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LacPavin_0818_WC40_scaffold_86355_prodigal-single.1__X__X__00123
Bact-VirLacPavin_0818_WC40_scaffold_86355_prodigal-single.1__X__X__00123
Identity
- Kingdom:
- phage
Quality
96.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-57
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1chkA02 | 3.30.386.10 | Alpha Beta › 2-Layer Sandwich › Chitosanase; Chain A, domain 2 › Chitosanase, subunit A, domain 2 | 0.62 | 45.0 | 3.83e-01 | 80.0% | 100.0% |
| 3fd9A01 | 1.10.8.520 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › ExsD N-terminal domain-like | 0.58 | 48.0 | 4.51e-01 | 100.0% | 81.9% |
| 1wkbA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.53 | 44.0 | 2.68e-01 | 100.0% | 48.1% |
| 1a87A02 | 1.10.490.30 | Mainly Alpha › Orthogonal Bundle › Globin-like › Colicin | 0.53 | 42.0 | 3.05e-01 | 100.0% | 94.5% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4364808 | 3608.1.1.1 ↗ | alpha bundles › Surface antigen HP0197 N-terminal domain › Surface antigen HP0197 N-terminal domain › Surface antigen HP0197 N-terminal domain › GAGBD | 0.66 | 49.0 | 3.51e-01 | 80.0% | 49.7% |
| 3750083 | 142.1.1.17 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › SPATIAL | 0.65 | 53.0 | 5.20e-01 | 94.5% | 100.0% |
| None | — | 0.55 | 40.0 | 2.92e-01 | 94.5% | 29.0% | |
| 3475801 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.50 | 41.0 | 3.50e-01 | 96.4% | 63.0% |