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LacPavin_0818_WC40_scaffold_86355_prodigal-single.1__X__X__00058
Bact-VirLacPavin_0818_WC40_scaffold_86355_prodigal-single.1__X__X__00058
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 7-103_155-171
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13529.14 best | Peptidase_C39_2 | 35.5 | 1.80e-08 | 95.6% | 62.5% |
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3k8uA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.76 | 70.0 | 6.67e-01 | 97.4% | 98.5% |
| 4ry2A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.73 | 69.0 | 6.39e-01 | 100.0% | 91.5% |
| 1cv8A00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.70 | 66.0 | 5.62e-01 | 100.0% | 93.1% |
| 3zuaA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.65 | 59.0 | 5.62e-01 | 95.6% | 91.6% |
| 5efrA02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.58 | 36.0 | 4.34e-01 | 93.0% | 97.3% |
| 4hz9A00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.52 | 46.0 | 4.55e-01 | 100.0% | 93.2% |
| 2jhjA02 | 1.10.340.30 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 | 0.51 | 37.0 | 3.66e-01 | 75.4% | 94.2% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5035935 | 219.1.1.26 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Phytochelatin | 0.83 | 78.0 | 6.51e-01 | 100.0% | 94.6% |
| 3966783 | 219.1.1.77 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF3335 | 0.79 | 73.0 | 5.88e-01 | 98.2% | 97.6% |
| 3972041 | 219.1.1.51 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 | 0.77 | 73.0 | 6.43e-01 | 100.0% | 86.9% |
| 4261492 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.74 | 71.0 | 6.61e-01 | 100.0% | 91.9% |
| 3942751 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.57 | 30.0 | 2.98e-01 | 93.9% | 46.7% |
| 3816855 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.56 | 44.0 | 4.28e-01 | 82.5% | 88.0% |
| 5046672 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 31.0 | 3.16e-01 | 93.0% | 58.3% |
D2
medium
residues 104-154
Domain cluster:
representative
CATH (66)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2do3A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.79 | 51.0 | 5.16e-01 | 70.6% | 66.7% |
| 4ytlA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 48.0 | 4.90e-01 | 72.5% | 68.0% |
| 4kbmB01 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.74 | 50.0 | 4.91e-01 | 70.6% | 85.5% |
| 1b7tA02 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.74 | 49.0 | 4.92e-01 | 100.0% | 67.3% |
| 7u32F02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.74 | 49.0 | 4.93e-01 | 70.6% | 68.6% |
| 3goxA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 47.0 | 4.71e-01 | 70.6% | 66.7% |
| 2eczA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.72 | 47.0 | 4.29e-01 | 70.6% | 50.0% |
| 1x6gA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.70 | 50.0 | 4.31e-01 | 100.0% | 48.1% |
| 6bogA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 46.0 | 4.60e-01 | 70.6% | 67.3% |
| 2d9tA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 46.0 | 4.73e-01 | 72.5% | 73.5% |
| 7cfdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 45.0 | 4.00e-01 | 72.5% | 46.6% |
| 2ytyA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 47.0 | 3.97e-01 | 72.5% | 72.7% |
| 1lckA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.68 | 44.0 | 4.21e-01 | 70.6% | 55.9% |
| 6bhdA03 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 51.0 | 4.82e-01 | 96.1% | 66.7% |
| 6vlfA03 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.68 | 44.0 | 4.30e-01 | 70.6% | 58.6% |
| 4fw1A02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.68 | 44.0 | 4.39e-01 | 70.6% | 63.0% |
| 2c9oB02 | 2.40.50.360 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RuvBL1 DNA/RNA binding domain | 0.67 | 54.0 | 4.22e-01 | 90.2% | 49.6% |
| 1yn8A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.67 | 43.0 | 4.18e-01 | 70.6% | 57.6% |
| 1k1zA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.67 | 45.0 | 3.98e-01 | 70.6% | 46.2% |
| 1bkbA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.66 | 52.0 | 4.82e-01 | 86.3% | 84.6% |
| 4fssB00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.66 | 43.0 | 4.14e-01 | 70.6% | 55.7% |
| 2ckkA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 45.0 | 4.46e-01 | 72.5% | 67.9% |
| 1uebA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.66 | 52.0 | 4.87e-01 | 86.3% | 85.7% |
| 1x6bA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.66 | 43.0 | 4.04e-01 | 70.6% | 53.1% |
| 2yrvA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 45.0 | 3.48e-01 | 72.5% | 38.1% |
| 2cudA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.65 | 42.0 | 3.75e-01 | 70.6% | 43.0% |
| 2lt1A00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.65 | 44.0 | 3.91e-01 | 70.6% | 61.3% |
| 3a5zD02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.64 | 50.0 | 4.68e-01 | 86.3% | 85.9% |
| 1wfqA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.64 | 49.0 | 4.44e-01 | 86.3% | 83.6% |
| 4iupA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 44.0 | 3.97e-01 | 72.5% | 61.1% |
| 2v1qA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.64 | 42.0 | 4.07e-01 | 70.6% | 58.3% |
| 1fr3A00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.64 | 47.0 | 4.38e-01 | 82.4% | 70.1% |
| 1khcA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 43.0 | 4.02e-01 | 72.5% | 78.5% |
| 4c5eC02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 46.0 | 3.81e-01 | 100.0% | 42.7% |
| 2vnuD04 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 48.0 | 4.16e-01 | 84.3% | 89.9% |
| 3go5A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 51.0 | 4.68e-01 | 94.1% | 91.4% |
| 1ybyA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 50.0 | 4.66e-01 | 88.2% | 85.9% |
| 3ottB02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.62 | 47.0 | 2.91e-01 | 84.3% | 21.5% |
| 4c0dB00 | 2.30.30.1020 | Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain | 0.62 | 42.0 | 2.82e-01 | 70.6% | 22.5% |
| 1wu7A03 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.61 | 45.0 | 3.74e-01 | 80.4% | 94.8% |
| 3i35A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.61 | 40.0 | 3.98e-01 | 70.6% | 61.4% |
| 2e70A00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 50.0 | 4.50e-01 | 100.0% | 66.2% |
| 3rauA00 | 1.25.40.280 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › alix/aip1 like domains | 0.60 | 49.0 | 3.04e-01 | 100.0% | 92.5% |
| 2eifA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.60 | 49.0 | 4.67e-01 | 90.2% | 89.8% |
| 4xcmA02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.60 | 40.0 | 3.14e-01 | 70.6% | 35.0% |
| 2id0A04 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 48.0 | 4.03e-01 | 94.1% | 93.1% |
| 1g5hB02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.57 | 47.0 | 3.81e-01 | 98.0% | 96.3% |
| 3a54A01 | 2.40.50.340 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.57 | 45.0 | 3.81e-01 | 90.2% | 71.1% |
| 4pmwA04 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 45.0 | 3.82e-01 | 90.2% | 97.8% |
| 5cemA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.56 | 41.0 | 3.74e-01 | 82.4% | 90.4% |
| 6yllA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.56 | 44.0 | 3.84e-01 | 90.2% | 91.5% |
| 2eqkA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 45.0 | 4.07e-01 | 100.0% | 67.1% |
| 1vw5A00 | 3.30.70.1420 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Structure from the mobile metagenome of cole harbour salt marsh: integron cassette protein hfx_cass1 | 0.54 | 41.0 | 3.03e-01 | 88.2% | 79.5% |
| 2pn2A00 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.54 | 42.0 | 3.28e-01 | 96.1% | 89.1% |
| 2r7dA03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 41.0 | 4.02e-01 | 90.2% | 91.7% |
| 3v9fA02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 41.0 | 2.65e-01 | 92.2% | 50.3% |
| 1hczA02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.53 | 40.0 | 3.95e-01 | 88.2% | 89.8% |
| 4z48A00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.53 | 44.0 | 2.93e-01 | 100.0% | 62.1% |
| 2d9xA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 38.0 | 3.12e-01 | 82.4% | 40.0% |
| 6ctzA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.52 | 42.0 | 3.43e-01 | 88.2% | 82.8% |
| 1n27A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 40.0 | 3.41e-01 | 100.0% | 49.0% |
| 1x9mA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.52 | 35.0 | 2.39e-01 | 70.6% | 19.9% |
| 5iqaA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 40.0 | 3.28e-01 | 84.3% | 75.6% |
| 1b9mB02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.51 | 39.0 | 3.52e-01 | 84.3% | 68.1% |
| 3lzhA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 41.0 | 3.40e-01 | 88.2% | 83.5% |
| 1xfdA01 | 2.140.10.30 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain | 0.50 | 39.0 | 2.39e-01 | 100.0% | 34.5% |
ECOD (93)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3737349 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.85 | 55.0 | 5.36e-01 | 70.6% | 61.8% |
| 4975150 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.81 | 56.0 | 5.34e-01 | 72.5% | 61.7% |
| 4994957 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.81 | 55.0 | 5.36e-01 | 70.6% | 65.5% |
| 5058671 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.79 | 52.0 | 5.13e-01 | 70.6% | 63.6% |
| 4946165 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.78 | 53.0 | 5.18e-01 | 70.6% | 65.5% |
| 3765274 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.77 | 52.0 | 4.27e-01 | 72.5% | 40.0% |
| 3923813 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.77 | 49.0 | 4.50e-01 | 70.6% | 50.8% |
| 5025079 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 51.0 | 5.03e-01 | 70.6% | 67.3% |
| 3240406 | 4.1.1.347 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5, KOW6_SPT5 | 0.76 | 49.0 | 3.76e-01 | 72.5% | 29.6% |
| 4963650 | 4.1.1.488 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7346 | 0.75 | 49.0 | 4.78e-01 | 70.6% | 61.8% |
| 3261395 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 49.0 | 4.75e-01 | 72.5% | 60.3% |
| 3581611 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 48.0 | 4.89e-01 | 72.5% | 68.0% |
| 4952887 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 50.0 | 4.92e-01 | 70.6% | 65.5% |
| 3398093 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.74 | 49.0 | 4.66e-01 | 72.5% | 58.3% |
| 4031670 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.74 | 48.0 | 4.56e-01 | 70.6% | 56.7% |
| 5028078 | 5090.1.1.0 ↗ | beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains | 0.74 | 56.0 | 3.51e-01 | 84.3% | 63.9% |
| 5013117 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 57.0 | 5.37e-01 | 88.2% | 83.1% |
| 5079023 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 49.0 | 5.20e-01 | 70.6% | 88.9% |
| 5017134 | 208.1.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › Hexapep | 0.73 | 49.0 | 3.28e-01 | 70.6% | 17.9% |
| 3358753 | 4.1.1.381 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5, KOW4_SPT5 | 0.73 | 48.0 | 3.35e-01 | 72.5% | 21.2% |
| 4990212 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 49.0 | 4.79e-01 | 70.6% | 67.3% |
| 4992872 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 48.0 | 4.77e-01 | 70.6% | 69.1% |
| 3506279 | 4.1.1.112 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_1_RapA | 0.71 | 48.0 | 4.70e-01 | 72.5% | 65.5% |
| 4000280 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 46.0 | 4.53e-01 | 70.6% | 61.8% |
| 3877485 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.70 | 47.0 | 3.98e-01 | 72.5% | 41.2% |
| 5072324 | 101.1.2.70 ↗ | alpha arrays › HTH › HTH › winged helix domain › PqqD | 0.69 | 53.0 | 4.39e-01 | 86.3% | 69.5% |
| 5011618 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 53.0 | 3.96e-01 | 88.2% | 59.3% |
| 4000532 | 2.1.1.81 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rrp44_S1 | 0.68 | 46.0 | 3.92e-01 | 70.6% | 91.8% |
| 5032233 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 59.0 | 4.56e-01 | 98.0% | 72.2% |
| 3910433 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 48.0 | 4.44e-01 | 74.5% | 58.5% |
| 3738728 | 2.1.1.89 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dis3l2_C_term | 0.68 | 47.0 | 3.90e-01 | 74.5% | 88.4% |
| 3578855 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 43.0 | 3.77e-01 | 70.6% | 41.2% |
| 3253321 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.67 | 52.0 | 4.78e-01 | 84.3% | 92.3% |
| 3600862 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.67 | 47.0 | 4.13e-01 | 76.5% | 83.7% |
| 3487990 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.67 | 51.0 | 3.96e-01 | 84.3% | 85.2% |
| 5002450 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.67 | 52.0 | 5.09e-01 | 84.3% | 92.7% |
| 338 | 2.1.1.13 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-5a | 0.66 | 52.0 | 4.82e-01 | 86.3% | 84.6% |
| 4950397 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.66 | 52.0 | 5.08e-01 | 84.3% | 96.4% |
| 4161636 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.65 | 51.0 | 4.77e-01 | 86.3% | 86.2% |
| 4935682 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.65 | 51.0 | 4.98e-01 | 84.3% | 85.5% |
| 4168836 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.65 | 52.0 | 4.70e-01 | 88.2% | 82.9% |
| 4100221 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.64 | 51.0 | 4.70e-01 | 86.3% | 84.6% |
| 4678731 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.64 | 52.0 | 4.76e-01 | 86.3% | 84.6% |
| 4972824 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.64 | 50.0 | 4.89e-01 | 84.3% | 90.9% |
| 4039724 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.64 | 50.0 | 4.68e-01 | 86.3% | 84.6% |
| 4358761 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.64 | 50.0 | 4.69e-01 | 86.3% | 84.6% |
| 4670334 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.64 | 51.0 | 4.69e-01 | 86.3% | 86.2% |
| 4453243 | 2.1.1.219 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_cyt-4 | 0.64 | 50.0 | 4.23e-01 | 86.3% | 74.1% |
| 4252940 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.64 | 51.0 | 4.74e-01 | 88.2% | 86.2% |
| 3791430 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 42.0 | 4.19e-01 | 72.5% | 61.8% |
| 4167626 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.63 | 49.0 | 4.60e-01 | 86.3% | 84.6% |
| 4972486 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.63 | 50.0 | 4.87e-01 | 86.3% | 92.7% |
| 4425795 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.63 | 49.0 | 4.59e-01 | 86.3% | 86.2% |
| 4927852 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 54.0 | 4.53e-01 | 100.0% | 93.3% |
| 4930180 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.63 | 49.0 | 4.82e-01 | 86.3% | 92.7% |
| 4059146 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.63 | 49.0 | 4.59e-01 | 86.3% | 84.6% |
| 5080835 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.63 | 51.0 | 5.03e-01 | 90.2% | 92.7% |
| 4975151 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.63 | 49.0 | 4.84e-01 | 86.3% | 85.5% |
| 4184764 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.63 | 49.0 | 4.51e-01 | 84.3% | 86.2% |
| None | — | 0.62 | 51.0 | 2.83e-01 | 96.1% | 77.3% | |
| 4992873 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.62 | 49.0 | 4.71e-01 | 86.3% | 87.9% |
| 5065152 | 4333.1.1.0 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain | 0.62 | 54.0 | 3.34e-01 | 100.0% | 44.8% |
| 4945673 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.62 | 48.0 | 4.52e-01 | 86.3% | 84.4% |
| 5024595 | 4333.1.1.2 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › TaqI_C | 0.62 | 52.0 | 3.24e-01 | 100.0% | 48.1% |
| 3948516 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.62 | 48.0 | 4.43e-01 | 84.3% | 89.2% |
| 5001065 | 4333.1.1.0 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain | 0.61 | 53.0 | 3.28e-01 | 100.0% | 44.7% |
| 4579534 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.61 | 50.0 | 4.63e-01 | 88.2% | 84.6% |
| 4254219 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.61 | 48.0 | 4.45e-01 | 86.3% | 81.5% |
| 4952888 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.61 | 50.0 | 4.95e-01 | 90.2% | 96.4% |
| 4032291 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.61 | 48.0 | 4.43e-01 | 86.3% | 86.2% |
| 4050524 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.61 | 49.0 | 4.56e-01 | 88.2% | 84.6% |
| 4947996 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.61 | 48.0 | 4.69e-01 | 86.3% | 90.9% |
| 4582456 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.61 | 48.0 | 4.37e-01 | 86.3% | 81.4% |
| 5072502 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.61 | 48.0 | 4.62e-01 | 86.3% | 87.9% |
| 4433263 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.61 | 48.0 | 4.47e-01 | 86.3% | 84.6% |
| 3233742 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.61 | 51.0 | 4.34e-01 | 98.0% | 80.0% |
| 4999847 | 4333.1.1.0 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain | 0.61 | 53.0 | 3.27e-01 | 100.0% | 47.4% |
| 3317544 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.60 | 48.0 | 4.46e-01 | 88.2% | 84.6% |
| 4000809 | 2.1.1.89 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dis3l2_C_term | 0.60 | 46.0 | 3.85e-01 | 86.3% | 85.3% |
| 5017215 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 48.0 | 4.77e-01 | 90.2% | 92.7% |
| 5078789 | 4333.1.1.8 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › N6_Mtase | 0.59 | 50.0 | 2.88e-01 | 100.0% | 23.4% |
| 3586203 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.58 | 46.0 | 4.27e-01 | 88.2% | 75.4% |
| 4429356 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.58 | 50.0 | 4.71e-01 | 100.0% | 93.8% |
| 3740511 | 2.1.1.89 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dis3l2_C_term | 0.58 | 44.0 | 3.68e-01 | 84.3% | 75.6% |
| 3604264 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 47.0 | 3.89e-01 | 94.1% | 75.0% |
| 4886650 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.58 | 42.0 | 3.69e-01 | 82.4% | 97.6% |
| 3834266 | 2.1.1.89 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dis3l2_C_term | 0.57 | 46.0 | 3.91e-01 | 90.2% | 94.0% |
| 3258814 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.55 | 48.0 | 3.84e-01 | 100.0% | 97.1% |
| 4043601 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.55 | 48.0 | 4.49e-01 | 100.0% | 92.3% |
| 3592754 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.55 | 48.0 | 3.69e-01 | 100.0% | 79.8% |
| 3381974 | 2003.1.2.47 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NDH2_C | 0.53 | 47.0 | 3.05e-01 | 100.0% | 72.9% |
| 3606532 | 2484.6.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Periplasmic domain of ExbD/TolR › Periplasmic domain of ExbD/TolR | 0.52 | 38.0 | 3.28e-01 | 78.4% | 46.7% |
| 4481603 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.52 | 44.0 | 3.89e-01 | 100.0% | 73.8% |