085 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.52 | 44.0 | 4.38e-01 | 100.0% | 96.7% |
| 3945597 | 11.1.1.252 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › bMG1 | 0.51 | 40.0 | 3.73e-01 | 87.2% | 67.3% |
| 4880247 | 11.1.5.10 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Diphtheria_R | 0.51 | 42.0 | 3.55e-01 | 93.0% | 61.7% |
| 3783233 | 4081.1.1.7 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Ribophorin_I | 0.51 | 41.0 | 3.21e-01 | 88.4% | 64.6% |
| 3466694 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.51 | 41.0 | 3.49e-01 | 86.0% | 82.1% |
| 3172237 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.51 | 42.0 | 3.23e-01 | 96.5% | 36.8% |
| 4955932 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.51 | 41.0 | 3.26e-01 | 91.9% | 46.2% |
| 3266205 | 11.1.1.29 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG | 0.51 | 40.0 | 3.89e-01 | 89.5% | 88.0% |
| 3618870 | 11.1.1.430 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TRAP-delta | 0.50 | 40.0 | 3.48e-01 | 90.7% | 60.0% |
| 3268381 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 37.0 | 3.67e-01 | 88.4% | 73.7% |
| 3622645 | 4184.1.1.2 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b | 0.50 | 42.0 | 4.17e-01 | 98.8% | 88.4% |
| 4636502 | 11.1.1.171 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_5 | 0.50 | 39.0 | 3.58e-01 | 89.5% | 66.4% |
D5
medium
residues 811-902
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1v5vA03 | 2.40.30.110 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains | 0.68 | 50.0 | 5.49e-01 | 98.9% | 96.0% |
| 2qf4A02 | 2.40.10.350 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Rod shape-determining protein MreC, domain 2 | 0.64 | 48.0 | 4.90e-01 | 89.1% | 81.3% |
| 2m5sA00 | 2.40.30.240 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.62 | 49.0 | 4.43e-01 | 84.8% | 75.0% |
| 1nkgA02 | 2.60.40.1120 | Mainly Beta › Sandwich › Immunoglobulin-like › Carboxypeptidase-like, regulatory domain | 0.60 | 44.0 | 4.57e-01 | 100.0% | 82.4% |
| 1iarB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 48.0 | 4.80e-01 | 98.9% | 84.4% |
| 7mjrA04 | 2.60.40.1790 | Mainly Beta › Sandwich › Immunoglobulin-like › Fungal immunomodulatory protein Fve | 0.59 | 43.0 | 4.38e-01 | 94.6% | 77.2% |
| 4wqmA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.58 | 43.0 | 4.25e-01 | 84.8% | 74.5% |
| 3okyA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 44.0 | 3.93e-01 | 96.7% | 56.3% |
| 6m3aA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 39.0 | 4.35e-01 | 93.5% | 100.0% |
| 2dlgA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 42.0 | 4.41e-01 | 95.7% | 91.3% |
| 5e55B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 44.0 | 4.46e-01 | 96.7% | 88.2% |
| 2d7nA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 41.0 | 4.43e-01 | 100.0% | 97.4% |
| 4eskC00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 40.0 | 3.93e-01 | 96.7% | 73.5% |
| 5e53A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 43.0 | 4.31e-01 | 96.7% | 88.2% |
| 1yt5A02 | 2.60.200.30 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › Probable inorganic polyphosphate/atp-NAD kinase; domain 2 | 0.52 | 42.0 | 3.88e-01 | 90.2% | 99.2% |
| 3dtdD00 | 2.60.40.1880 | Mainly Beta › Sandwich › Immunoglobulin-like › Invasion associated locus B (IalB) protein | 0.52 | 44.0 | 3.89e-01 | 97.8% | 81.4% |
| 3s9dD01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 42.0 | 4.19e-01 | 100.0% | 88.5% |
| 5iryA05 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.51 | 38.0 | 3.97e-01 | 98.9% | 88.2% |
| 3b2dC00 | 2.60.40.770 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 41.0 | 3.68e-01 | 91.3% | 86.3% |
ECOD (50)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3786245 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.70 | 58.0 | 6.09e-01 | 98.9% | 98.8% |
| 4497776 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.69 | 55.0 | 5.86e-01 | 96.7% | 98.8% |
| 5034907 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.68 | 54.0 | 5.37e-01 | 84.8% | 81.1% |
| 3385440 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.67 | 54.0 | 5.75e-01 | 97.8% | 97.5% |
| 3510907 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.67 | 56.0 | 5.77e-01 | 100.0% | 94.3% |
| 4248195 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.67 | 56.0 | 5.57e-01 | 100.0% | 88.4% |
| 3939997 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.67 | 56.0 | 5.64e-01 | 100.0% | 93.3% |
| 4398429 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.65 | 51.0 | 5.42e-01 | 97.8% | 98.8% |
| 4606097 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.64 | 53.0 | 5.57e-01 | 98.9% | 100.0% |
| 3390155 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.64 | 54.0 | 5.63e-01 | 98.9% | 100.0% |
| 4988964 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.64 | 53.0 | 5.48e-01 | 97.8% | 97.6% |
| 3599398 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.63 | 56.0 | 5.49e-01 | 100.0% | 90.0% |
| 3619934 | 11.1.1.260 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG_2 | 0.63 | 48.0 | 4.75e-01 | 97.8% | 76.0% |
| 3248954 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 48.0 | 4.80e-01 | 98.9% | 81.1% |
| 4934451 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.62 | 47.0 | 4.98e-01 | 98.9% | 92.5% |
| 3561340 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 46.0 | 4.60e-01 | 96.7% | 77.9% |
| 3754881 | 11.1.1.29 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG | 0.60 | 45.0 | 4.64e-01 | 96.7% | 82.2% |
| 3938246 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 46.0 | 4.85e-01 | 92.4% | 95.0% |
| 5023371 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.60 | 47.0 | 4.67e-01 | 84.8% | 82.1% |
| 3795417 | 1.1.8.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › euk_SelB_III | 0.59 | 53.0 | 4.93e-01 | 100.0% | 88.7% |
| 3271989 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 47.0 | 4.79e-01 | 96.7% | 90.0% |
| 3265707 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 43.0 | 4.40e-01 | 97.8% | 82.2% |
| 3259326 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 47.0 | 4.59e-01 | 97.8% | 84.0% |
| 3250327 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 45.0 | 4.39e-01 | 98.9% | 81.0% |
| 4956010 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 41.0 | 4.19e-01 | 95.7% | 80.0% |
| 3577095 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 43.0 | 4.29e-01 | 95.7% | 82.1% |
| 3921369 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.54 | 44.0 | 4.27e-01 | 100.0% | 80.0% |
| 5055089 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 41.0 | 4.10e-01 | 96.7% | 80.0% |
| 4874278 | 11.1.1.117 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › EpoR_lig-bind | 0.53 | 46.0 | 4.33e-01 | 97.8% | 97.4% |
| 3264188 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 45.0 | 4.27e-01 | 92.4% | 86.4% |
| 3753600 | 11.1.1.178 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_2 | 0.53 | 39.0 | 3.95e-01 | 95.7% | 78.9% |
| 3266467 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.53 | 45.0 | 4.21e-01 | 95.7% | 92.2% |
| 3290895 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.53 | 43.0 | 3.87e-01 | 89.1% | 90.0% |
| 3227984 | 11.1.1.29 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG | 0.52 | 43.0 | 4.25e-01 | 100.0% | 86.0% |
| 5045643 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 38.0 | 3.83e-01 | 95.7% | 75.8% |
| 4004071 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 41.0 | 3.59e-01 | 95.7% | 55.2% |
| 4037823 | 11.1.4.15 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Mfa2 | 0.52 | 44.0 | 3.98e-01 | 98.9% | 95.6% |
| 4978952 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 40.0 | 4.05e-01 | 95.7% | 83.2% |
| 5043293 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 39.0 | 3.82e-01 | 96.7% | 75.0% |
| 3606658 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 44.0 | 4.05e-01 | 96.7% | 72.8% |
| 4105457 | 11.1.1.90 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › IalB | 0.51 | 43.0 | 3.84e-01 | 96.7% | 81.1% |
| 3935249 | 11.1.1.955 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Fn3_Dep-1_4th | 0.51 | 42.0 | 4.13e-01 | 98.9% | 85.0% |
| 5079217 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 43.0 | 4.11e-01 | 92.4% | 85.7% |
| 3397959 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.51 | 42.0 | 3.91e-01 | 91.3% | 74.2% |
| 3798471 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 41.0 | 4.01e-01 | 100.0% | 81.0% |
| 5051722 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 40.0 | 3.92e-01 | 98.9% | 80.0% |
| 3966288 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 40.0 | 3.74e-01 | 87.0% | 100.0% |
| 3405188 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.50 | 43.0 | 4.20e-01 | 100.0% | 89.0% |
| 4938060 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 41.0 | 3.96e-01 | 95.7% | 80.0% |
| 5055396 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 40.0 | 3.85e-01 | 96.7% | 76.2% |
D6
medium
residues 1074-1149